FFCP PHASE1:Hg19::chr11:129511955..129511961,-: Difference between revisions
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|id=chr11:129511955..129511961,-
|short_description=p@chr11:129511955..129511961,-
|description=CAGE_peak_at_chr11:129511955..129511961,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:129511955..129511961,- | |||
|description=CAGE_peak_at_chr11:129511955..129511961,- | |||
|id=chr11:129511955..129511961,- | |||
|ontology_enrichment_celltype=CL:0002076!4.48e-21!43;CL:0002368!1.02e-19!13;CL:0000223!1.47e-18!59;CL:0002621!6.91e-14!3;CL:0002202!1.65e-11!9;CL:0002632!1.65e-11!9;CL:0000240!2.25e-11!6;CL:0000311!2.25e-11!6;CL:0000079!2.25e-11!6;CL:0000237!2.25e-11!6;CL:0000036!2.25e-11!6;CL:0000357!2.25e-11!6;CL:0000114!2.25e-11!6;CL:0000066!7.57e-11!254;CL:0001014!1.82e-09!2;CL:0001016!1.82e-09!2;CL:0002251!8.27e-09!21;CL:0000076!3.45e-08!62;CL:0000312!4.91e-08!5;CL:0002159!8.55e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002621;4.93e-54;3!CL:0002076;1.06e-13;42!CL:0002368;3.48e-13;13!CL:0002202;6.10e-09;9!CL:0002632;6.10e-09;9!CL:0002251;1.04e-08;20!CL:0002328;2.71e-07;3!CL:0000307;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,5.41e-54,3;CL:0002076,2.97e-15,42;CL:0000223,6.89e-15,58;CL:0002368,4.28e-13,13;CL:0002202,7.45e-09,9;CL:0002632,7.45e-09,9;CL:0002251,1.05e-08,20;CL:0002328,2.97e-07,3;CL:0000068,3.35e-07,3;CL:0000069,3.35e-07,3;CL:0000307,3.35e-07,3;CL:0000377,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.97e-19;1!CL:0000223;2.43e-09;58!CL:0000377;2.71e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!5.24e-17!14;DOID:4074!2.24e-09!2;DOID:4905!2.24e-09!2;DOID:3498!2.24e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:4074;1.72e-10;2!DOID:4905;1.72e-10;2!DOID:3498;1.72e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.72e-10,2;DOID:4905,1.72e-10,2;DOID:3498,1.72e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001949!6.91e-14!3;UBERON:0001004!1.80e-12!72;UBERON:0007196!5.05e-10!14;UBERON:0001558!5.05e-10!14;UBERON:0004119!3.98e-09!169;UBERON:0000925!3.98e-09!169;UBERON:0006595!3.98e-09!169;UBERON:0000166!1.13e-08!21;UBERON:0000065!1.30e-08!53;UBERON:0000165!3.60e-08!28;UBERON:0000930!3.60e-08!28;UBERON:0003729!1.05e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.93e-54;3!UBERON:0003929;1.19e-23;7!UBERON:0003350;8.58e-21;8!UBERON:0001828;8.58e-21;8!UBERON:0000486;4.22e-14;12!UBERON:0004807;2.12e-13;22!UBERON:0003729;4.56e-13;13!UBERON:0010371;6.44e-10;31!UBERON:0000161;3.88e-09;19!UBERON:0000166;3.88e-09;19!UBERON:0000344;1.04e-08;20!UBERON:0005911;5.97e-08;36!UBERON:0001043;2.71e-07;3!UBERON:0004815;2.71e-07;3!UBERON:0002031;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,5.41e-54,3;UBERON:0003350,8.88e-21,8;UBERON:0001828,8.88e-21,8;UBERON:0003729,4.65e-13,13;UBERON:0004807,1.40e-10,28;UBERON:0000344,1.05e-08,20;UBERON:0001004,1.35e-08,74;UBERON:0000166,5.79e-08,22;UBERON:0001043,2.32e-07,3;UBERON:0009143,2.32e-07,3;UBERON:0004815,2.97e-07,3;UBERON:0002031,2.97e-07,3 | |||
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| ||
|short_description=p@chr11:129511955..129511961,- | |||
}} | }} |
Latest revision as of 19:56, 23 July 2015
Short description: | p@chr11:129511955..129511961, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:129511955..129511961, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 5.41e-54 | 3 |
endo-epithelial cell | 2.97e-15 | 42 |
endodermal cell | 6.89e-15 | 58 |
respiratory epithelial cell | 4.28e-13 | 13 |
epithelial cell of tracheobronchial tree | 7.45e-09 | 9 |
epithelial cell of lower respiratory tract | 7.45e-09 | 9 |
epithelial cell of alimentary canal | 1.05e-08 | 20 |
bronchial epithelial cell | 2.97e-07 | 3 |
duct epithelial cell | 3.35e-07 | 3 |
branched duct epithelial cell | 3.35e-07 | 3 |
tracheal epithelial cell | 3.35e-07 | 3 |
tracheoblast | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 5.41e-54 | 3 |
epithelium of mucosa | 8.88e-21 | 8 |
gingiva | 8.88e-21 | 8 |
mouth mucosa | 4.65e-13 | 13 |
respiratory system epithelium | 1.40e-10 | 28 |
mucosa | 1.05e-08 | 20 |
respiratory system | 1.35e-08 | 74 |
oral opening | 5.79e-08 | 22 |
esophagus | 2.32e-07 | 3 |
esophageal region | 2.32e-07 | 3 |
lower respiratory tract epithelium | 2.97e-07 | 3 |
epithelium of bronchus | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.72e-10 | 2 |
pancreatic carcinoma | 1.72e-10 | 2 |
pancreatic ductal adenocarcinoma | 1.72e-10 | 2 |