FFCP PHASE1:Hg19::chr10:101381173..101381230,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:101381173..101381230,+
|short_description=p1@BC029589
|description=CAGE_peak_1_at_BC029589_5end
|association_with_transcript=361bp_to_BC029589_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=361bp_to_BC029589_5end | |||
|cluster_id=chr10:101381173..101381230,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_BC029589_5end | |||
|id=chr10:101381173..101381230,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.18e-27!42;CL:0000860!7.92e-26!45;CL:0000557!1.69e-21!71;CL:0000766!3.97e-20!76;CL:0000839!2.02e-19!70;CL:0002009!4.40e-19!65;CL:0000763!1.07e-18!112;CL:0000049!1.07e-18!112;CL:0002371!1.53e-18!591;CL:0000144!2.08e-18!625;CL:0000012!3.92e-18!682;CL:0002194!5.96e-18!63;CL:0000576!5.96e-18!63;CL:0000040!5.96e-18!63;CL:0000559!5.96e-18!63;CL:0000548!7.60e-17!679;CL:0000004!7.60e-17!679;CL:0000255!7.60e-17!679;CL:0000034!1.75e-16!444;CL:0000048!2.61e-16!430;CL:0000723!4.28e-16!436;CL:0000003!1.17e-15!722;CL:0000134!2.75e-11!358;CL:0002320!1.46e-10!365;CL:0000063!5.31e-10!578;CL:0000988!6.00e-10!182;CL:0000219!1.16e-09!390;CL:0000738!1.34e-09!140;CL:0000037!1.88e-09!172;CL:0000566!1.88e-09!172;CL:0002032!2.70e-09!165;CL:0000837!2.70e-09!165;CL:0002031!2.80e-08!124;CL:0002087!4.24e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.12e-54;33!CL:0002057;6.12e-54;33!CL:0000473;3.70e-43;39!CL:0000234;3.70e-43;39!CL:0000576;1.64e-30;48!CL:0000766;2.60e-26;69!CL:0000763;8.09e-12;100!CL:0002087;3.27e-08;104!CL:0000738;6.15e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.78e-57,42;CL:0002057,2.78e-57,42;CL:0000473,1.26e-56,48;CL:0000234,1.26e-56,48;CL:0000557,1.73e-51,67;CL:0000766,5.94e-51,72;CL:0002009,1.65e-45,61;CL:0000839,2.59e-45,66;CL:0002194,1.57e-42,59;CL:0000576,1.57e-42,59;CL:0000040,1.57e-42,59;CL:0000559,1.57e-42,59;CL:0000763,6.21e-38,108;CL:0000049,6.21e-38,108;CL:0000738,8.74e-32,136;CL:0002031,1.10e-25,120;CL:0000037,1.31e-25,168;CL:0000988,2.20e-24,177;CL:0002032,6.20e-24,161;CL:0000837,6.20e-24,161;CL:0002087,3.13e-22,115;CL:0000134,1.47e-16,354;CL:0002320,8.43e-16,361;CL:0000034,3.48e-15,441;CL:0000723,1.16e-14,433;CL:0000048,1.33e-14,427;CL:0000219,7.68e-14,386 | |||
|ontology_enrichment_development_v019=CL:0002057;9.70e-41;42!CL:0000049;6.43e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.82e-21!80;UBERON:0001474!8.22e-21!86;UBERON:0002204!2.20e-20!167;UBERON:0004765!8.41e-20!101;UBERON:0001434!8.41e-20!101;UBERON:0002390!2.45e-16!102;UBERON:0003061!2.45e-16!102;UBERON:0002193!7.36e-15!112;UBERON:0002405!5.25e-14!115;UBERON:0002384!6.48e-10!375;UBERON:0003081!3.05e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.89e-50,76;UBERON:0001474,6.18e-47,82;UBERON:0004765,2.24e-43,90;UBERON:0001434,1.15e-40,100;UBERON:0002390,2.54e-40,98;UBERON:0003061,2.54e-40,98;UBERON:0002405,6.74e-38,93;UBERON:0002193,4.57e-35,108;UBERON:0002204,5.79e-26,167;UBERON:0003081,6.37e-23,203;UBERON:0002384,9.00e-15,371;UBERON:0000926,1.66e-10,315;UBERON:0004120,1.66e-10,315;UBERON:0006603,1.66e-10,315 | |||
|phase1_expression=0.363356758541113,1.2846031433459,1.12763523276777,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0.245733936501509,2.09340350391728,0,0,0,0.331397375727916,0,0,0,0,0.61560529038394,0.204000691244253,0.626909442956176,0.286235987131057,0.273748850145768,0.502170558379211,0.229240217243854,0.164201178899891,0.0787107813136792,1.18009283054671,1.53531759238885,1.08371286321253,0,1.50602959389125,2.58827807116751,0.0774672005803016,0,2.05520307534393,7.75593571944628,4.01088894940283,6.51032612147556,0.895661896959697,0,0,2.18097358169347,2.26725566213286,1.69808842831471,6.50801303335917,4.93401465626191,4.64559556342655,12.6584652621746,11.7833925003386,13.4794871036494,12.4108445065183,7.74581620300591,12.1883837934908,5.45902784673554,7.09555990150399,7.41587498668779,14.0798590490615,21.1813157870222,14.7047538933779,1.9791078011203,2.79249120670285,4.68847225585964,29.311133101487,21.5606385382633,24.2900677108274,6.28121663141858,12.5155900420848,8.90474263290978,18.1619850790011,33.1449872388808,29.7474644194431,1.26753171787165,0.637812899895131,0.838634582033504,2.3589012540764,2.55300717830561,1.92870704036496,0.570025487482497,0.19891667719909,0.730656615058536,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0,0,1.32171328579026,1.12101712596307,0.526768169550154,0,0,0.205601498999509,0.334372990781356,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0.328875809207352,0.276350017785848,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,1.24930726552346,0,0,0,0,0.289648807765598,0,0.670700859703636,0,0.722878304769133,2.50668955317945,0.289693037921647,0,1.45990461090791,0.378139268656271,0.221729397462564,0.175669571386252,0.130979075497713,1.45718115317017,0.370784442784429,0,0,0.132957960518865,0.953962497221368,0,0,0.39752481473341,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0.835979866147242,0,0.35576626268671,0,0,0.760272105718513,0,0,0.81014194788176,0.267899184852239,0,0.337834441449967,0,0,0.183201743930407,2.63560834872127,0,0,0,0.12663051166458,2.25095607382472,0.860509862246441,0,0,0,0.49333509683432,0,0,0,0.302714855289863,0,0.70296429550139,0,0.570471821544449,0.149448680551801,0.352303495931295,0.485618833104395,0.421352420106746,0.816616685019573,0.491337269247072,0.413303124703062,1.18800285728205,0.741800787835671,0,0,0.336672227908132,0,0,0.438977620880838,0.30648779579902,1.35214253015937,0.113432183160021,0.358779271377724,1.2813443329114,1.05965950579781,0.600182192168805,0.206105058476878,0.515281080091258,0.37223371266318,0,0.487185025805993,1.51460264546469,0.460249493211497,1.2931684545505,0,0.302256294682921,0.339121184620975,0.193260853163297,0.272746120590835,0.573609190778008,0.243947412259191,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0.928735856063958,1.44375896333917,0.236613600079688,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.404493924480493,0,0.769494313892781,0,1.40241773803446,0,1.47008711385542,0,0,0.590789906681404,0,0.245976877086227,0,0.329250856225877,1.1240175325762,0,0.277765335475589,0,0,0,0.115930404975077,0.117408694235822,0.433099343283221,0.925971025153221,0.380508304469197,1.58040879591855,1.71697232418975,0,0.234004265139238,0.148631162288728,2.81201501960331,0.335964256397719,0.141775097242386,0.268675568108545,0,1.15014803749563,8.37527504423104,0.176096868026452,2.07328115540772,1.00883967391873,1.76739406796932,0.063497894292169,0,0,5.13217338068116,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,3.57656445851882,0,0,0,0.514414748524284,0,0.266422179016099,0.142977993658148,1.08524321078289,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.299918973546171,1.2162378064119,1.00451418286425,2.10833939483032,0,1.14861935834114,0,0.144781306667579,0,0.358121926479791,0.112085143993527,1.18218456121156,0.215627574859517,0.641715181398742,0.254094624222463,0,0,0,0.637938751653163,0,0,1.24324654030811,0,0,0,1.03985430765404,0.178428988797162,0.473107245101804,0,0,0,1.03473071292505,0,0.553107505625109,0.434418072340414,0.979005787313703,0,0.206768026122887,2.15714200818617,2.13455115606889,1.5156378572313,0,1.5119514666484,0.248107807818777,2.14846762603287,0.841980283299221,0.512556597022804,0.511707249066704,0.321707842287215,0,0.462629081407967,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.604297247958111,0.200506470303285,0.460404944679482,0.459257792658427,0.182091168006717,0.393373244878272,0.451199612907412,0,0.784349769176855,0,0.105551628892876,0,0.340187410553031,0,0,0.541892875087706,0.501689773854853,0.254876273045038,0.831076008928724,0,0.657779629937804,0,0,0,0.325378394664303,0.103041011647722,0.54941678891006,0.41254749960294,0.574265537996172,1.30012049207304,0,0.48335359146061,0.462145851343933,0.460511024178389,0.275673144969061,0.214840489736547,0.435050081742686,0.255679882248303,0.356128142586949,0.661139661443912,0.384380134730212,0.63806356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| ||
|short_description=p1@BC029589 | |||
}} | }} |
Latest revision as of 09:24, 23 July 2015
Short description: | p1@BC029589 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC029589_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 361bp_to_BC029589_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.78e-57 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.78e-57 | 42 |
defensive cell | 1.26e-56 | 48 |
phagocyte | 1.26e-56 | 48 |
granulocyte monocyte progenitor cell | 1.73e-51 | 67 |
myeloid leukocyte | 5.94e-51 | 72 |
macrophage dendritic cell progenitor | 1.65e-45 | 61 |
myeloid lineage restricted progenitor cell | 2.59e-45 | 66 |
monopoietic cell | 1.57e-42 | 59 |
monocyte | 1.57e-42 | 59 |
monoblast | 1.57e-42 | 59 |
promonocyte | 1.57e-42 | 59 |
myeloid cell | 6.21e-38 | 108 |
common myeloid progenitor | 6.21e-38 | 108 |
leukocyte | 8.74e-32 | 136 |
hematopoietic lineage restricted progenitor cell | 1.10e-25 | 120 |
hematopoietic stem cell | 1.31e-25 | 168 |
hematopoietic cell | 2.20e-24 | 177 |
hematopoietic oligopotent progenitor cell | 6.20e-24 | 161 |
hematopoietic multipotent progenitor cell | 6.20e-24 | 161 |
nongranular leukocyte | 3.13e-22 | 115 |
mesenchymal cell | 1.47e-16 | 354 |
connective tissue cell | 8.43e-16 | 361 |
stem cell | 3.48e-15 | 441 |
somatic stem cell | 1.16e-14 | 433 |
multi fate stem cell | 1.33e-14 | 427 |
motile cell | 7.68e-14 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.89e-50 | 76 |
bone element | 6.18e-47 | 82 |
skeletal element | 2.24e-43 | 90 |
skeletal system | 1.15e-40 | 100 |
hematopoietic system | 2.54e-40 | 98 |
blood island | 2.54e-40 | 98 |
immune system | 6.74e-38 | 93 |
hemolymphoid system | 4.57e-35 | 108 |
musculoskeletal system | 5.79e-26 | 167 |
lateral plate mesoderm | 6.37e-23 | 203 |
connective tissue | 9.00e-15 | 371 |
mesoderm | 1.66e-10 | 315 |
mesoderm-derived structure | 1.66e-10 | 315 |
presumptive mesoderm | 1.66e-10 | 315 |