FFCP PHASE1:Hg19::chr11:72281596..72281657,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:72281596..72281657,+
|short_description=p1@ENST00000450804,p1@uc001osl.2
|description=CAGE_peak_1_at_ENST00000450804_5end,CAGE_peak_1_at_uc001osl.2_5end
|...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_ENST00000450804,uc001osl.2_5end | |||
|cluster_id=chr11:72281596..72281657,+ | |||
|description=CAGE_peak_1_at_ENST00000450804_5end,CAGE_peak_1_at_uc001osl.2_5end | |||
|id=chr11:72281596..72281657,+ | |||
|ontology_enrichment_celltype=CL:0000860!4.79e-25!45;CL:0002057!2.09e-21!42;CL:0002194!2.28e-20!63;CL:0000576!2.28e-20!63;CL:0000040!2.28e-20!63;CL:0000559!2.28e-20!63;CL:0002009!2.30e-19!65;CL:0000839!4.07e-17!70;CL:0000557!1.04e-16!71;CL:0000766!9.54e-16!76;CL:0000763!3.16e-08!112;CL:0000049!3.16e-08!112;CL:0002087!3.34e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.62e-49;33!CL:0002057;7.62e-49;33!CL:0000473;4.26e-36;39!CL:0000234;4.26e-36;39!CL:0000576;6.88e-22;48!CL:0000766;3.88e-14;69!CL:0002593;1.13e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.47e-39,42;CL:0002057,2.47e-39,42;CL:0000473,1.27e-36,48;CL:0000234,1.27e-36,48;CL:0002194,1.26e-30,59;CL:0000576,1.26e-30,59;CL:0000040,1.26e-30,59;CL:0000559,1.26e-30,59;CL:0002009,2.05e-29,61;CL:0000839,1.05e-26,66;CL:0000557,3.28e-26,67;CL:0000766,6.03e-24,72;CL:0000763,7.72e-14,108;CL:0000049,7.72e-14,108;CL:0002087,1.29e-12,115;CL:0002031,7.85e-12,120;CL:0000738,1.01e-09,136;CL:0002593,8.81e-08,2;CL:0002032,2.66e-07,161;CL:0000837,2.66e-07,161;CL:0000037,9.24e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;5.20e-31;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.51e-14!80;UBERON:0002390!3.83e-13!102;UBERON:0003061!3.83e-13!102;UBERON:0002193!5.59e-13!112;UBERON:0001474!1.02e-12!86;UBERON:0002405!1.55e-11!115;UBERON:0003081!5.60e-11!216;UBERON:0002204!3.24e-10!167;UBERON:0004765!6.91e-10!101;UBERON:0001434!6.91e-10!101;UBERON:0000926!1.83e-08!448;UBERON:0004120!1.83e-08!448;UBERON:0006603!1.83e-08!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.13e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.92e-24,76;UBERON:0001474,5.35e-22,82;UBERON:0002405,2.80e-20,93;UBERON:0004765,1.89e-19,90;UBERON:0002390,2.55e-17,98;UBERON:0003061,2.55e-17,98;UBERON:0001434,7.68e-17,100;UBERON:0002193,1.67e-16,108;UBERON:0002204,4.67e-13,167;UBERON:0003081,8.73e-13,203;UBERON:0002456,8.81e-08,2;UBERON:0000926,6.01e-07,315;UBERON:0004120,6.01e-07,315;UBERON:0006603,6.01e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,0.263766978228454,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,3.48955773070955,4.1566353805769,2.42584061187816,3.71886459049095,2.05583944010913,2.16794459626573,0.863077176966451,1.2808035326455,0,3.7922024881028,3.87290810150296,1.35426486594342,6.96496656307637,5.73102915121476,2.02251136000576,3.97909060082173,5.1348644332175,0,0.329851300186716,1.59570926097305,0,1.16083695451434,2.8369261234557,1.24564449799115,1.00499466102697,1.0429658368404,1.08594422352558,1.21079900526674,3.68277635987565,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0,0,0,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0.269662616320329,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.297262324577456,0,0,0.425325291727159,0,0,0,0,0,0,0,0,0.063497894292169,1.14596527667483,0,0,0.102827492703324,17.4198973549472,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0,0,0,0,2.46426864140871,0.532306030317022,0.869932992075073,0,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,1.56989728039846,0.359744915166629,0,0.353437207037059,0.808729926293264,0,0.421258456238981,0,1.46228093778771,4.22600587027022,0,0,0,0,0,0,0,0,0.202910376962704,2.478587984798,0.281695602532241,0,0,1.426684205925,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0,0,1.68471475667626,0.443430153536676,0.918893600827838,0,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,1.99396161812156,4.30289542638149,1.88359751044335,2.38944859545918,0.284609546029793,0.138674673013139,0,0.0979923974143777,1.21882889212564,0,0,10.7399527730885,7.82055692822185,11.2498176162897,0.0969890164884194,0,0,0,4.17300684576278,0,0.195551382734803,0,0,0,0,0,0,0,0.99402028452346,0,3.12579673969312,1.77824838730966,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.1993328406525,1.15149118391667,0,0,0,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,1.40963004463334,0.106787412567695,0,0,1.9846640872478,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0.470531639396343,0,0,0,0,0,0,0,0,0.457680136793847,0,0,1.18284119991707,1.11507737014592,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.909243296012797,0.537052785212442,0,0.796191777397232,0,0,0,0,0,0,1.04397716786085,0,0,0.244736704506468,0,4.94082315457555,0.219284049578707,0.353378291891762,0.771656153083659,1.18259708457151,0,0,0.303859956177382,0,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29280684514135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9981081234655,21.3885645945486,0,0,2.48165108531456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.732629417498771,0.106727345877715,0,0,0,0,0,0,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,0.263766978228454,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,3.48955773070955,4.1566353805769,2.42584061187816,3.71886459049095,2.05583944010913,2.16794459626573,0.863077176966451,1.2808035326455,0,3.7922024881028,3.87290810150296,1.35426486594342,6.96496656307637,5.73102915121476,2.02251136000576,3.97909060082173,5.1348644332175,0,0.329851300186716,1.59570926097305,0,1.16083695451434,2.8369261234557,1.24564449799115,1.00499466102697,1.0429658368404,1.08594422352558,1.21079900526674,3.68277635987565,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0,0,0,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0.269662616320329,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.297262324577456,0,0,0.425325291727159,0,0,0,0,0,0,0,0,0.063497894292169,1.14596527667483,0,0,0.102827492703324,17.4198973549472,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0,0,0,0,2.46426864140871,0.532306030317022,0.869932992075073,0,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,1.56989728039846,0.359744915166629,0,0.353437207037059,0.808729926293264,0,0.421258456238981,0,1.46228093778771,4.22600587027022,0,0,0,0,0,0,0,0,0.202910376962704,2.478587984798,0.281695602532241,0,0,1.426684205925,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0,0,1.68471475667626,0.443430153536676,0.918893600827838,0,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,1.99396161812156,4.30289542638149,1.88359751044335,2.38944859545918,0.284609546029793,0.138674673013139,0,0.0979923974143777,1.21882889212564,0,0,10.7399527730885,7.82055692822185,11.2498176162897,0.0969890164884194,0,0,0,4.17300684576278,0,0.195551382734803,0,0,0,0,0,0,0,0.99402028452346,0,3.12579673969312,1.77824838730966,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.1993328406525,1.15149118391667,0,0,0,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,1.40963004463334,0.106787412567695,0,0,1.9846640872478,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0.470531639396343,0,0,0,0,0,0,0,0,0.457680136793847,0,0,1.18284119991707,1.11507737014592,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.909243296012797,0.537052785212442,0,0.796191777397232,0,0,0,0,0,0,1.04397716786085,0,0,0.244736704506468,0,4.94082315457555,0.219284049578707,0.353378291891762,0.771656153083659,1.18259708457151,0,0,0.303859956177382,0,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29280684514135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9981081234655,21.3885645945486,0,0,2.48165108531456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.732629417498771,0.106727345877715,0,0,0,0,0,0,1.00636896795513,0 | ||
|short_description=p1@ENST00000450804,p1@uc001osl.2 | |||
}} | }} |
Latest revision as of 02:12, 24 July 2015
Short description: | p1@ENST00000450804, p1@uc001osl.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000450804_5end, CAGE_peak_1_at_uc001osl.2_5end |
Coexpression cluster: | NA |
Association with transcript: | -46bp_to_ENST00000450804, uc001osl.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.47e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.47e-39 | 42 |
defensive cell | 1.27e-36 | 48 |
phagocyte | 1.27e-36 | 48 |
monopoietic cell | 1.26e-30 | 59 |
monocyte | 1.26e-30 | 59 |
monoblast | 1.26e-30 | 59 |
promonocyte | 1.26e-30 | 59 |
macrophage dendritic cell progenitor | 2.05e-29 | 61 |
myeloid lineage restricted progenitor cell | 1.05e-26 | 66 |
granulocyte monocyte progenitor cell | 3.28e-26 | 67 |
myeloid leukocyte | 6.03e-24 | 72 |
myeloid cell | 7.72e-14 | 108 |
common myeloid progenitor | 7.72e-14 | 108 |
nongranular leukocyte | 1.29e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 7.85e-12 | 120 |
leukocyte | 1.01e-09 | 136 |
smooth muscle cell of the internal thoracic artery | 8.81e-08 | 2 |
hematopoietic oligopotent progenitor cell | 2.66e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.66e-07 | 161 |
hematopoietic stem cell | 9.24e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.92e-24 | 76 |
bone element | 5.35e-22 | 82 |
immune system | 2.80e-20 | 93 |
skeletal element | 1.89e-19 | 90 |
hematopoietic system | 2.55e-17 | 98 |
blood island | 2.55e-17 | 98 |
skeletal system | 7.68e-17 | 100 |
hemolymphoid system | 1.67e-16 | 108 |
musculoskeletal system | 4.67e-13 | 167 |
lateral plate mesoderm | 8.73e-13 | 203 |
internal thoracic artery | 8.81e-08 | 2 |
mesoderm | 6.01e-07 | 315 |
mesoderm-derived structure | 6.01e-07 | 315 |
presumptive mesoderm | 6.01e-07 | 315 |