FFCP PHASE1:Hg19::chr11:60145301..60145329,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:60145301..60145329,-
|short_description=p@chr11:60145301..60145329,-
|description=CAGE_peak_at_chr11:60145301..60145329,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:60145301..60145329,- | |||
|coexpression_cluster_id=C883 | |||
|description=CAGE_peak_at_chr11:60145301..60145329,- | |||
|id=chr11:60145301..60145329,- | |||
|ontology_enrichment_celltype=CL:0002057!2.34e-68!42;CL:0000860!4.59e-63!45;CL:0002009!6.30e-61!65;CL:0002194!3.13e-60!63;CL:0000576!3.13e-60!63;CL:0000040!3.13e-60!63;CL:0000559!3.13e-60!63;CL:0000766!7.31e-59!76;CL:0000557!1.81e-57!71;CL:0000839!1.04e-55!70;CL:0002087!7.00e-54!119;CL:0000738!2.08e-53!140;CL:0002031!1.82e-48!124;CL:0000037!9.24e-44!172;CL:0000566!9.24e-44!172;CL:0000988!1.87e-40!182;CL:0000763!1.76e-39!112;CL:0000049!1.76e-39!112;CL:0002032!3.38e-39!165;CL:0000837!3.38e-39!165;CL:0002393!2.42e-23!9;CL:0002397!2.42e-23!9;CL:0000134!4.52e-14!358;CL:0002320!1.72e-13!365;CL:0000219!1.86e-11!390;CL:0000048!1.19e-09!430;CL:0000723!2.68e-09!436;CL:0000875!5.91e-09!3;CL:0002396!5.91e-09!3;CL:0000034!7.59e-09!444;CL:0000842!1.21e-08!3;CL:0000767!1.67e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.98e-68;33!CL:0002057;4.98e-68;33!CL:0000576;1.24e-63;48!CL:0000473;4.93e-47;39!CL:0000234;4.93e-47;39!CL:0000766;1.12e-38;69!CL:0002393;4.65e-33;6!CL:0002397;4.65e-33;6!CL:0000875;1.18e-17;3!CL:0002396;1.18e-17;3!CL:0002087;2.31e-17;104!CL:0000226;8.13e-17;3!CL:0000842;8.13e-17;3!CL:0000763;1.54e-16;100!CL:0000767;1.56e-16;3!CL:0000738;1.28e-11;136!CL:0000988;3.98e-09;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.55e-119,42;CL:0002057,3.55e-119,42;CL:0000473,1.52e-103,48;CL:0000234,1.52e-103,48;CL:0002194,1.19e-81,59;CL:0000576,1.19e-81,59;CL:0000040,1.19e-81,59;CL:0000559,1.19e-81,59;CL:0000766,3.15e-80,72;CL:0002009,8.00e-79,61;CL:0000839,1.70e-72,66;CL:0000557,2.43e-71,67;CL:0000763,1.10e-51,108;CL:0000049,1.10e-51,108;CL:0002393,6.63e-49,9;CL:0002397,6.63e-49,9;CL:0002087,2.79e-48,115;CL:0000738,3.18e-48,136;CL:0000037,6.90e-38,168;CL:0002031,1.92e-37,120;CL:0000988,1.20e-35,177;CL:0002032,1.03e-32,161;CL:0000837,1.03e-32,161;CL:0000875,1.43e-17,3;CL:0002396,1.43e-17,3;CL:0000226,6.72e-17,3;CL:0000842,6.72e-17,3;CL:0000767,1.36e-16,3;CL:0000134,1.33e-14,354;CL:0002320,3.44e-14,361;CL:0000219,9.76e-13,386;CL:0000048,5.87e-11,427;CL:0000723,1.03e-10,433;CL:0000034,2.15e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.49e-79;42!CL:0000049;1.28e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.13e-60!102;UBERON:0003061!2.13e-60!102;UBERON:0002371!1.41e-54!80;UBERON:0002193!1.07e-53!112;UBERON:0001474!6.95e-50!86;UBERON:0004765!1.40e-40!101;UBERON:0001434!1.40e-40!101;UBERON:0002405!2.11e-37!115;UBERON:0003081!7.45e-22!216;UBERON:0002204!1.49e-19!167;UBERON:0002384!2.24e-13!375;UBERON:0000178!3.38e-07!15;UBERON:0000179!3.38e-07!15;UBERON:0000463!3.38e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.65e-62,76;UBERON:0002390,1.21e-57,98;UBERON:0003061,1.21e-57,98;UBERON:0001474,2.30e-57,82;UBERON:0004765,8.63e-52,90;UBERON:0002193,8.77e-52,108;UBERON:0002405,6.06e-50,93;UBERON:0001434,4.61e-46,100;UBERON:0002204,3.02e-25,167;UBERON:0003081,1.03e-24,203;UBERON:0000926,1.21e-13,315;UBERON:0004120,1.21e-13,315;UBERON:0006603,1.21e-13,315;UBERON:0002384,1.26e-13,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,1.96682138424452,4.60595277716655,1.23852898652861,0,0,0,0,0,0.293600439334847,4.43196326825502,10.2277668209772,1.73608696572681,0.223915474239924,0,0.257575567634187,2.61716829803216,0,1.21292030593908,3.25400651667958,0,1.85823822537062,1.43846196161075,0.256160706529101,1.6553756092201,9.3081333798887,0.645484683583826,0,3.9530891303947,0,2.9214052977861,11.9372718024652,0,5.75403413219137,0.989553900560148,0.598390972864896,2.13112375266347,7.2552309657146,0,1.86846674698672,2.00998932205395,0,1.3031330682307,5.44859552370032,1.10483290796269,3.79754864929061,2.5350634357433,7.22854619881148,7.54771123830153,3.14520167210186,7.0583139635508,6.75047464127737,5.13022938734247,6.16641699317179,5.29726045917438,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,5.39285502046542,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,1.96682138424452,4.60595277716655,1.23852898652861,0,0,0,0,0,0.293600439334847,4.43196326825502,10.2277668209772,1.73608696572681,0.223915474239924,0,0.257575567634187,2.61716829803216,0,1.21292030593908,3.25400651667958,0,1.85823822537062,1.43846196161075,0.256160706529101,1.6553756092201,9.3081333798887,0.645484683583826,0,3.9530891303947,0,2.9214052977861,11.9372718024652,0,5.75403413219137,0.989553900560148,0.598390972864896,2.13112375266347,7.2552309657146,0,1.86846674698672,2.00998932205395,0,1.3031330682307,5.44859552370032,1.10483290796269,3.79754864929061,2.5350634357433,7.22854619881148,7.54771123830153,3.14520167210186,7.0583139635508,6.75047464127737,5.13022938734247,6.16641699317179,5.29726045917438,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,5.39285502046542,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr11:60145301..60145329,- | |||
}} | }} |
Latest revision as of 23:14, 23 July 2015
Short description: | p@chr11:60145301..60145329, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60145301..60145329, - |
Coexpression cluster: | C883_CD14_CD14CD16_Monocytederived_spleen_Macrophage_Basophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.65e-62 | 76 |
hematopoietic system | 1.21e-57 | 98 |
blood island | 1.21e-57 | 98 |
bone element | 2.30e-57 | 82 |
skeletal element | 8.63e-52 | 90 |
hemolymphoid system | 8.77e-52 | 108 |
immune system | 6.06e-50 | 93 |
skeletal system | 4.61e-46 | 100 |
musculoskeletal system | 3.02e-25 | 167 |
lateral plate mesoderm | 1.03e-24 | 203 |
mesoderm | 1.21e-13 | 315 |
mesoderm-derived structure | 1.21e-13 | 315 |
presumptive mesoderm | 1.21e-13 | 315 |
connective tissue | 1.26e-13 | 371 |