FFCP PHASE1:Hg19::chr11:130817774..130817782,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:130817774..130817782,+ | |||
|description=CAGE_peak_at_chr11:130817774..130817782,+ | |description=CAGE_peak_at_chr11:130817774..130817782,+ | ||
|id=chr11:130817774..130817782,+ | |id=chr11:130817774..130817782,+ | ||
|ontology_enrichment_celltype=CL:0002076!3.63e-21!43;CL:0000244!1.57e-19!4;CL:0000731!1.57e-19!4;CL:0000066!4.52e-18!254;CL:0002368!2.82e-17!13;CL:0000223!1.60e-14!59;CL:0000076!6.44e-14!62;CL:0002202!8.49e-09!9;CL:0002632!8.49e-09!9;CL:0000240!1.53e-07!6;CL:0000311!1.53e-07!6;CL:0000079!1.53e-07!6;CL:0000237!1.53e-07!6;CL:0000036!1.53e-07!6;CL:0000357!1.53e-07!6;CL:0000114!1.53e-07!6;CL:0002328!1.86e-07!3;CL:0002251!1.93e-07!21;CL:0000068!2.32e-07!3;CL:0000069!2.32e-07!3;CL:0000307!2.32e-07!3;CL:0000377!2.32e-07!3;CL:0002231!7.31e-07!3 | |ontology_enrichment_celltype=CL:0002076!3.63e-21!43;CL:0000244!1.57e-19!4;CL:0000731!1.57e-19!4;CL:0000066!4.52e-18!254;CL:0002368!2.82e-17!13;CL:0000223!1.60e-14!59;CL:0000076!6.44e-14!62;CL:0002202!8.49e-09!9;CL:0002632!8.49e-09!9;CL:0000240!1.53e-07!6;CL:0000311!1.53e-07!6;CL:0000079!1.53e-07!6;CL:0000237!1.53e-07!6;CL:0000036!1.53e-07!6;CL:0000357!1.53e-07!6;CL:0000114!1.53e-07!6;CL:0002328!1.86e-07!3;CL:0002251!1.93e-07!21;CL:0000068!2.32e-07!3;CL:0000069!2.32e-07!3;CL:0000307!2.32e-07!3;CL:0000377!2.32e-07!3;CL:0002231!7.31e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002327;9.82e-26;4!CL:0002368;6.43e-18;13!CL:0000317;1.37e-13;2!CL:1000448;1.37e-13;2!CL:0002308;1.37e-13;2!CL:0002140;1.37e-13;2!CL:0002202;5.08e-12;9!CL:0002632;5.08e-12;9!CL:0002328;1.05e-09;3!CL:0000307;1.67e-09;3!CL:0000244;1.92e-07;4!CL:0000731;1.92e-07;4 | |ontology_enrichment_celltype_v019=CL:0002327;9.82e-26;4!CL:0002368;6.43e-18;13!CL:0000317;1.37e-13;2!CL:1000448;1.37e-13;2!CL:0002308;1.37e-13;2!CL:0002140;1.37e-13;2!CL:0002202;5.08e-12;9!CL:0002632;5.08e-12;9!CL:0002328;1.05e-09;3!CL:0000307;1.67e-09;3!CL:0000244;1.92e-07;4!CL:0000731;1.92e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.11e-25,4;CL:0002368,6.81e-18,13;CL:0000317,1.37e-13,2;CL:1000448,1.37e-13,2;CL:0002308,1.37e-13,2;CL:0002140,1.37e-13,2;CL:0002202,5.52e-12,9;CL:0002632,5.52e-12,9;CL:0002328,1.10e-09,3;CL:0000068,1.81e-09,3;CL:0000069,1.81e-09,3;CL:0000307,1.81e-09,3;CL:0000377,1.81e-09,3;CL:0000244,1.80e-07,4;CL:0000731,1.80e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;1.67e-09;3 | |ontology_enrichment_development_v019=CL:0000377;1.67e-09;3 | ||
|ontology_enrichment_disease=DOID:1749!3.72e-39!14 | |ontology_enrichment_disease=DOID:1749!3.72e-39!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!1.78e-23!5;UBERON:0003729!4.77e-23!5;UBERON:0005910!1.56e-19!6;UBERON:0003343!7.43e-19!4;UBERON:0004785!7.43e-19!4;UBERON:0000344!3.10e-13!12;UBERON:0001004!2.53e-11!72;UBERON:0000974!2.69e-11!10;UBERON:0004119!2.64e-10!169;UBERON:0000925!2.64e-10!169;UBERON:0006595!2.64e-10!169;UBERON:0000161!4.97e-09!35;UBERON:0000065!1.42e-08!53;UBERON:0004815!1.86e-07!3;UBERON:0002031!1.86e-07!3;UBERON:0000166!2.05e-07!21;UBERON:0000165!3.20e-07!28;UBERON:0000930!3.20e-07!28;UBERON:0001723!5.06e-07!3;UBERON:0001033!5.06e-07!3;UBERON:0010056!5.06e-07!3 | |ontology_enrichment_uberon=UBERON:0000365!1.78e-23!5;UBERON:0003729!4.77e-23!5;UBERON:0005910!1.56e-19!6;UBERON:0003343!7.43e-19!4;UBERON:0004785!7.43e-19!4;UBERON:0000344!3.10e-13!12;UBERON:0001004!2.53e-11!72;UBERON:0000974!2.69e-11!10;UBERON:0004119!2.64e-10!169;UBERON:0000925!2.64e-10!169;UBERON:0006595!2.64e-10!169;UBERON:0000161!4.97e-09!35;UBERON:0000065!1.42e-08!53;UBERON:0004815!1.86e-07!3;UBERON:0002031!1.86e-07!3;UBERON:0000166!2.05e-07!21;UBERON:0000165!3.20e-07!28;UBERON:0000930!3.20e-07!28;UBERON:0001723!5.06e-07!3;UBERON:0001033!5.06e-07!3;UBERON:0010056!5.06e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;9.82e-26;4!UBERON:0002419;1.37e-13;2!UBERON:0007771;1.37e-13;2!UBERON:0003297;1.37e-13;2!UBERON:0001821;1.37e-13;2!UBERON:0003487;1.37e-13;2!UBERON:0001820;1.37e-13;2!UBERON:0004815;1.05e-09;3!UBERON:0002031;1.05e-09;3!UBERON:0002365;1.04e-07;31!UBERON:0002330;1.04e-07;31!UBERON:0007196;1.37e-07;15!UBERON:0001558;1.37e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0001911;9.82e-26;4!UBERON:0002419;1.37e-13;2!UBERON:0007771;1.37e-13;2!UBERON:0003297;1.37e-13;2!UBERON:0001821;1.37e-13;2!UBERON:0003487;1.37e-13;2!UBERON:0001820;1.37e-13;2!UBERON:0004815;1.05e-09;3!UBERON:0002031;1.05e-09;3!UBERON:0002365;1.04e-07;31!UBERON:0002330;1.04e-07;31!UBERON:0007196;1.37e-07;15!UBERON:0001558;1.37e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.11e-25,4;UBERON:0005333,1.11e-25,4;UBERON:0008425,1.11e-25,4;UBERON:0005311,1.11e-25,4;UBERON:0002419,1.37e-13,2;UBERON:0007771,1.37e-13,2;UBERON:0003297,1.37e-13,2;UBERON:0001821,1.37e-13,2;UBERON:0003487,1.37e-13,2;UBERON:0001820,1.37e-13,2;UBERON:0005089,1.37e-13,2;UBERON:0005088,1.37e-13,2;UBERON:0000076,2.20e-13,8;UBERON:0004815,1.10e-09,3;UBERON:0002031,1.10e-09,3;UBERON:0002365,7.53e-08,31;UBERON:0005085,7.53e-08,31;UBERON:0002330,7.53e-08,31;UBERON:0007196,1.44e-07,15;UBERON:0001558,1.44e-07,15 | |||
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|short_description=p@chr11:130817774..130817782,+ | |short_description=p@chr11:130817774..130817782,+ | ||
}} | }} |
Latest revision as of 20:02, 23 July 2015
Short description: | p@chr11:130817774..130817782, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:130817774..130817782, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.11e-25 | 4 |
respiratory epithelial cell | 6.81e-18 | 13 |
sebum secreting cell | 1.37e-13 | 2 |
epithelial cell of sweat gland | 1.37e-13 | 2 |
epithelial cell of skin gland | 1.37e-13 | 2 |
acinar cell of sebaceous gland | 1.37e-13 | 2 |
epithelial cell of tracheobronchial tree | 5.52e-12 | 9 |
epithelial cell of lower respiratory tract | 5.52e-12 | 9 |
bronchial epithelial cell | 1.10e-09 | 3 |
duct epithelial cell | 1.81e-09 | 3 |
branched duct epithelial cell | 1.81e-09 | 3 |
tracheal epithelial cell | 1.81e-09 | 3 |
tracheoblast | 1.81e-09 | 3 |
transitional epithelial cell | 1.80e-07 | 4 |
urothelial cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.11e-25 | 4 |
mammary bud | 1.11e-25 | 4 |
mammary ridge | 1.11e-25 | 4 |
mammary placode | 1.11e-25 | 4 |
skin gland | 1.37e-13 | 2 |
epidermis gland | 1.37e-13 | 2 |
gland of integumental system | 1.37e-13 | 2 |
sebaceous gland | 1.37e-13 | 2 |
skin sebaceous gland | 1.37e-13 | 2 |
sweat gland | 1.37e-13 | 2 |
sweat gland placode | 1.37e-13 | 2 |
sebaceous gland placode | 1.37e-13 | 2 |
external ectoderm | 2.20e-13 | 8 |
lower respiratory tract epithelium | 1.10e-09 | 3 |
epithelium of bronchus | 1.10e-09 | 3 |
exocrine gland | 7.53e-08 | 31 |
ectodermal placode | 7.53e-08 | 31 |
exocrine system | 7.53e-08 | 31 |
tracheobronchial tree | 1.44e-07 | 15 |
lower respiratory tract | 1.44e-07 | 15 |