FFCP PHASE1:Hg19::chr10:102051168..102051211,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:102051168..102051211,- | |||
|coexpression_cluster_id=C67 | |coexpression_cluster_id=C67 | ||
|description=CAGE_peak_at_chr10:102051168..102051211,- | |description=CAGE_peak_at_chr10:102051168..102051211,- | ||
|id=chr10:102051168..102051211,- | |id=chr10:102051168..102051211,- | ||
|ontology_enrichment_celltype=CL:0002194!2.36e-71!63;CL:0000576!2.36e-71!63;CL:0000040!2.36e-71!63;CL:0000559!2.36e-71!63;CL:0002057!3.29e-69!42;CL:0002009!1.10e-68!65;CL:0000766!8.82e-67!76;CL:0000860!1.08e-66!45;CL:0000839!1.13e-62!70;CL:0000557!1.43e-61!71;CL:0000763!1.36e-41!112;CL:0000049!1.36e-41!112;CL:0002087!2.67e-39!119;CL:0000738!1.14e-36!140;CL:0002031!1.58e-35!124;CL:0002032!2.14e-28!165;CL:0000837!2.14e-28!165;CL:0000037!1.16e-27!172;CL:0000566!1.16e-27!172;CL:0000988!3.61e-25!182;CL:0002393!1.21e-12!9;CL:0002397!1.21e-12!9;CL:0000134!4.48e-08!358;CL:0002619!9.62e-08!3;CL:0002320!1.30e-07!365;CL:0000235!7.20e-07!10 | |ontology_enrichment_celltype=CL:0002194!2.36e-71!63;CL:0000576!2.36e-71!63;CL:0000040!2.36e-71!63;CL:0000559!2.36e-71!63;CL:0002057!3.29e-69!42;CL:0002009!1.10e-68!65;CL:0000766!8.82e-67!76;CL:0000860!1.08e-66!45;CL:0000839!1.13e-62!70;CL:0000557!1.43e-61!71;CL:0000763!1.36e-41!112;CL:0000049!1.36e-41!112;CL:0002087!2.67e-39!119;CL:0000738!1.14e-36!140;CL:0002031!1.58e-35!124;CL:0002032!2.14e-28!165;CL:0000837!2.14e-28!165;CL:0000037!1.16e-27!172;CL:0000566!1.16e-27!172;CL:0000988!3.61e-25!182;CL:0002393!1.21e-12!9;CL:0002397!1.21e-12!9;CL:0000134!4.48e-08!358;CL:0002619!9.62e-08!3;CL:0002320!1.30e-07!365;CL:0000235!7.20e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.84e-94;33!CL:0002057;2.84e-94;33!CL:0000473;2.81e-87;39!CL:0000234;2.81e-87;39!CL:0000576;1.23e-64;48!CL:0000766;8.27e-40;69!CL:0000763;6.50e-21;100!CL:0002619;7.25e-18;3!CL:0002087;1.38e-16;104!CL:0000235;1.01e-14;6!CL:0000738;6.69e-12;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.97e-100,48;CL:0000234,3.97e-100,48;CL:0002194,1.28e-96,59;CL:0000576,1.28e-96,59;CL:0000040,1.28e-96,59;CL:0000559,1.28e-96,59;CL:0002009,2.67e-93,61;CL:0000860,3.92e-86,42;CL:0002057,3.92e-86,42;CL:0000839,7.24e-86,66;CL:0000557,1.64e-84,67;CL:0000766,4.08e-83,72;CL:0000763,1.53e-53,108;CL:0000049,1.53e-53,108;CL:0002087,6.78e-47,115;CL:0002031,1.09e-44,120;CL:0000738,2.87e-41,136;CL:0002032,6.91e-34,161;CL:0000837,6.91e-34,161;CL:0000037,3.28e-32,168;CL:0000988,3.01e-30,177;CL:0002619,7.26e-18,3;CL:0000235,9.08e-15,6;CL:0000134,8.51e-12,354;CL:0002320,1.96e-11,361;CL:0000219,3.68e-10,386;CL:0000048,2.03e-09,427;CL:0000723,3.43e-09,433;CL:0000034,6.76e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;8.94e-64;42!CL:0000049;3.42e-18;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.35e-57!102;UBERON:0003061!2.35e-57!102;UBERON:0002371!4.31e-55!80;UBERON:0002193!1.19e-54!112;UBERON:0001474!2.55e-52!86;UBERON:0002405!4.35e-47!115;UBERON:0004765!3.73e-42!101;UBERON:0001434!3.73e-42!101;UBERON:0003081!1.98e-23!216;UBERON:0002204!2.08e-23!167;UBERON:0000926!5.71e-10!448;UBERON:0004120!5.71e-10!448;UBERON:0006603!5.71e-10!448;UBERON:0000062!9.55e-09!511;UBERON:0000923!5.16e-07!604;UBERON:0005291!5.16e-07!604;UBERON:0006598!5.16e-07!604;UBERON:0002532!5.16e-07!604;UBERON:0002384!5.42e-07!375;UBERON:0002050!5.78e-07!605;UBERON:0005423!5.78e-07!605;UBERON:0000467!5.93e-07!625;UBERON:0000480!6.63e-07!626 | |ontology_enrichment_uberon=UBERON:0002390!2.35e-57!102;UBERON:0003061!2.35e-57!102;UBERON:0002371!4.31e-55!80;UBERON:0002193!1.19e-54!112;UBERON:0001474!2.55e-52!86;UBERON:0002405!4.35e-47!115;UBERON:0004765!3.73e-42!101;UBERON:0001434!3.73e-42!101;UBERON:0003081!1.98e-23!216;UBERON:0002204!2.08e-23!167;UBERON:0000926!5.71e-10!448;UBERON:0004120!5.71e-10!448;UBERON:0006603!5.71e-10!448;UBERON:0000062!9.55e-09!511;UBERON:0000923!5.16e-07!604;UBERON:0005291!5.16e-07!604;UBERON:0006598!5.16e-07!604;UBERON:0002532!5.16e-07!604;UBERON:0002384!5.42e-07!375;UBERON:0002050!5.78e-07!605;UBERON:0005423!5.78e-07!605;UBERON:0000467!5.93e-07!625;UBERON:0000480!6.63e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.72e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.82e-74,76;UBERON:0001474,4.32e-68,82;UBERON:0002405,4.30e-67,93;UBERON:0002390,2.23e-63,98;UBERON:0003061,2.23e-63,98;UBERON:0004765,1.52e-61,90;UBERON:0002193,5.73e-57,108;UBERON:0001434,8.14e-55,100;UBERON:0002204,1.95e-32,167;UBERON:0003081,3.44e-29,203;UBERON:0000926,1.95e-16,315;UBERON:0004120,1.95e-16,315;UBERON:0006603,1.95e-16,315;UBERON:0002384,6.09e-11,371;UBERON:0002106,8.00e-08,3;UBERON:0004854,8.00e-08,3;UBERON:0009034,8.00e-08,3;UBERON:0002095,8.00e-08,3;UBERON:0004782,8.00e-08,3;UBERON:0003281,8.00e-08,3;UBERON:0009664,8.00e-08,3;UBERON:0002296,8.00e-08,3;UBERON:0005602,8.00e-08,3;UBERON:0001179,8.00e-08,3;UBERON:0006293,8.00e-08,3 | |||
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|short_description=p@chr10:102051168..102051211,- | |short_description=p@chr10:102051168..102051211,- | ||
}} | }} |
Latest revision as of 09:28, 23 July 2015
Short description: | p@chr10:102051168..102051211, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:102051168..102051211, - |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.97e-100 | 48 |
phagocyte | 3.97e-100 | 48 |
monopoietic cell | 1.28e-96 | 59 |
monocyte | 1.28e-96 | 59 |
monoblast | 1.28e-96 | 59 |
promonocyte | 1.28e-96 | 59 |
macrophage dendritic cell progenitor | 2.67e-93 | 61 |
classical monocyte | 3.92e-86 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.92e-86 | 42 |
myeloid lineage restricted progenitor cell | 7.24e-86 | 66 |
granulocyte monocyte progenitor cell | 1.64e-84 | 67 |
myeloid leukocyte | 4.08e-83 | 72 |
myeloid cell | 1.53e-53 | 108 |
common myeloid progenitor | 1.53e-53 | 108 |
nongranular leukocyte | 6.78e-47 | 115 |
hematopoietic lineage restricted progenitor cell | 1.09e-44 | 120 |
leukocyte | 2.87e-41 | 136 |
hematopoietic oligopotent progenitor cell | 6.91e-34 | 161 |
hematopoietic multipotent progenitor cell | 6.91e-34 | 161 |
hematopoietic stem cell | 3.28e-32 | 168 |
hematopoietic cell | 3.01e-30 | 177 |
adult endothelial progenitor cell | 7.26e-18 | 3 |
macrophage | 9.08e-15 | 6 |
mesenchymal cell | 8.51e-12 | 354 |
connective tissue cell | 1.96e-11 | 361 |
motile cell | 3.68e-10 | 386 |
multi fate stem cell | 2.03e-09 | 427 |
somatic stem cell | 3.43e-09 | 433 |
stem cell | 6.76e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.82e-74 | 76 |
bone element | 4.32e-68 | 82 |
immune system | 4.30e-67 | 93 |
hematopoietic system | 2.23e-63 | 98 |
blood island | 2.23e-63 | 98 |
skeletal element | 1.52e-61 | 90 |
hemolymphoid system | 5.73e-57 | 108 |
skeletal system | 8.14e-55 | 100 |
musculoskeletal system | 1.95e-32 | 167 |
lateral plate mesoderm | 3.44e-29 | 203 |
mesoderm | 1.95e-16 | 315 |
mesoderm-derived structure | 1.95e-16 | 315 |
presumptive mesoderm | 1.95e-16 | 315 |
connective tissue | 6.09e-11 | 371 |
spleen | 8.00e-08 | 3 |
gastrointestinal system mesentery | 8.00e-08 | 3 |
stomach region | 8.00e-08 | 3 |
mesentery | 8.00e-08 | 3 |
gastrointestinal system serosa | 8.00e-08 | 3 |
mesentery of stomach | 8.00e-08 | 3 |
gut mesentery | 8.00e-08 | 3 |
dorsal mesentery | 8.00e-08 | 3 |
dorsal mesogastrium | 8.00e-08 | 3 |
peritoneal cavity | 8.00e-08 | 3 |
spleen primordium | 8.00e-08 | 3 |