FFCP PHASE1:Hg19::chr10:3668228..3668254,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3668228..3668254,- | |||
|description=CAGE_peak_at_chr10:3668228..3668254,- | |description=CAGE_peak_at_chr10:3668228..3668254,- | ||
|id=chr10:3668228..3668254,- | |id=chr10:3668228..3668254,- | ||
|ontology_enrichment_celltype=CL:0000055!8.88e-10!180;CL:0002541!3.35e-07!3;CL:0002564!3.57e-07!3;CL:0000188!4.08e-07!9 | |ontology_enrichment_celltype=CL:0000055!8.88e-10!180;CL:0002541!3.35e-07!3;CL:0002564!3.57e-07!3;CL:0000188!4.08e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002561;6.25e-14;2!CL:0002602;3.94e-13;2!CL:0002537;1.00e-11;5!CL:0002552;1.47e-11;5!CL:0000349;2.19e-11;19!CL:0002540;7.38e-10;6!CL:0002541;1.19e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,6.26e-14,2;CL:0002602,2.49e-13,2;CL:0002537,9.32e-12,5;CL:0002552,1.61e-11,5;CL:0000349,2.08e-11,19;CL:0002540,6.64e-10,6;CL:0002541,1.20e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;9.39e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,9.10e-08,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0005631;4.03e-22;10!UBERON:0000158;4.03e-22;10!UBERON:0000305;2.44e-14;7!UBERON:0005933;6.25e-14;2!UBERON:0005942;6.25e-14;2!UBERON:0005932;6.25e-14;2!UBERON:0006444;3.94e-13;2!UBERON:0001995;3.94e-13;2!UBERON:0004715;3.94e-13;2!UBERON:0011135;1.47e-11;5!UBERON:0002216;1.47e-11;5!UBERON:0011134;1.47e-11;5!UBERON:0002209;1.47e-11;5!UBERON:0002213;1.47e-11;5!UBERON:0007844;1.47e-11;5!UBERON:0011138;1.47e-11;5!UBERON:0001130;1.47e-11;5!UBERON:0001066;1.47e-11;5!UBERON:0001468;1.47e-11;5!UBERON:0004765;8.03e-11;26!UBERON:0001434;2.30e-10;36!UBERON:0003124;1.19e-09;3!UBERON:0000920;1.19e-09;3!UBERON:0000075;3.14e-09;16!UBERON:0002418;4.78e-09;3!UBERON:0004755;4.78e-09;3!UBERON:0000478;6.82e-09;24!UBERON:0002371;1.51e-08;12!UBERON:0007195;6.59e-08;1!UBERON:0004905;2.13e-07;8!UBERON:0000982;2.13e-07;8!UBERON:0001828;2.13e-07;8!UBERON:0004770;2.13e-07;8 | |||
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| ||
|short_description=p@chr10:3668228..3668254,- | |short_description=p@chr10:3668228..3668254,- | ||
}} | }} |
Latest revision as of 13:28, 23 July 2015
Short description: | p@chr10:3668228..3668254, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3668228..3668254, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 6.26e-14 | 2 |
annulus pulposus cell | 2.49e-13 | 2 |
amnion mesenchymal stem cell | 9.32e-12 | 5 |
fibroblast of gingiva | 1.61e-11 | 5 |
extraembryonic cell | 2.08e-11 | 19 |
mesenchymal stem cell of the bone marrow | 6.64e-10 | 6 |
chorionic membrane mesenchymal stem cell | 1.20e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.10e-15 | 14 |
membranous layer | 1.10e-15 | 14 |
amnion | 2.20e-14 | 7 |
hair root sheath | 6.26e-14 | 2 |
hair outer root sheath | 6.26e-14 | 2 |
bulb of hair follicle | 6.26e-14 | 2 |
annulus fibrosus | 2.49e-13 | 2 |
fibrocartilage | 2.49e-13 | 2 |
annulus fibrosus disci intervertebralis | 2.49e-13 | 2 |
somatic layer of lateral plate mesoderm | 1.32e-12 | 8 |
intervertebral cartilage | 1.12e-11 | 5 |
symphysis | 1.12e-11 | 5 |
nonsynovial joint | 1.12e-11 | 5 |
fibrous joint | 1.12e-11 | 5 |
cartilaginous joint | 1.12e-11 | 5 |
developing mesenchymal condensation | 1.12e-11 | 5 |
pre-cartilage condensation | 1.12e-11 | 5 |
cartilaginous condensation | 1.12e-11 | 5 |
cartilage element | 1.12e-11 | 5 |
post-cranial axial skeletal system | 1.12e-11 | 5 |
vertebral column | 1.12e-11 | 5 |
intervertebral disk | 1.12e-11 | 5 |
intervertebral joint | 1.12e-11 | 5 |
egg chorion | 1.20e-09 | 3 |
subdivision of skeletal system | 2.75e-09 | 16 |
cartilage tissue | 3.52e-09 | 3 |
skeletal tissue | 3.52e-09 | 3 |
extraembryonic structure | 6.54e-09 | 24 |
stroma of bone marrow | 6.59e-08 | 1 |
articulation | 1.80e-07 | 8 |
skeletal joint | 1.80e-07 | 8 |
articular system | 1.80e-07 | 8 |
gingiva | 2.25e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 9.10e-08 | 1 |