FFCP PHASE1:Hg19::chr11:116706961..116706976,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:116706961..116706976,- | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_at_chr11:116706961..116706976,- | |||
|id=chr11:116706961..116706976,- | |||
|ontology_enrichment_celltype=CL:0000181!1.69e-26!12;CL:0000417!1.69e-26!12;CL:0000668!1.69e-26!12;CL:0000414!1.69e-26!12;CL:0000412!1.69e-26!12;CL:0000182!1.69e-26!12;CL:0000223!1.02e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.04e-50;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.58e-50,12;CL:0000223,2.60e-16,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.85e-40;11!UBERON:0009497;6.00e-34;13!UBERON:0001041;1.38e-14;30!UBERON:0003104;3.66e-14;31!CL:0000223;9.07e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.09e-27!19;UBERON:0006925!3.09e-27!19;UBERON:0008836!3.09e-27!19;UBERON:0008835!2.52e-23!22;UBERON:0003894!2.52e-23!22;UBERON:0009854!3.01e-22!23;UBERON:0007499!2.38e-20!25;UBERON:0009497!2.38e-20!25;UBERON:0000015!2.38e-20!25;UBERON:0002423!2.38e-20!25;UBERON:0006235!2.38e-20!25;UBERON:0004161!2.38e-20!25;UBERON:0005057!1.64e-19!26;UBERON:0009856!1.64e-19!26;UBERON:0002365!3.98e-16!31;UBERON:0002330!3.98e-16!31;UBERON:0002368!4.09e-14!35;UBERON:0003929!5.20e-13!54;UBERON:0004921!2.95e-11!129;UBERON:0004185!2.95e-11!129;UBERON:0000949!1.20e-10!45;UBERON:0002530!1.22e-09!59;UBERON:0001007!8.24e-09!155;UBERON:0001555!8.24e-09!155;UBERON:0007026!8.24e-09!155;UBERON:0005172!1.91e-08!55;UBERON:0005173!1.91e-08!55;UBERON:0000160!6.16e-08!27;UBERON:0005911!7.01e-08!82;UBERON:0004119!8.31e-08!169;UBERON:0000925!8.31e-08!169;UBERON:0006595!8.31e-08!169;UBERON:0002417!1.80e-07!61;UBERON:0000916!1.80e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.04e-52;19!UBERON:0006925;5.04e-52;19!UBERON:0002423;2.38e-39;25!UBERON:0002365;1.28e-30;31!UBERON:0002330;1.28e-30;31!UBERON:0002368;7.65e-27;33!UBERON:0002108;1.11e-22;4!UBERON:0000949;3.26e-19;43!UBERON:0001007;2.81e-12;81!UBERON:0002530;3.49e-12;57!UBERON:0005172;8.89e-12;52!UBERON:0005173;8.89e-12;52!UBERON:0000160;3.42e-11;17!UBERON:0002417;6.44e-11;58!UBERON:0000916;6.44e-11;58!UBERON:0005409;8.25e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.52e-52,19;UBERON:0006925,5.52e-52,19;UBERON:0008836,5.52e-52,19;UBERON:0008835,8.62e-45,22;UBERON:0003894,8.62e-45,22;UBERON:0009854,8.26e-43,23;UBERON:0007499,2.54e-39,25;UBERON:0009497,2.54e-39,25;UBERON:0000015,2.54e-39,25;UBERON:0002423,2.54e-39,25;UBERON:0006235,2.54e-39,25;UBERON:0004161,2.54e-39,25;UBERON:0009856,8.90e-38,26;UBERON:0002365,1.50e-31,31;UBERON:0002330,1.50e-31,31;UBERON:0002368,7.61e-28,35;UBERON:0003929,1.50e-26,54;UBERON:0002108,1.15e-22,4;UBERON:0000949,1.86e-21,45;UBERON:0002530,5.94e-20,59;UBERON:0004921,8.70e-19,118;UBERON:0005172,1.01e-17,54;UBERON:0005173,1.01e-17,54;UBERON:0005911,4.77e-17,82;UBERON:0002417,7.45e-16,60;UBERON:0000916,7.45e-16,60;UBERON:0001007,5.28e-15,145;UBERON:0001555,5.28e-15,145;UBERON:0007026,5.28e-15,145;UBERON:0004119,1.91e-13,160;UBERON:0000925,1.91e-13,160;UBERON:0006595,1.91e-13,160;UBERON:0000160,3.29e-11,17;UBERON:0001041,1.28e-10,87;UBERON:0005256,5.00e-09,122;UBERON:0011216,5.12e-09,223;UBERON:0005177,5.31e-09,101;UBERON:0000490,7.96e-09,148;UBERON:0009569,5.18e-08,112;UBERON:0005409,7.90e-08,25;UBERON:0003914,1.27e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,6.87979051674338,5.90789906681404,0,2.58275720940538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14234568938218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91555844261345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23647103495506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,2.12714592229504,1.31865373409866,2.49393112260484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4828054983836,23.8512400041998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16414048242573,2.18559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:116706961..116706976,- | |||
}} |
Latest revision as of 18:29, 23 July 2015
Short description: | p@chr11:116706961..116706976, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:116706961..116706976, - |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.58e-50 | 12 |
endodermal cell | 2.60e-16 | 58 |