FFCP PHASE1:Hg19::chr10:115070193..115070207,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:115070193..115070207,- | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_at_chr10:115070193..115070207,- | |description=CAGE_peak_at_chr10:115070193..115070207,- | ||
|id=chr10:115070193..115070207,- | |id=chr10:115070193..115070207,- | ||
|ontology_enrichment_celltype=CL:0002393!4.58e-68!9;CL:0002397!4.58e-68!9;CL:0002057!2.66e-42!42;CL:0000860!2.42e-39!45;CL:0000766!2.50e-37!76;CL:0002194!1.54e-35!63;CL:0000576!1.54e-35!63;CL:0000040!1.54e-35!63;CL:0000559!1.54e-35!63;CL:0002009!2.17e-34!65;CL:0000839!8.44e-32!70;CL:0000557!2.52e-31!71;CL:0000875!2.82e-30!3;CL:0002396!2.82e-30!3;CL:0000763!1.33e-24!112;CL:0000049!1.33e-24!112;CL:0000738!3.27e-24!140;CL:0002087!5.24e-23!119;CL:0002031!2.20e-19!124;CL:0000037!3.25e-19!172;CL:0000566!3.25e-19!172;CL:0000988!5.22e-18!182;CL:0002032!6.27e-18!165;CL:0000837!6.27e-18!165;CL:0000767!1.02e-13!3;CL:0000134!1.05e-07!358;CL:0002320!1.69e-07!365;CL:0000219!9.13e-07!390 | |ontology_enrichment_celltype=CL:0002393!4.58e-68!9;CL:0002397!4.58e-68!9;CL:0002057!2.66e-42!42;CL:0000860!2.42e-39!45;CL:0000766!2.50e-37!76;CL:0002194!1.54e-35!63;CL:0000576!1.54e-35!63;CL:0000040!1.54e-35!63;CL:0000559!1.54e-35!63;CL:0002009!2.17e-34!65;CL:0000839!8.44e-32!70;CL:0000557!2.52e-31!71;CL:0000875!2.82e-30!3;CL:0002396!2.82e-30!3;CL:0000763!1.33e-24!112;CL:0000049!1.33e-24!112;CL:0000738!3.27e-24!140;CL:0002087!5.24e-23!119;CL:0002031!2.20e-19!124;CL:0000037!3.25e-19!172;CL:0000566!3.25e-19!172;CL:0000988!5.22e-18!182;CL:0002032!6.27e-18!165;CL:0000837!6.27e-18!165;CL:0000767!1.02e-13!3;CL:0000134!1.05e-07!358;CL:0002320!1.69e-07!365;CL:0000219!9.13e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000875;4.06e-99;3!CL:0002396;4.06e-99;3!CL:0002393;1.73e-49;6!CL:0002397;1.73e-49;6!CL:0000576;2.27e-15;48!CL:0000766;5.47e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.42e-130,9;CL:0002397,1.42e-130,9;CL:0000875,4.06e-99,3;CL:0002396,4.06e-99,3;CL:0000860,1.39e-28,42;CL:0002057,1.39e-28,42;CL:0000473,4.34e-25,48;CL:0000234,4.34e-25,48;CL:0002194,3.46e-20,59;CL:0000576,3.46e-20,59;CL:0000040,3.46e-20,59;CL:0000559,3.46e-20,59;CL:0002009,1.49e-19,61;CL:0000839,3.91e-18,66;CL:0000557,7.10e-18,67;CL:0000766,1.10e-16,72;CL:0000763,2.52e-11,108;CL:0000049,2.52e-11,108;CL:0002087,1.15e-10,115;CL:0002031,3.06e-10,120;CL:0000738,4.36e-09,136;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.91e-20;42!CL:0000049;7.76e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.42e-27!80;UBERON:0001474!1.66e-25!86;UBERON:0002390!4.05e-24!102;UBERON:0003061!4.05e-24!102;UBERON:0002193!9.34e-22!112;UBERON:0004765!2.16e-21!101;UBERON:0001434!2.16e-21!101;UBERON:0002405!1.65e-18!115;UBERON:0002204!5.48e-12!167;UBERON:0003081!4.86e-10!216;UBERON:0002384!3.24e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!1.42e-27!80;UBERON:0001474!1.66e-25!86;UBERON:0002390!4.05e-24!102;UBERON:0003061!4.05e-24!102;UBERON:0002193!9.34e-22!112;UBERON:0004765!2.16e-21!101;UBERON:0001434!2.16e-21!101;UBERON:0002405!1.65e-18!115;UBERON:0002204!5.48e-12!167;UBERON:0003081!4.86e-10!216;UBERON:0002384!3.24e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.61e-16,76;UBERON:0001474,9.81e-15,82;UBERON:0004765,1.76e-13,90;UBERON:0002405,4.60e-13,93;UBERON:0002390,2.00e-12,98;UBERON:0003061,2.00e-12,98;UBERON:0001434,3.45e-12,100;UBERON:0002193,2.52e-11,108;UBERON:0002204,1.81e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.77408061658038,0,0,0,0,0,0,0,0.802177789880567,0.651032612147555,0,0.32389366601898,0,0,0,0.485168122375632,0,0,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0.918251677112708,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5350634357433,1.27562579979026,1.04829322754188,0,0,0,12.5405607246149,6.76316702476906,4.74926799788048,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.77408061658038,0,0,0,0,0,0,0,0.802177789880567,0.651032612147555,0,0.32389366601898,0,0,0,0.485168122375632,0,0,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0.918251677112708,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5350634357433,1.27562579979026,1.04829322754188,0,0,0,12.5405607246149,6.76316702476906,4.74926799788048,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:115070193..115070207,- | |short_description=p@chr10:115070193..115070207,- | ||
}} | }} |
Latest revision as of 10:34, 23 July 2015
Short description: | p@chr10:115070193..115070207, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:115070193..115070207, - |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.42e-130 | 9 |
CD14-positive, CD16-positive monocyte | 1.42e-130 | 9 |
non-classical monocyte | 4.06e-99 | 3 |
CD14-low, CD16-positive monocyte | 4.06e-99 | 3 |
classical monocyte | 1.39e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.39e-28 | 42 |
defensive cell | 4.34e-25 | 48 |
phagocyte | 4.34e-25 | 48 |
monopoietic cell | 3.46e-20 | 59 |
monocyte | 3.46e-20 | 59 |
monoblast | 3.46e-20 | 59 |
promonocyte | 3.46e-20 | 59 |
macrophage dendritic cell progenitor | 1.49e-19 | 61 |
myeloid lineage restricted progenitor cell | 3.91e-18 | 66 |
granulocyte monocyte progenitor cell | 7.10e-18 | 67 |
myeloid leukocyte | 1.10e-16 | 72 |
myeloid cell | 2.52e-11 | 108 |
common myeloid progenitor | 2.52e-11 | 108 |
nongranular leukocyte | 1.15e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.06e-10 | 120 |
leukocyte | 4.36e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.61e-16 | 76 |
bone element | 9.81e-15 | 82 |
skeletal element | 1.76e-13 | 90 |
immune system | 4.60e-13 | 93 |
hematopoietic system | 2.00e-12 | 98 |
blood island | 2.00e-12 | 98 |
skeletal system | 3.45e-12 | 100 |
hemolymphoid system | 2.52e-11 | 108 |
musculoskeletal system | 1.81e-07 | 167 |