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FFCP PHASE1:Hg19::chr11:268283..268304,+: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2|description=CAGE_peak_at_chr11:268283..268304,+|id=chr11:268283..268304,+|ontology_enrichment_celltype=CL:0000037!5.02e-23!172;CL:0000566!5.02e-23!172;CL:0002032!5.06e-21!165;CL:0000837!5.06e-21!165;CL:0000988!5.59e-21!182;CL:0000738!1.96e-19!140;CL:0002087!1.06e-16!119;CL:0000763!2.34e-15!112;CL:0000049!2.34e-15!112;CL:0002031!1.73e-13!124;CL:0000766!2.22e-13!76;CL:0002057!4.14e-13!42;CL:0000860!6.46e-12!45;CL:0002393!2.79e-09!9;CL:0002397!2.79e-09!9;CL:0002194!4.40e-09!63;CL:0000576!4.40e-09!63;CL:0000040!4.40e-09!63;CL:0000559!4.40e-09!63;CL:0000775!9.30e-09!3;CL:0002009!1.17e-08!65;CL:0000839!1.20e-08!70;CL:0000557!1.87e-08!71;CL:0000875!2.89e-08!3;CL:0002396!2.89e-08!3;CL:0000094!5.58e-08!8;CL:0000945!1.74e-07!24;CL:0000826!1.74e-07!24;CL:0000842!2.34e-07!3;CL:0000817!2.55e-07!3|ontology_enrichment_celltype_v019=CL:0000775;8.82e-51;3!CL:0000094;6.84e-34;8!CL:0000081;8.77e-25;11!CL:0000771;8.32e-10;2|ontology_enrichment_celltype_v019_2=CL:0000775,8.11e-51,3;CL:0000094,6.84e-34,8;CL:0000081,8.77e-25,11;CL:0000771,8.69e-10,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4960;1.22e-17;1!DOID:0070004;1.22e-17;1|ontology_enrichment_disease_v019_2=DOID:4960,1.44e-17,1;DOID:0070004,1.44e-17,1|ontology_enrichment_uberon=UBERON:0000178!1.75e-21!15;UBERON:0000179!1.75e-21!15;UBERON:0000463!1.75e-21!15;UBERON:0002390!1.51e-19!102;UBERON:0003061!1.51e-19!102;UBERON:0002193!5.09e-18!112;UBERON:0007023!3.27e-09!115;UBERON:0002371!6.83e-08!80;UBERON:0001474!5.50e-07!86|ontology_enrichment_uberon_v019=UBERON:0000178;4.30e-39;15!UBERON:0000179;4.30e-39;15!UBERON:0000463;4.30e-39;15!UBERON:0002390;6.11e-23;32!UBERON:0002193;1.26e-14;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.60e-39,15;UBERON:0000179,4.60e-39,15;UBERON:0000463,4.60e-39,15;UBERON:0002390,1.00e-07,98;UBERON:0003061,1.00e-07,98;UBERON:0002193,5.68e-07,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0,0,0,0,0.387336002901508,0,0,0.553995408531877,0,0,0.447830948479849,0,0,0.290796477559129,0,0,0,0,0.619412741790207,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0,0.845021145247767,0.212604299965044,0,0.44931452458598,0.300353785683013,0.16072558669708,0.855038231223746,0.99458338599545,0.547992461293902,1.75996244461323,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7331194071021,5.9832291840805,13.6757119433892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,1.52927441428475,3.98753031021914,0.714695326373367,0.822724546172388,1.29694662238543,2.16012574895246,0.79312517629427,0,0,0,0,0.577076851905779,0,0,0,0,0.423347165447766,0.324621940274555,0,0.228234679033192,0,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784250137270958,0.335643173951685,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.338693328263138,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0.213574825135389,0,0.828478110694391,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37771983728653,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.192687675289379,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,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{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr11:268283..268304,+
|coexpression_cluster_id=C2
|description=CAGE_peak_at_chr11:268283..268304,+
|id=chr11:268283..268304,+
|ontology_enrichment_celltype=CL:0000037!5.02e-23!172;CL:0000566!5.02e-23!172;CL:0002032!5.06e-21!165;CL:0000837!5.06e-21!165;CL:0000988!5.59e-21!182;CL:0000738!1.96e-19!140;CL:0002087!1.06e-16!119;CL:0000763!2.34e-15!112;CL:0000049!2.34e-15!112;CL:0002031!1.73e-13!124;CL:0000766!2.22e-13!76;CL:0002057!4.14e-13!42;CL:0000860!6.46e-12!45;CL:0002393!2.79e-09!9;CL:0002397!2.79e-09!9;CL:0002194!4.40e-09!63;CL:0000576!4.40e-09!63;CL:0000040!4.40e-09!63;CL:0000559!4.40e-09!63;CL:0000775!9.30e-09!3;CL:0002009!1.17e-08!65;CL:0000839!1.20e-08!70;CL:0000557!1.87e-08!71;CL:0000875!2.89e-08!3;CL:0002396!2.89e-08!3;CL:0000094!5.58e-08!8;CL:0000945!1.74e-07!24;CL:0000826!1.74e-07!24;CL:0000842!2.34e-07!3;CL:0000817!2.55e-07!3
|ontology_enrichment_celltype_v019=CL:0000775;8.82e-51;3!CL:0000094;6.84e-34;8!CL:0000081;8.77e-25;11!CL:0000771;8.32e-10;2
|ontology_enrichment_celltype_v019_2=CL:0000775,8.11e-51,3;CL:0000094,6.84e-34,8;CL:0000081,8.77e-25,11;CL:0000771,8.69e-10,2
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:4960;1.22e-17;1!DOID:0070004;1.22e-17;1
|ontology_enrichment_disease_v019_2=DOID:4960,1.44e-17,1;DOID:0070004,1.44e-17,1
|ontology_enrichment_uberon=UBERON:0000178!1.75e-21!15;UBERON:0000179!1.75e-21!15;UBERON:0000463!1.75e-21!15;UBERON:0002390!1.51e-19!102;UBERON:0003061!1.51e-19!102;UBERON:0002193!5.09e-18!112;UBERON:0007023!3.27e-09!115;UBERON:0002371!6.83e-08!80;UBERON:0001474!5.50e-07!86
|ontology_enrichment_uberon_v019=UBERON:0000178;4.30e-39;15!UBERON:0000179;4.30e-39;15!UBERON:0000463;4.30e-39;15!UBERON:0002390;6.11e-23;32!UBERON:0002193;1.26e-14;42
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.60e-39,15;UBERON:0000179,4.60e-39,15;UBERON:0000463,4.60e-39,15;UBERON:0002390,1.00e-07,98;UBERON:0003061,1.00e-07,98;UBERON:0002193,5.68e-07,108
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0,0,0,0,0.387336002901508,0,0,0.553995408531877,0,0,0.447830948479849,0,0,0.290796477559129,0,0,0,0,0.619412741790207,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0,0.845021145247767,0.212604299965044,0,0.44931452458598,0.300353785683013,0.16072558669708,0.855038231223746,0.99458338599545,0.547992461293902,1.75996244461323,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7331194071021,5.9832291840805,13.6757119433892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,1.52927441428475,3.98753031021914,0.714695326373367,0.822724546172388,1.29694662238543,2.16012574895246,0.79312517629427,0,0,0,0,0.577076851905779,0,0,0,0,0.423347165447766,0.324621940274555,0,0.228234679033192,0,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784250137270958,0.335643173951685,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.338693328263138,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0.213574825135389,0,0.828478110694391,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37771983728653,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.192687675289379,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0.469919589899268,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr11:268283..268304,+
}}

Latest revision as of 21:15, 23 July 2015

Short description:p@chr11:268283..268304, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr11:268283..268304, +
Coexpression cluster:C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data