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{{CL
{{CL
|id=CL:0002251
|alt_id=
|name=epithelial cell of alimentary canal
|namespace=cell
|def="An epithelial cell of the musculomembranous digestive tube extending from the mouth to the anus." [GOC:tfm, ISBN:0721662544]
|xref=
|is_a=CL:0002076
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-09-08T09:26:53Z
|def="An epithelial cell of the musculomembranous digestive tube extending from the mouth to the anus." [GOC:tfm, ISBN:0721662544]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002251
|is_a=CL:0002076
|is_obsolete=
|located_in=
|located_in=
|name=epithelial cell of alimentary canal
|namespace=FANTOM
|obo_creation_date=2010-09-08T09:26:53Z
|part_of=UBERON:0001555
|part_of=UBERON:0001555
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:41, 12 September 2014

Name:epithelial cell of alimentary canal
Namespace:FANTOM
Definition:"An epithelial cell of the musculomembranous digestive tube extending from the mouth to the anus." [GOC:tfm, ISBN:0721662544]
Created by:tmeehan
Creation date:2010-09-08T09:26:53Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002076(endo-epithelial cell)
part_of:UBERON:0001555(digestive tract)



Children


is a:CL:0000682 (M cell of gut),CL:0002166 (epithelial cell of Malassez),CL:0002170 (keratinized cell of the oral mucosa),CL:0002178 (epithelial cell of stomach),CL:0002252 (epithelial cell of esophagus),CL:0002563 (intestinal epithelial cell),CL:0002621 (gingival epithelial cell),CL:1001596 (salivary gland glandular cell)
derives from:FF:0100790 (pharyngeal cancer cell line sample),FF:0102211 (oral squamous cell carcinoma cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002251 (epithelial cell of alimentary canal), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.97e-77FFCP PHASE2:Mm9::chr8:122335239..122335244,+#_3a9ebee0556296f778917fc9cd4dfcf9p@chr8:122335239..122335244, +
4.97e-77FFCP PHASE1:Mm9::chr8:122335239..122335244,+#_3a9ebee0556296f778917fc9cd4dfcf9p@chr8:122335239..122335244, +
1.86e-71FFCP PHASE1:Mm9::chr17:57201412..57201418,-#_5d02c5c8aa69521d457f0d58a0ff29b4p@chr17:57201412..57201418, -
1.86e-71FFCP PHASE2:Mm9::chr17:57201412..57201418,-#_5d02c5c8aa69521d457f0d58a0ff29b4p@chr17:57201412..57201418, -
1.41e-68FFCP PHASE2:Mm9::chr4:155434167..155434177,+#_246a2bb74098783258fc3993abba0a1cp@chr4:155434167..155434177, +
1.41e-68FFCP PHASE1:Mm9::chr4:155434167..155434177,+#_246a2bb74098783258fc3993abba0a1cp@chr4:155434167..155434177, +
1.7e-67FFCP PHASE1:Mm9::chr8:64192378..64192389,+#_f26a716760003c7f800e870b6a6e30fdp@chr8:64192378..64192389, +
1.7e-67FFCP PHASE2:Mm9::chr8:64192378..64192389,+#_f26a716760003c7f800e870b6a6e30fdp@chr8:64192378..64192389, +
3.55e-65FFCP PHASE1:Mm9::chr3:122215917..122215967,-#_b3d941adc66253b176faef24dc04ca4ep@chr3:122215917..122215967, -
3.55e-65FFCP PHASE2:Mm9::chr3:122215917..122215967,-#_b3d941adc66253b176faef24dc04ca4ep@chr3:122215917..122215967, -
7.03e-65FFCP PHASE2:Mm9::chr2:143738263..143738267,+#_f09c207864714499e3e319391f8c76c5p@chr2:143738263..143738267, +
7.03e-65FFCP PHASE1:Mm9::chr2:143738263..143738267,+#_f09c207864714499e3e319391f8c76c5p@chr2:143738263..143738267, +
2.43e-61FFCP PHASE1:Mm9::chr5:135465906..135465912,+#_a0c04cb8f39c5e6a841464b526d935fcp@chr5:135465906..135465912, +
2.43e-61FFCP PHASE2:Mm9::chr5:135465906..135465912,+#_a0c04cb8f39c5e6a841464b526d935fcp@chr5:135465906..135465912, +
5.84e-61FFCP PHASE2:Mm9::chr7:4101973..4101978,-#_060aecfe905d7a00355849df980ffa6cp4@Leng9
5.84e-61FFCP PHASE1:Mm9::chr7:4101973..4101978,-#_060aecfe905d7a00355849df980ffa6cp4@Leng9
1.29e-60FFCP PHASE1:Mm9::chr7:4101821..4101832,-#_5bd62426d8b559d69a07f664a203c12fp5@Leng9
1.29e-60FFCP PHASE2:Mm9::chr7:4101821..4101832,-#_5bd62426d8b559d69a07f664a203c12fp5@Leng9
5.24e-58FFCP PHASE2:Mm9::chr12:86771033..86771037,-#_2bd04d55fb31ab8494cc70b51d84b91bp@chr12:86771033..86771037, -
5.24e-58FFCP PHASE1:Mm9::chr12:86771033..86771037,-#_2bd04d55fb31ab8494cc70b51d84b91bp@chr12:86771033..86771037, -
6.35e-57FFCP PHASE1:Mm9::chr5:145119593..145119596,+#_2a9ce5bd45b9947bc72db8d2be5ab83ap@chr5:145119593..145119596, +
6.35e-57FFCP PHASE2:Mm9::chr5:145119593..145119596,+#_2a9ce5bd45b9947bc72db8d2be5ab83ap@chr5:145119593..145119596, +
8.86e-57FFCP PHASE2:Mm9::chr13:49066571..49066574,-#_4f03b4768131b90941d66160fcca9d85p@chr13:49066571..49066574, -
8.86e-57FFCP PHASE1:Mm9::chr13:49066571..49066574,-#_4f03b4768131b90941d66160fcca9d85p@chr13:49066571..49066574, -
1.46e-56FFCP PHASE1:Mm9::chr11:96797681..96797709,-#_26a90e2028d475db2244826dc5778abdp@chr11:96797681..96797709, -
1.46e-56FFCP PHASE2:Mm9::chr11:96797681..96797709,-#_26a90e2028d475db2244826dc5778abdp@chr11:96797681..96797709, -
2.19e-56FFCP PHASE2:Mm9::chr18:36576247..36576252,-#_2a3c7895fb51207223985eb4a3cdfc26p@chr18:36576247..36576252, -
2.19e-56FFCP PHASE1:Mm9::chr18:36576247..36576252,-#_2a3c7895fb51207223985eb4a3cdfc26p@chr18:36576247..36576252, -
5.47e-56FFCP PHASE1:Mm9::chr9:66888939..66888949,+#_51b116bc23c22c7c9dce2ed70cb709e6p@chr9:66888939..66888949, +
5.47e-56FFCP PHASE2:Mm9::chr9:66888939..66888949,+#_51b116bc23c22c7c9dce2ed70cb709e6p@chr9:66888939..66888949, +
6.45e-56FFCP PHASE2:Mm9::chr17:46693370..46693378,+#_3645da7113330ba5e5b36700c464f5b6p@chr17:46693370..46693378, +
6.45e-56FFCP PHASE1:Mm9::chr17:46693370..46693378,+#_3645da7113330ba5e5b36700c464f5b6p@chr17:46693370..46693378, +
1.93e-53FFCP PHASE2:Mm9::chr7:52317191..52317193,+#_380eaa359cac613b23ec468af994f76bp@chr7:52317191..52317193, +
1.93e-53FFCP PHASE1:Mm9::chr7:52317191..52317193,+#_380eaa359cac613b23ec468af994f76bp@chr7:52317191..52317193, +
2.55e-53FFCP PHASE2:Mm9::chr5:135442713..135442733,+#_332b4e3d9494ece360e762e2df53615bp@chr5:135442713..135442733, +
2.55e-53FFCP PHASE1:Mm9::chr5:135442713..135442733,+#_332b4e3d9494ece360e762e2df53615bp@chr5:135442713..135442733, +
5.3e-53FFCP PHASE2:Mm9::chr2:38781010..38781017,+#_26e06edb5ab79d651312768d83740430p@chr2:38781010..38781017, +
5.3e-53FFCP PHASE1:Mm9::chr2:38781010..38781017,+#_26e06edb5ab79d651312768d83740430p@chr2:38781010..38781017, +
3.46e-52FFCP PHASE1:Mm9::chr10:80565428..80565433,+#_b1778979f87b23e85b38f9cf494d639fp@chr10:80565428..80565433, +
3.46e-52FFCP PHASE2:Mm9::chr10:80565428..80565433,+#_b1778979f87b23e85b38f9cf494d639fp@chr10:80565428..80565433, +
7.4e-52FFCP PHASE2:Mm9::chr11:35759012..35759018,+#_dce7fcfe662a63012c60b3e39f192fb5p@chr11:35759012..35759018, +
7.4e-52FFCP PHASE1:Mm9::chr11:35759012..35759018,+#_dce7fcfe662a63012c60b3e39f192fb5p@chr11:35759012..35759018, +
1.0e-51FFCP PHASE1:Mm9::chr18:66636209..66636215,-#_c482f06dc2514759290098b243507e81p@chr18:66636209..66636215, -
1.0e-51FFCP PHASE2:Mm9::chr18:66636209..66636215,-#_c482f06dc2514759290098b243507e81p@chr18:66636209..66636215, -
1.17e-51FFCP PHASE1:Mm9::chr16:78268076..78268083,-#_7cc88e135be484e96145e33649845d89p@chr16:78268076..78268083, -
1.17e-51FFCP PHASE2:Mm9::chr16:78268076..78268083,-#_7cc88e135be484e96145e33649845d89p@chr16:78268076..78268083, -
3.47e-50FFCP PHASE2:Mm9::chr16:30055801..30055806,+#_36f505cdc1229077edb4ae42937fddc3p@chr16:30055801..30055806, +
3.47e-50FFCP PHASE1:Mm9::chr16:30055801..30055806,+#_36f505cdc1229077edb4ae42937fddc3p@chr16:30055801..30055806, +
5.12e-50FFCP PHASE1:Mm9::chr7:19814309..19814320,+#_25049529acb9f90fc94af16a89ac4ab5p@chr7:19814309..19814320, +
5.12e-50FFCP PHASE2:Mm9::chr7:19814309..19814320,+#_25049529acb9f90fc94af16a89ac4ab5p@chr7:19814309..19814320, +
7.55e-50FFCP PHASE1:Mm9::chr16:91548532..91548555,-#_3ab727e27d8a1741e54e06327746e96cp@chr16:91548532..91548555, -
7.55e-50FFCP PHASE2:Mm9::chr16:91548532..91548555,-#_3ab727e27d8a1741e54e06327746e96cp@chr16:91548532..91548555, -
3.13e-49FFCP PHASE2:Mm9::chr15:77670701..77670706,+#_d4ad94c65ccaac812906da414ae60bb0p@chr15:77670701..77670706, +
3.13e-49FFCP PHASE1:Mm9::chr15:77670701..77670706,+#_d4ad94c65ccaac812906da414ae60bb0p@chr15:77670701..77670706, +
1.47e-48FFCP PHASE1:Mm9::chr5:32270354..32270364,-#_3d40ab8965de1f99e36a92967a0911d3p@chr5:32270354..32270364, -
1.47e-48FFCP PHASE1:Mm9::chr3:126314780..126314810,-#_3d40ab8965de1f99e36a92967a0911d3p@chr3:126314780..126314810, -
1.47e-48FFCP PHASE2:Mm9::chr5:32270354..32270364,-#_3d40ab8965de1f99e36a92967a0911d3p@chr5:32270354..32270364, -
1.47e-48FFCP PHASE2:Mm9::chr3:126314780..126314810,-#_3d40ab8965de1f99e36a92967a0911d3p@chr3:126314780..126314810, -
3.07e-48FFCP PHASE1:Mm9::chr12:111682896..111682907,+#_9f6b91c7868010c70d9468ef46e0f698p@chr12:111682896..111682907, +
3.07e-48FFCP PHASE2:Mm9::chr12:111682896..111682907,+#_9f6b91c7868010c70d9468ef46e0f698p@chr12:111682896..111682907, +
4.07e-48FFCP PHASE2:Mm9::chr2:84491058..84491102,+#_6a99a86d71fd23bac62663434875c9c3p@chr2:84491058..84491102, +
4.07e-48FFCP PHASE1:Mm9::chr2:84491058..84491102,+#_6a99a86d71fd23bac62663434875c9c3p@chr2:84491058..84491102, +
4.98e-48FFCP PHASE2:Mm9::chr1:90912298..90912303,+#_0bfb4d7aa4c6a40ee5acec2b41c0b6e7p3@1700067G17Rik
4.98e-48FFCP PHASE1:Mm9::chr1:90912298..90912303,+#_0bfb4d7aa4c6a40ee5acec2b41c0b6e7p3@1700067G17Rik
6.85e-48FFCP PHASE1:Mm9::chr15:100568814..100568821,-#_20b498d739e3743dfc1e129176606680p@chr15:100568814..100568821, -
6.85e-48FFCP PHASE2:Mm9::chr15:100568814..100568821,-#_20b498d739e3743dfc1e129176606680p@chr15:100568814..100568821, -
1.78e-47FFCP PHASE1:Mm9::chr2:167904248..167904260,+#_08711854095697db2c3867cf3f2da76ap@chr2:167904248..167904260, +
1.78e-47FFCP PHASE2:Mm9::chr2:167904248..167904260,+#_08711854095697db2c3867cf3f2da76ap@chr2:167904248..167904260, +
2.02e-47FFCP PHASE1:Mm9::chr10:19251573..19251584,+#_a129cc08708f03773b86d1b813b33ac5p@chr10:19251573..19251584, +
2.02e-47FFCP PHASE2:Mm9::chr10:19251573..19251584,+#_a129cc08708f03773b86d1b813b33ac5p@chr10:19251573..19251584, +
3.29e-47FFCP PHASE1:Mm9::chr9:66888952..66888964,+#_ad3d7d2431db55459e4ecffe337751ffp@chr9:66888952..66888964, +
3.29e-47FFCP PHASE2:Mm9::chr9:66888952..66888964,+#_ad3d7d2431db55459e4ecffe337751ffp@chr9:66888952..66888964, +
1.12e-46FFCP PHASE1:Mm9::chr1:36331417..36331462,+#_fb365a36271a21acab30798e8cc91c94p@chr1:36331417..36331462, +
1.12e-46FFCP PHASE2:Mm9::chr1:36331417..36331462,+#_fb365a36271a21acab30798e8cc91c94p@chr1:36331417..36331462, +
3.4e-45FFCP PHASE2:Mm9::chr8:126155114..126155118,+#_3471c72cbb73825a93c726bec47b02e4p1@uc009nwl.1
3.4e-45FFCP PHASE1:Mm9::chr15:83305098..83305104,+#_3471c72cbb73825a93c726bec47b02e4p@chr15:83305098..83305104, +
3.4e-45FFCP PHASE1:Mm9::chr8:126155114..126155118,+#_3471c72cbb73825a93c726bec47b02e4p1@uc009nwl.1
3.4e-45FFCP PHASE2:Mm9::chr15:83305098..83305104,+#_3471c72cbb73825a93c726bec47b02e4p@chr15:83305098..83305104, +
6.51e-45FFCP PHASE1:Mm9::chr7:20335303..20335317,+#_6b1b7be6f13ee6bbd85cdab1e2cd6c77p@chr7:20335303..20335317, +
6.51e-45FFCP PHASE2:Mm9::chr7:20335303..20335317,+#_6b1b7be6f13ee6bbd85cdab1e2cd6c77p@chr7:20335303..20335317, +
7.31e-45FFCP PHASE1:Mm9::chr5:135442349..135442362,-#_687a3da78d67f45fde1fc8a1b9016343p@chr5:135442349..135442362, -
7.31e-45FFCP PHASE2:Mm9::chr5:135442349..135442362,-#_687a3da78d67f45fde1fc8a1b9016343p@chr5:135442349..135442362, -
1.85e-44FFCP PHASE1:Mm9::chr5:145015979..145015991,-#_d338bafdcc739a75447c873db7a6a063p@chr5:145015979..145015991, -
1.85e-44FFCP PHASE2:Mm9::chr4:62163210..62163216,-#_d338bafdcc739a75447c873db7a6a063p3@Hdhd3
1.85e-44FFCP PHASE1:Mm9::chr4:62163210..62163216,-#_d338bafdcc739a75447c873db7a6a063p3@Hdhd3
1.85e-44FFCP PHASE2:Mm9::chr5:145015979..145015991,-#_d338bafdcc739a75447c873db7a6a063p@chr5:145015979..145015991, -
1.86e-44FFCP PHASE2:Mm9::chrX:96331285..96331289,-#_4d9a0af4057598fcba2b038a0b8e5cd4p@chrX:96331285..96331289, -
1.86e-44FFCP PHASE1:Mm9::chrX:96331285..96331289,-#_4d9a0af4057598fcba2b038a0b8e5cd4p@chrX:96331285..96331289, -
5.06e-44FFCP PHASE2:Mm9::chr7:29382208..29382215,+#_08ae6e7844fea770eec41cd23921a99ep@chr7:29382208..29382215, +
5.06e-44FFCP PHASE1:Mm9::chr7:29382208..29382215,+#_08ae6e7844fea770eec41cd23921a99ep@chr7:29382208..29382215, +
7.11e-44FFCP PHASE2:Mm9::chr14:73507116..73507118,+#_381f7735ddc0dd916fcb83aaf7dd76a4p@chr14:73507116..73507118, +
7.11e-44FFCP PHASE1:Mm9::chr14:73507116..73507118,+#_381f7735ddc0dd916fcb83aaf7dd76a4p@chr14:73507116..73507118, +
9.98e-44FFCP PHASE2:Mm9::chr11:69778735..69778745,-#_9fb29cced1c247a7382a9a573d716cd8p@chr11:69778735..69778745, -
9.98e-44FFCP PHASE1:Mm9::chr19:6264408..6264418,-#_9fb29cced1c247a7382a9a573d716cd8p@chr19:6264408..6264418, -
9.98e-44FFCP PHASE2:Mm9::chr19:6264408..6264418,-#_9fb29cced1c247a7382a9a573d716cd8p@chr19:6264408..6264418, -
9.98e-44FFCP PHASE1:Mm9::chr11:69778735..69778745,-#_9fb29cced1c247a7382a9a573d716cd8p@chr11:69778735..69778745, -
1.18e-43FFCP PHASE2:Mm9::chr5:99756112..99756132,-#_b824502792b609f5e7e928042d60862dp@chr5:99756112..99756132, -
1.18e-43FFCP PHASE1:Mm9::chr5:99756112..99756132,-#_b824502792b609f5e7e928042d60862dp@chr5:99756112..99756132, -
1.21e-43FFCP PHASE1:Mm9::chr4:133369317..133369320,+#_f64fbd11bbccd5b81173bd8e9cf53908p@chr4:133369317..133369320, +
1.21e-43FFCP PHASE2:Mm9::chr4:133369317..133369320,+#_f64fbd11bbccd5b81173bd8e9cf53908p@chr4:133369317..133369320, +

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