FFCP PHASE1:Hg19::chr10:50791370..50791375,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:50791370..50791375,- | |||
|description=CAGE_peak_at_chr10:50791370..50791375,- | |description=CAGE_peak_at_chr10:50791370..50791375,- | ||
|id=chr10:50791370..50791375,- | |id=chr10:50791370..50791375,- | ||
|ontology_enrichment_celltype=CL:0002620!5.11e-12!23 | |ontology_enrichment_celltype=CL:0002620!5.11e-12!23 | ||
|ontology_enrichment_celltype_v019=CL:0000222;1.07e-23;1!CL:0002127;4.59e-23;1!CL:0000911;4.59e-23;1!CL:0000814;4.59e-23;1!CL:0000054;1.65e-12;2!CL:0000137;1.65e-12;2!CL:0000092;1.65e-12;2 | |ontology_enrichment_celltype_v019=CL:0000222;1.07e-23;1!CL:0002127;4.59e-23;1!CL:0000911;4.59e-23;1!CL:0000814;4.59e-23;1!CL:0000054;1.65e-12;2!CL:0000137;1.65e-12;2!CL:0000092;1.65e-12;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,6.40e-23,1;CL:0000914,6.40e-23,1;CL:0000911,6.40e-23,1;CL:0000814,6.40e-23,1;CL:0002042,6.40e-23,1;CL:0002039,6.40e-23,1;CL:0002040,6.40e-23,1;CL:0002041,6.40e-23,1;CL:0000054,1.65e-12,2;CL:0000137,1.65e-12,2;CL:0000092,1.65e-12,2;CL:0000893,3.62e-12,2;CL:0002489,3.62e-12,2;CL:0000809,3.62e-12,2;CL:0000808,3.62e-12,2;CL:0000894,3.62e-12,2;CL:0000806,3.62e-12,2;CL:0000807,3.62e-12,2;CL:0000805,3.62e-12,2;CL:0002425,3.62e-12,2 | |||
|ontology_enrichment_development_v019=CL:0002425;3.06e-12;2 | |ontology_enrichment_development_v019=CL:0002425;3.06e-12;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060085;1.34e-23;1!DOID:3165;1.34e-23;1!DOID:0060121;1.34e-23;1!DOID:2438;1.34e-23;1!DOID:4418;1.34e-23;1!DOID:2355;2.10e-23;1!DOID:5662;2.62e-23;1!DOID:200;1.65e-12;2!DOID:4305;1.65e-12;2!DOID:74;2.07e-12;2!DOID:7;9.53e-12;39!DOID:0060072;6.87e-07;4!DOID:1287;7.69e-07;4 | |ontology_enrichment_disease_v019=DOID:0060085;1.34e-23;1!DOID:3165;1.34e-23;1!DOID:0060121;1.34e-23;1!DOID:2438;1.34e-23;1!DOID:4418;1.34e-23;1!DOID:2355;2.10e-23;1!DOID:5662;2.62e-23;1!DOID:200;1.65e-12;2!DOID:4305;1.65e-12;2!DOID:74;2.07e-12;2!DOID:7;9.53e-12;39!DOID:0060072;6.87e-07;4!DOID:1287;7.69e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.34e-23,1;DOID:3165,1.34e-23,1;DOID:0060121,1.34e-23,1;DOID:2438,1.34e-23,1;DOID:4418,1.34e-23,1;DOID:2355,2.10e-23,1;DOID:5662,2.62e-23,1;DOID:7,2.52e-14,39;DOID:200,1.65e-12,2;DOID:4305,1.65e-12,2;DOID:74,2.07e-12,2;DOID:0060072,6.87e-07,4;DOID:1287,7.70e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002097!5.27e-10!40;UBERON:0002199!1.09e-08!45;UBERON:0002416!1.09e-08!45 | |ontology_enrichment_uberon=UBERON:0002097!5.27e-10!40;UBERON:0002199!1.09e-08!45;UBERON:0002416!1.09e-08!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0000014;6.87e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000014;6.87e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,6.87e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554128230968366,0,0,0,0,0,0,0,1.50045548042201,0.309157587715317,0,0.37223371266318,0.168776332241266,0,0.504867548488229,0,0.161646056818812,0.710019185033229,0.201504196455281,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0.715880777515084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,13.1740939362482,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,27.2239018033096,0,0,0,0,0,0,0,0,0.432164393964449,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,3.64095327882873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38328142328561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624902039810533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5936204863088,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91529616043611,0,0,0,0,0,0,0,0,1.72742072974897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554128230968366,0,0,0,0,0,0,0,1.50045548042201,0.309157587715317,0,0.37223371266318,0.168776332241266,0,0.504867548488229,0,0.161646056818812,0.710019185033229,0.201504196455281,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0.715880777515084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,13.1740939362482,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,27.2239018033096,0,0,0,0,0,0,0,0,0.432164393964449,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,3.64095327882873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38328142328561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624902039810533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5936204863088,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91529616043611,0,0,0,0,0,0,0,0,1.72742072974897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | ||
|short_description=p@chr10:50791370..50791375,- | |short_description=p@chr10:50791370..50791375,- | ||
}} | }} |
Latest revision as of 14:01, 23 July 2015
Short description: | p@chr10:50791370..50791375, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:50791370..50791375, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 6.40e-23 | 1 |
immature NK T cell | 6.40e-23 | 1 |
effector T cell | 6.40e-23 | 1 |
mature NK T cell | 6.40e-23 | 1 |
immature NK T cell stage IV | 6.40e-23 | 1 |
immature NK T cell stage I | 6.40e-23 | 1 |
immature NK T cell stage II | 6.40e-23 | 1 |
immature NK T cell stage III | 6.40e-23 | 1 |
bone matrix secreting cell | 1.65e-12 | 2 |
osteocyte | 1.65e-12 | 2 |
osteoclast | 1.65e-12 | 2 |
thymocyte | 3.62e-12 | 2 |
double negative thymocyte | 3.62e-12 | 2 |
double-positive, alpha-beta thymocyte | 3.62e-12 | 2 |
DN4 thymocyte | 3.62e-12 | 2 |
DN1 thymic pro-T cell | 3.62e-12 | 2 |
DN2 thymocyte | 3.62e-12 | 2 |
DN3 thymocyte | 3.62e-12 | 2 |
immature single positive thymocyte | 3.62e-12 | 2 |
early T lineage precursor | 3.62e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.34e-23 | 1 |
skin benign neoplasm | 1.34e-23 | 1 |
integumentary system benign neoplasm | 1.34e-23 | 1 |
dermis tumor | 1.34e-23 | 1 |
cutaneous fibrous histiocytoma | 1.34e-23 | 1 |
anemia | 2.10e-23 | 1 |
pleomorphic carcinoma | 2.62e-23 | 1 |
disease of anatomical entity | 2.52e-14 | 39 |
giant cell tumor | 1.65e-12 | 2 |
bone giant cell tumor | 1.65e-12 | 2 |
hematopoietic system disease | 2.07e-12 | 2 |
benign neoplasm | 6.87e-07 | 4 |
cardiovascular system disease | 7.70e-07 | 4 |