FFCP PHASE1:Hg19::chr10:104160693..104160700,+: Difference between revisions
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|id=chr10:104160693..104160700,+
|short_description=p@chr10:104160693..104160700,+
|description=CAGE_peak_at_chr10:104160693..104160700,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:104160693..104160700,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:104160693..104160700,+ | |||
|id=chr10:104160693..104160700,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.28e-30!42;CL:0000860!2.85e-27!45;CL:0002009!1.98e-22!65;CL:0002194!9.79e-22!63;CL:0000576!9.79e-22!63;CL:0000040!9.79e-22!63;CL:0000559!9.79e-22!63;CL:0000557!8.39e-20!71;CL:0000766!1.38e-19!76;CL:0000839!9.98e-19!70;CL:0000738!1.47e-18!140;CL:0002087!9.55e-17!119;CL:0000763!2.43e-16!112;CL:0000049!2.43e-16!112;CL:0002031!1.20e-15!124;CL:0000988!1.55e-15!182;CL:0002032!8.18e-15!165;CL:0000837!8.18e-15!165;CL:0000037!1.46e-14!172;CL:0000566!1.46e-14!172;CL:0000135!2.77e-07!3;CL:0000386!2.77e-07!3;CL:0000388!2.77e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.87e-56;33!CL:0002057;1.87e-56;33!CL:0000473;6.05e-43;39!CL:0000234;6.05e-43;39!CL:0000576;9.21e-28;48!CL:0000766;5.38e-18;69!CL:0002087;6.68e-09;104!CL:0000763;7.46e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.19e-50,42;CL:0002057,2.19e-50,42;CL:0000473,7.11e-49,48;CL:0000234,7.11e-49,48;CL:0002194,2.25e-38,59;CL:0000576,2.25e-38,59;CL:0000040,2.25e-38,59;CL:0000559,2.25e-38,59;CL:0002009,5.09e-37,61;CL:0000766,2.21e-34,72;CL:0000839,5.52e-34,66;CL:0000557,1.97e-33,67;CL:0000763,9.31e-22,108;CL:0000049,9.31e-22,108;CL:0002087,3.02e-20,115;CL:0002031,3.00e-19,120;CL:0000738,1.89e-18,136;CL:0002032,5.60e-15,161;CL:0000837,5.60e-15,161;CL:0000037,3.44e-14,168;CL:0000988,2.88e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.65e-33;42!CL:0000049;2.56e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.30e-16!80;UBERON:0002390!2.98e-16!102;UBERON:0003061!2.98e-16!102;UBERON:0001737!2.60e-15!9;UBERON:0001474!7.21e-15!86;UBERON:0002193!6.04e-14!112;UBERON:0004765!2.01e-13!101;UBERON:0001434!2.01e-13!101;UBERON:0002204!1.05e-10!167;UBERON:0002405!7.67e-10!115;UBERON:0003081!1.19e-07!216;UBERON:0000043!2.77e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.18e-19;9!UBERON:0001557;4.18e-19;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.28e-29,76;UBERON:0001474,1.00e-26,82;UBERON:0004765,4.73e-24,90;UBERON:0002405,3.64e-23,93;UBERON:0002390,8.28e-22,98;UBERON:0003061,8.28e-22,98;UBERON:0001434,2.65e-21,100;UBERON:0002193,1.82e-19,108;UBERON:0001737,7.40e-19,9;UBERON:0002204,2.72e-14,167;UBERON:0003081,4.97e-11,203;UBERON:0001557,7.58e-09,19 | |||
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| ||
|short_description=p@chr10:104160693..104160700,+ | |||
}} | }} |
Latest revision as of 09:46, 23 July 2015
Short description: | p@chr10:104160693..104160700, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104160693..104160700, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.19e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.19e-50 | 42 |
defensive cell | 7.11e-49 | 48 |
phagocyte | 7.11e-49 | 48 |
monopoietic cell | 2.25e-38 | 59 |
monocyte | 2.25e-38 | 59 |
monoblast | 2.25e-38 | 59 |
promonocyte | 2.25e-38 | 59 |
macrophage dendritic cell progenitor | 5.09e-37 | 61 |
myeloid leukocyte | 2.21e-34 | 72 |
myeloid lineage restricted progenitor cell | 5.52e-34 | 66 |
granulocyte monocyte progenitor cell | 1.97e-33 | 67 |
myeloid cell | 9.31e-22 | 108 |
common myeloid progenitor | 9.31e-22 | 108 |
nongranular leukocyte | 3.02e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 3.00e-19 | 120 |
leukocyte | 1.89e-18 | 136 |
hematopoietic oligopotent progenitor cell | 5.60e-15 | 161 |
hematopoietic multipotent progenitor cell | 5.60e-15 | 161 |
hematopoietic stem cell | 3.44e-14 | 168 |
hematopoietic cell | 2.88e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.28e-29 | 76 |
bone element | 1.00e-26 | 82 |
skeletal element | 4.73e-24 | 90 |
immune system | 3.64e-23 | 93 |
hematopoietic system | 8.28e-22 | 98 |
blood island | 8.28e-22 | 98 |
skeletal system | 2.65e-21 | 100 |
hemolymphoid system | 1.82e-19 | 108 |
larynx | 7.40e-19 | 9 |
musculoskeletal system | 2.72e-14 | 167 |
lateral plate mesoderm | 4.97e-11 | 203 |
upper respiratory tract | 7.58e-09 | 19 |