FFCP PHASE1:Hg19::chr10:105650037..105650058,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105650037..105650058,- | |||
|description=CAGE_peak_at_chr10:105650037..105650058,- | |description=CAGE_peak_at_chr10:105650037..105650058,- | ||
|id=chr10:105650037..105650058,- | |id=chr10:105650037..105650058,- | ||
|ontology_enrichment_celltype=CL:0000066!8.39e-19!254;CL:0000223!3.50e-18!59;CL:0002076!9.17e-17!43;CL:0002251!1.11e-07!21 | |ontology_enrichment_celltype=CL:0000066!8.39e-19!254;CL:0000223!3.50e-18!59;CL:0002076!9.17e-17!43;CL:0002251!1.11e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002178;3.85e-15;3!CL:0002537;3.04e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.80e-15,3;CL:0002537,2.80e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.01e-11;1!UBERON:0009497;7.55e-08;13 | |||
|ontology_enrichment_disease=DOID:305!3.27e-22!106;DOID:0050687!9.28e-15!143;DOID:299!5.48e-12!25 | |ontology_enrichment_disease=DOID:305!3.27e-22!106;DOID:0050687!9.28e-15!143;DOID:299!5.48e-12!25 | ||
|ontology_enrichment_disease_v019=DOID:3493;8.68e-23;2!DOID:4929;5.12e-22;2!DOID:299;7.13e-15;25!DOID:3111;1.01e-11;1!DOID:3603;1.01e-11;1!DOID:3119;2.46e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,8.70e-23,2;DOID:4929,8.27e-22,2;DOID:299,6.71e-15,25;DOID:3111,7.76e-12,1;DOID:3603,7.76e-12,1;DOID:305,1.33e-08,106;DOID:3119,2.51e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.44e-24!169;UBERON:0000925!1.44e-24!169;UBERON:0006595!1.44e-24!169;UBERON:0001007!1.80e-21!155;UBERON:0001555!1.80e-21!155;UBERON:0007026!1.80e-21!155;UBERON:0004921!7.10e-20!129;UBERON:0004185!7.10e-20!129;UBERON:0000077!1.63e-16!130;UBERON:0005409!1.70e-12!35;UBERON:0000160!1.91e-11!27;UBERON:0001041!3.70e-11!98;UBERON:0001004!1.87e-09!72;UBERON:0005911!4.65e-09!82;UBERON:0000065!2.37e-08!53;UBERON:0000344!7.31e-08!12;UBERON:0002075!7.79e-08!18;UBERON:0000466!2.26e-07!126;UBERON:0000062!3.46e-07!511;UBERON:0005177!5.40e-07!107;UBERON:0000464!7.42e-07!104;UBERON:0003104!8.63e-07!238;UBERON:0009142!8.63e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002114;4.28e-15;2!UBERON:0002294;4.06e-14;7!UBERON:0001173;4.06e-14;7!UBERON:0004913;1.01e-11;1!UBERON:0003703;1.01e-11;1!UBERON:0001174;1.01e-11;1!UBERON:0004914;1.01e-11;1!UBERON:0002394;1.47e-11;4!UBERON:0003928;1.47e-11;4!UBERON:0005409;2.15e-11;22!UBERON:0004921;1.87e-09;33!UBERON:0000945;1.87e-09;5!UBERON:0010039;1.87e-09;5!UBERON:0002108;2.00e-09;4!UBERON:0001041;2.46e-07;14!UBERON:0002423;6.35e-07;25!UBERON:0000305;7.63e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,6.54e-15,2;UBERON:0004913,1.81e-11,1;UBERON:0003703,1.81e-11,1;UBERON:0001174,1.81e-11,1;UBERON:0004914,1.81e-11,1;UBERON:0002294,5.77e-11,9;UBERON:0001173,5.77e-11,9;UBERON:0004912,5.77e-11,9;UBERON:0005409,4.84e-10,25;UBERON:0002108,2.57e-09,4;UBERON:0002394,6.38e-08,6;UBERON:0003928,6.38e-08,6;UBERON:0004119,1.35e-07,160;UBERON:0000925,1.35e-07,160;UBERON:0006595,1.35e-07,160;UBERON:0004921,1.90e-07,118;UBERON:0001007,4.30e-07,145;UBERON:0001555,4.30e-07,145;UBERON:0007026,4.30e-07,145;UBERON:0000305,7.19e-07,7;UBERON:0009497,7.80e-07,25;UBERON:0000015,7.80e-07,25;UBERON:0002423,7.80e-07,25;UBERON:0006235,7.80e-07,25;UBERON:0004161,7.80e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.601519410909855,1.84161977871793,0,0,0,0,0.231046011313244,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0.330569830721956,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,1.72202149068492,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,1.43246690842614,0,1.53580351049616,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,3.9384658428634,0,0.0986434056369336,0,0,0,0,0,0.7812832832557,0.174919999992391,0,0.455173793141999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0.108647371922008,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0.995261931078505,0.353830258013357,1.22206028986725,0,0,0,0,0,0,0,0.391329237864179,0.242780379534093,0,1.20990716048664,0,0,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0.694238953340524,0,0.0870592065804026,0,0,0.483781656445426,0.292357268344742,0.410577285266046,0.193978032976839,0,0.225980740780532,0,0,0,0.586654148204409,0.0801588202515337,1.06726497369676,0,1.72908500584927,0,0,0.576219191952599,0,0.471388069233591,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855434189421647,0,0.427149650270779,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69049698686902,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0.781514011233092,0,0.163771917510097,1.03499260351932,0,0.781078098613847,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0,0,0,0,0,0.207216164163037,0,1.38251932362818,0,0,0,0,0.4582137370881,0,0.955538938977433,0,4.41676051268593,5.48630662420212,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0.940634592723046,0,0.471353094203252,0,0,0.4226557275834,0,0,0,0,0,0,2.24675826729671,0.730336388246517,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.653150243690884,0,0.336760265072938,0.717222053926764,0.665320713092027,0.244209805832924,0,0,2.33545525477126,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p@chr10:105650037..105650058,- | |short_description=p@chr10:105650037..105650058,- | ||
}} | }} |
Latest revision as of 10:02, 23 July 2015
Short description: | p@chr10:105650037..105650058, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105650037..105650058, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.80e-15 | 3 |
amnion mesenchymal stem cell | 2.80e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
duodenum | 6.54e-15 | 2 |
hepatopancreatic ampulla | 1.81e-11 | 1 |
extrahepatic bile duct | 1.81e-11 | 1 |
common bile duct | 1.81e-11 | 1 |
duodenal papilla | 1.81e-11 | 1 |
biliary system | 5.77e-11 | 9 |
biliary tree | 5.77e-11 | 9 |
biliary bud | 5.77e-11 | 9 |
gastrointestinal system | 4.84e-10 | 25 |
small intestine | 2.57e-09 | 4 |
bile duct | 6.38e-08 | 6 |
digestive system duct | 6.38e-08 | 6 |
endoderm-derived structure | 1.35e-07 | 160 |
endoderm | 1.35e-07 | 160 |
presumptive endoderm | 1.35e-07 | 160 |
subdivision of digestive tract | 1.90e-07 | 118 |
digestive system | 4.30e-07 | 145 |
digestive tract | 4.30e-07 | 145 |
primitive gut | 4.30e-07 | 145 |
amnion | 7.19e-07 | 7 |
epithelium of foregut-midgut junction | 7.80e-07 | 25 |
anatomical boundary | 7.80e-07 | 25 |
hepatobiliary system | 7.80e-07 | 25 |
foregut-midgut junction | 7.80e-07 | 25 |
septum transversum | 7.80e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 8.70e-23 | 2 |
tubular adenocarcinoma | 8.27e-22 | 2 |
adenocarcinoma | 6.71e-15 | 25 |
cystadenocarcinoma | 7.76e-12 | 1 |
mucinous cystadenocarcinoma | 7.76e-12 | 1 |
carcinoma | 1.33e-08 | 106 |
gastrointestinal system cancer | 2.51e-07 | 14 |