FFCP PHASE1:Hg19::chr11:77185361..77185408,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5058 | |EntrezGene=entrezgene:5058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=8590 | |HGNC=HGNC:8590 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q13153 | |UniProt=uniprot:Q13153 | ||
|association_with_transcript=-253bp_to_NM_001128620,NM_002576,uc001oyg.3,uc001oyh.3_5end | |association_with_transcript=-253bp_to_NM_001128620,NM_002576,uc001oyg.3,uc001oyh.3_5end | ||
|cluster_id=chr11:77185361..77185408,- | |||
|description=CAGE_peak_7_at_PAK1_5end | |description=CAGE_peak_7_at_PAK1_5end | ||
|id=chr11:77185361..77185408,- | |id=chr11:77185361..77185408,- | ||
Revision as of 02:44, 24 July 2015
| Short description: | p7@PAK1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_PAK1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -253bp_to_NM_001128620, NM_002576, uc001oyg.3, uc001oyh.3_5end |
| EntrezGene: | 5058 |
| HGNC: | 8590 |
| UniProt: | Q13153 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p7@PAK1 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 1.82e-16 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.82e-16 | 42 |
| defensive cell | 2.08e-13 | 48 |
| phagocyte | 2.08e-13 | 48 |
| myeloid leukocyte | 3.19e-13 | 72 |
| granulocyte monocyte progenitor cell | 1.10e-12 | 67 |
| myeloid lineage restricted progenitor cell | 4.32e-12 | 66 |
| monopoietic cell | 5.63e-11 | 59 |
| monocyte | 5.63e-11 | 59 |
| monoblast | 5.63e-11 | 59 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 2.75e-32 | 89 |
| central nervous system | 1.07e-30 | 81 |
| regional part of nervous system | 5.89e-29 | 53 |
| regional part of brain | 5.89e-29 | 53 |
| cerebral hemisphere | 1.93e-28 | 32 |
| regional part of cerebral cortex | 2.35e-28 | 22 |
| brain grey matter | 2.74e-28 | 34 |
| gray matter | 2.74e-28 | 34 |
| neural tube | 3.03e-28 | 56 |
| neural rod | 3.03e-28 | 56 |
Showing 1 to 10 of 50 entries
