FFCP PHASE1:Hg19::chr11:77185361..77185408,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5058 | |EntrezGene=entrezgene:5058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=8590 | |HGNC=HGNC:8590 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q13153 | |UniProt=uniprot:Q13153 | ||
|association_with_transcript=-253bp_to_NM_001128620,NM_002576,uc001oyg.3,uc001oyh.3_5end | |association_with_transcript=-253bp_to_NM_001128620,NM_002576,uc001oyg.3,uc001oyh.3_5end | ||
|cluster_id=chr11:77185361..77185408,- | |||
|description=CAGE_peak_7_at_PAK1_5end | |description=CAGE_peak_7_at_PAK1_5end | ||
|id=chr11:77185361..77185408,- | |id=chr11:77185361..77185408,- |
Revision as of 02:44, 24 July 2015
Short description: | p7@PAK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PAK1_5end |
Coexpression cluster: | NA |
Association with transcript: | -253bp_to_NM_001128620, NM_002576, uc001oyg.3, uc001oyh.3_5end |
EntrezGene: | 5058 |
HGNC: | 8590 |
UniProt: | Q13153 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@PAK1 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.82e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.82e-16 | 42 |
defensive cell | 2.08e-13 | 48 |
phagocyte | 2.08e-13 | 48 |
myeloid leukocyte | 3.19e-13 | 72 |
granulocyte monocyte progenitor cell | 1.10e-12 | 67 |
myeloid lineage restricted progenitor cell | 4.32e-12 | 66 |
monopoietic cell | 5.63e-11 | 59 |
monocyte | 5.63e-11 | 59 |
monoblast | 5.63e-11 | 59 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
nervous system | 2.75e-32 | 89 |
central nervous system | 1.07e-30 | 81 |
regional part of nervous system | 5.89e-29 | 53 |
regional part of brain | 5.89e-29 | 53 |
cerebral hemisphere | 1.93e-28 | 32 |
regional part of cerebral cortex | 2.35e-28 | 22 |
brain grey matter | 2.74e-28 | 34 |
gray matter | 2.74e-28 | 34 |
neural tube | 3.03e-28 | 56 |
neural rod | 3.03e-28 | 56 |
Showing 1 to 10 of 50 entries