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{{UBERON
{{UBERON
|id=UBERON:0005423
|alt_id=
|name=developing anatomical structure
|namespace=
|def=
|xref=AEO:0000125;;EHDAA2:0003125;;FBbt:00007006;;MIAA:0000019
|is_a=UBERON:0000465
|synonym="developing structure" RELATED [];;"developmental structure" RELATED [];;"developmental tissue" RELATED [MIAA:0000019]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005423
|is_a=UBERON:0000465
|is_obsolete=
|located_in=
|located_in=
|name=developing anatomical structure
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="developing structure" RELATED [];;"developmental structure" RELATED [];;"developmental tissue" RELATED [MIAA:0000019]
|union_of=
|xref=AEO:0000125;;EHDAA2:0003125;;FBbt:00007006;;MIAA:0000019
}}
}}

Latest revision as of 17:53, 12 September 2014

Name:developing anatomical structure
Namespace:FANTOM
Xrefs:
links:

AEO:0000125
EHDAA2:0003125
FBbt:00007006

MIAA:0000019
Synonyms: "developing structure" RELATED []
"developmental structure" RELATED []
"developmental tissue" RELATED [MIAA:0000019]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000465(material anatomical entity)



Children

is a:UBERON:0000164 (primitive urogenital sinus),UBERON:0001048 (primordium),UBERON:0002050 (embryonic structure),UBERON:0002120 (pronephros),UBERON:0002329 (somite),UBERON:0003057 (chordal neural plate),UBERON:0003059 (presomitic mesoderm),UBERON:0003061 (blood island),UBERON:0003063 (prechordal plate),UBERON:0003064 (intermediate mesoderm),UBERON:0003068 (axial mesoderm),UBERON:0003076 (posterior neural tube),UBERON:0003080 (anterior neural tube),UBERON:0004139 (cardiogenic plate),UBERON:0004871 (somatic layer of lateral plate mesoderm),UBERON:0004872 (splanchnic layer of lateral plate mesoderm),UBERON:0004874 (somatopleure),UBERON:0004875 (nephrogenic cord),UBERON:0004876 (urogenital ridge),UBERON:0004880 (chordamesoderm),UBERON:0005061 (neural groove),UBERON:0005095 (kidney rudiment),UBERON:0005294 (genital ridge),UBERON:0005754 (rostral part of nephrogenic cord),UBERON:0005868 (maxillary prominence),UBERON:0005870 (olfactory pit),UBERON:0005876 (undifferentiated genital tubercle),UBERON:0005882 (neural tube alar plate),UBERON:0006238 (future brain),UBERON:0006241 (future spinal cord),UBERON:0006268 (notochordal process),UBERON:0006283 (future cardiac ventricle),UBERON:0006598 (presumptive structure),UBERON:0006777 (tectal plate),UBERON:0006965 (vascular cord),UBERON:0007238 (1st arch maxillary component),UBERON:0007645 (future meninx),UBERON:0007687 (kidney field),UBERON:0008425 (mammary ridge),UBERON:0008836 (liver bud),UBERON:0009123 (otic cup),UBERON:0009143 (esophageal region),UBERON:0009145 (pharyngeal region of foregut),UBERON:0010056 (future tongue),UBERON:0010092 (future metencephalon),UBERON:0010096 (future myelencephalon),UBERON:0010226 (future cardiac ventricle),UBERON:0010227 (future cardiac atrium),UBERON:0010312 (immature eye),UBERON:0012314 (embryonic facial prominence)... further results

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005423 (developing anatomical structure), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data