FFCP PHASE1:Hg19::chr7:18330064..18330080,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9734 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14065 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000474742_5end | |||
|coexpression_cluster_id=C813 | |||
|description=CAGE_peak_3_at_HDAC9_5end | |||
|id=chr7:18330064..18330080,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.20e-62!172;CL:0000566!1.20e-62!172;CL:0000738!4.84e-60!140;CL:0002032!2.12e-56!165;CL:0000837!2.12e-56!165;CL:0000988!4.98e-56!182;CL:0002087!4.05e-51!119;CL:0002031!2.78e-49!124;CL:0000763!7.67e-38!112;CL:0000049!7.67e-38!112;CL:0000766!8.10e-36!76;CL:0000557!1.66e-35!71;CL:0002009!6.00e-34!65;CL:0002194!1.52e-32!63;CL:0000576!1.52e-32!63;CL:0000040!1.52e-32!63;CL:0000559!1.52e-32!63;CL:0000839!1.58e-31!70;CL:0002057!1.18e-27!42;CL:0000860!1.50e-24!45;CL:0000542!8.80e-16!53;CL:0000051!8.80e-16!53;CL:0000838!1.67e-15!52;CL:0000134!1.37e-10!358;CL:0000236!4.15e-10!14;CL:0002320!1.31e-09!365;CL:0000945!3.56e-09!24;CL:0000826!3.56e-09!24;CL:0002393!4.16e-09!9;CL:0002397!4.16e-09!9;CL:0000219!7.28e-08!390;CL:0000451!1.49e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.02e-24;48!CL:0000860;3.18e-22;33!CL:0002057;3.18e-22;33!CL:0000473;1.62e-20;39!CL:0000234;1.62e-20;39!CL:0000766;1.20e-16;69!CL:0002087;1.43e-15;104!CL:0000738;2.08e-13;136!CL:0000763;2.83e-12;100!CL:0000236;5.05e-11;13!CL:0000988;6.67e-10;177!CL:0000542;1.48e-08;53!CL:0000945;2.41e-08;24!CL:0002393;9.88e-08;6!CL:0002397;9.88e-08;6!CL:0000840;5.67e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.42e-61,168;CL:0000738,9.07e-59,136;CL:0002087,5.08e-58,115;CL:0000988,2.92e-56,177;CL:0002032,1.83e-54,161;CL:0000837,1.83e-54,161;CL:0002031,3.93e-51,120;CL:0002009,1.61e-45,61;CL:0002194,9.40e-44,59;CL:0000576,9.40e-44,59;CL:0000040,9.40e-44,59;CL:0000559,9.40e-44,59;CL:0000557,1.90e-41,67;CL:0000766,1.24e-39,72;CL:0000763,7.10e-39,108;CL:0000049,7.10e-39,108;CL:0000839,7.80e-37,66;CL:0000473,3.47e-36,48;CL:0000234,3.47e-36,48;CL:0000860,8.51e-34,42;CL:0002057,8.51e-34,42;CL:0000542,1.76e-13,53;CL:0000051,1.76e-13,53;CL:0000838,3.75e-13,52;CL:0000134,1.97e-11,354;CL:0002393,7.09e-11,9;CL:0002397,7.09e-11,9;CL:0002320,1.39e-10,361;CL:0000236,6.00e-10,14;CL:0000945,2.41e-08,24;CL:0000826,2.41e-08,24;CL:0000219,9.96e-08,386;CL:0000840,5.17e-07,5;CL:0001029,5.17e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;7.52e-24;42!CL:0000049;3.24e-11;108!CL:0000051;1.48e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,9.85e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.67e-39!102;UBERON:0003061!2.67e-39!102;UBERON:0002193!3.90e-35!112;UBERON:0002371!6.81e-30!80;UBERON:0001474!1.36e-26!86;UBERON:0007023!1.22e-24!115;UBERON:0002405!9.41e-23!115;UBERON:0004765!3.44e-20!101;UBERON:0001434!3.44e-20!101;UBERON:0003081!1.02e-09!216;UBERON:0002384!5.13e-09!375;UBERON:0000178!2.93e-07!15;UBERON:0000179!2.93e-07!15;UBERON:0000463!2.93e-07!15;UBERON:0001049!4.53e-07!57;UBERON:0005068!4.53e-07!57;UBERON:0006241!4.53e-07!57;UBERON:0007135!4.53e-07!57;UBERON:0002204!5.70e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.80e-09;15!UBERON:0000179;4.80e-09;15!UBERON:0000463;4.80e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.40e-48,98;UBERON:0003061,9.40e-48,98;UBERON:0002193,1.59e-43,108;UBERON:0002371,1.32e-35,76;UBERON:0002405,4.42e-35,93;UBERON:0001474,2.34e-31,82;UBERON:0004765,1.28e-26,90;UBERON:0001434,1.03e-22,100;UBERON:0007023,5.23e-20,114;UBERON:0003081,1.99e-14,203;UBERON:0002384,6.41e-10,371;UBERON:0000178,5.01e-09,15;UBERON:0000179,5.01e-09,15;UBERON:0000463,5.01e-09,15;UBERON:0002204,3.58e-08,167;UBERON:0000479,8.08e-08,773 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,7.79416738629103,7.06065069269533,7.47752422479953,10.2274711980715,17.2723229143746,28.1765344435258,0,0,0,0.46480320348181,0.142169232487422,32.0024478874983,37.6716877801677,26.2713226185886,12.3696196308036,13.2110129801555,11.6601719766833,10.8181738406358,3.34415949192999,3.77875943688809,4.36651310138069,2.32429036905685,5.75635043230556,6.19412741790207,3.16461631554365,3.84241059793651,8.27687804610048,6.55016793399575,5.80936215225443,8.12558919566051,3.76484679085209,2.72906150057846,6.51698104890745,5.20342617030534,7.70229664982625,10.2293940127847,2.96866170168044,3.98927315243264,5.54092175692502,7.54544020434318,10.7803192691317,6.85104473895132,4.27122730936464,5.21482918420201,12.1625753034865,5.44859552370032,19.5187147073409,21.2029799585393,62.1090541757109,59.5292039902122,47.1731952393846,75.0355256058587,95.9630345257225,83.4165794957846,48.167153692271,53.9064195209534,34.7061892152804,59.8387231168497,95.574256970873,114.746693748399,105.402364973927,86.0851372127427,88.5118757529904,96.5125514265899,88.7269991717889,78.5513897371039,26.4256735216922,37.8450495843977,17.1822727152734,6.72610275577843,22.6510312906566,0.590129310341499,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0.267540828089713,0,0.339928028092699,3.83220493601921,0.34362744548263,3.54227568827304,1.59282707162048,0.651083453856419,2.85135613334512,10.6908334545219,10.6228887258167,6.24653632761729,3.55165878066025,5.74789597844733,9.27391018833769,5.34880391567015,1.15859523106239,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,1.70272798147026,0,0,22.0692227685185,21.0696982132113,7.71156171009418,77.5094528992361,80.651282419998,70.9483827539469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31710916013264,90.4999353800034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38651018262192,3.7440682422278,0.743155811443641,0,0,0,0,0,0,0.492663237895943,0.792435906119034,0.414656231081544,0.432359860250884,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,6.08118903205952,5.52482800575339,8.43335757932127,0,0,0,0,0,0,3.6988097517864,16.7476146171638,4.31255149719035,5.39040752374943,0.254094624222463,0,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.6016678661873,12.7271378482984,17.6100470375683,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32772248920434,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0,0,0,0,0,0,0,5.64862804660675,0,0,0,0,9.13405696617905,14.5281069357051,15.3804740537024,27.3966541776457,31.2635327545508,11.0240462902762,12.9607544937148,6.34500141035416,0,0,0,1.30062222588003,0,4.62421981764692,9.40615009100052,2.3949524571938,4.97913962344153,31.5393638258585,13.3094995512568,1.96558024679421,44.5057624114725,0,0,3.04725200042886,9.79587258132567,16.7493756968569,23.8473893106583,8.58763361889412,23.0430573231343,34.2224445075396,26.1953152487696,1.9538809540204,0,0,0.270455678475983,9.65908707193678,0,0,15.6763751820927,0,0,0,0,0.890894042497916,0,1.9882952955326,5.90811548924153,0,0,0,2.78947183551498,6.90709788827869,0,0,0,0,0,0,5.62729607249559,2.17015492401254,11.974154617347,0,0,1.76259386507517,0,0,0,2.89999830173917,0,0,0,0,0,0,0,3.0149109656352,0,1.10579259931225,0.295547618953547,1.09692698576986,0,0,3.77056266668606,0,0,0,0,0,0,0.533034776018635,7.15353087370155,0.784901281975124,0,0,0,0,0,0.317873157960757,0,0,0,0.432777279484182,0,2.21143911258348,2.4441205797345,0,0,0,3.16785325009182,4.01288823649394,3.04543779442941,0.182454789215666,0,0,1.97292201424695,4.83962864194656,0.30607276163049,6.63459086099124,0,0,0,0,0,0,0,0,0,0,0,3.14508002835654,0,0,0,0,2.13375836274523,0,0.225980740780532,0,0,1.70939149080872,0,0,2.56143593687223,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0.600420288709789,9.30956576465553,56.2084987494678,0,0,1.67569440763353,2.06244381610515,0,0.798716001995964,0,1.33902874465124,4.23255876666375,0,0,0,0,0,2.55911451938347,7.19723322559168,0,5.5843396505746,0,0,0,15.5231985170535,6.96421759102155,1.51873891645062,0,2.28536551167675,0.524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,1.02586563574658,1.32506888912221,0.387848869084652,6.34716488364912,0,0,4.16470909014009,6.28817220398664,3.31391244277756,6.94632430536731,0,0,0,2.72008901684737,4.7631079864313,0.919036730290385,2.95085367638824,0,0,0.244052529803926,3.3801551290755,0,7.0994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| |||
|short_description=p3@HDAC9 | |||
}} |
Revision as of 15:51, 22 January 2014
Short description: | p3@HDAC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HDAC9_5end |
Coexpression cluster: | C813_CD19_CD14CD16_CD14_Macrophage_Monocytederived_pancreatic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000474742_5end |
EntrezGene: | HDAC9 |
HGNC: | 14065 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.40e-48 | 98 |
blood island | 9.40e-48 | 98 |
hemolymphoid system | 1.59e-43 | 108 |
bone marrow | 1.32e-35 | 76 |
immune system | 4.42e-35 | 93 |
bone element | 2.34e-31 | 82 |
skeletal element | 1.28e-26 | 90 |
skeletal system | 1.03e-22 | 100 |
adult organism | 5.23e-20 | 114 |
lateral plate mesoderm | 1.99e-14 | 203 |
connective tissue | 6.41e-10 | 371 |
blood | 5.01e-09 | 15 |
haemolymphatic fluid | 5.01e-09 | 15 |
organism substance | 5.01e-09 | 15 |
musculoskeletal system | 3.58e-08 | 167 |
tissue | 8.08e-08 | 773 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.85e-07 | 39 |