FFCP PHASE1:Hg19::chr12:109232143..109232171,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:109232143..109232171,- | |||
|description=CAGE_peak_at_chr12:109232143..109232171,- | |description=CAGE_peak_at_chr12:109232143..109232171,- | ||
|id=chr12:109232143..109232171,- | |id=chr12:109232143..109232171,- | ||
|ontology_enrichment_celltype=CL:0002057!5.49e-14!42;CL:0000860!9.29e-13!45;CL:0002371!2.98e-08!591;CL:0000144!1.73e-07!625;CL:0000048!1.85e-07!430;CL:0000723!3.25e-07!436;CL:0002320!3.46e-07!365;CL:0000034!4.21e-07!444;CL:0000557!6.22e-07!71 | |ontology_enrichment_celltype=CL:0002057!5.49e-14!42;CL:0000860!9.29e-13!45;CL:0002371!2.98e-08!591;CL:0000144!1.73e-07!625;CL:0000048!1.85e-07!430;CL:0000723!3.25e-07!436;CL:0002320!3.46e-07!365;CL:0000034!4.21e-07!444;CL:0000557!6.22e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.33e-15;33!CL:0002057;1.33e-15;33!CL:0000473;4.93e-12;39!CL:0000234;4.93e-12;39!CL:0000569;5.76e-12;4!CL:0000576;1.07e-10;48!CL:0002559;1.07e-09;5!CL:1000306;9.54e-08;4!CL:0002547;9.54e-08;4!CL:0001014;5.22e-07;2!CL:0001016;5.22e-07;2!CL:0002561;6.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.68e-18,42;CL:0002057,1.68e-18,42;CL:0000473,1.33e-15,48;CL:0000234,1.33e-15,48;CL:0002009,4.96e-14,61;CL:0000557,1.05e-13,67;CL:0002320,1.40e-12,361;CL:0000766,2.03e-12,72;CL:0000569,8.01e-12,4;CL:0000011,8.01e-12,4;CL:0002194,1.43e-11,59;CL:0000576,1.43e-11,59;CL:0000040,1.43e-11,59;CL:0000559,1.43e-11,59;CL:0000839,4.06e-11,66;CL:0000134,6.69e-11,354;CL:0002559,8.37e-10,5;CL:0000219,1.77e-09,386;CL:0000034,2.31e-09,441;CL:0000048,8.92e-09,427;CL:0000723,1.77e-08,433;CL:0000763,2.13e-08,108;CL:0000049,2.13e-08,108;CL:1000306,9.28e-08,4;CL:0002547,9.28e-08,4;CL:0002561,7.85e-07,2;CL:0001014,9.09e-07,2;CL:0001016,9.09e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.55e-14;42!CL:0000011;5.76e-12;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.06e-07!375;UBERON:0002204!3.58e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;1.07e-09;5!UBERON:0004797;9.54e-08;4!UBERON:0000415;9.54e-08;4!UBERON:0007240;9.54e-08;4!UBERON:0005742;9.54e-08;4!UBERON:0005734;9.54e-08;4!UBERON:0004664;9.54e-08;4!UBERON:0004663;9.54e-08;4!UBERON:0005933;6.93e-07;2!UBERON:0005942;6.93e-07;2!UBERON:0005932;6.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,2.74e-16,90;UBERON:0002371,2.29e-14,76;UBERON:0001474,3.55e-14,82;UBERON:0001434,5.47e-14,100;UBERON:0002384,6.87e-12,371;UBERON:0002405,1.02e-10,93;UBERON:0002390,6.80e-10,98;UBERON:0003061,6.80e-10,98;UBERON:0002073,8.37e-10,5;UBERON:0005086,8.37e-10,5;UBERON:0002193,1.75e-08,108;UBERON:0002204,5.06e-08,167;UBERON:0000415,9.28e-08,4;UBERON:0007240,9.28e-08,4;UBERON:0005742,9.28e-08,4;UBERON:0005734,9.28e-08,4;UBERON:0004664,9.28e-08,4;UBERON:0004663,9.28e-08,4;UBERON:0003081,1.80e-07,203;UBERON:0005933,7.85e-07,2;UBERON:0005942,7.85e-07,2;UBERON:0005932,7.85e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0,0,1.23766352960047,1.32558950291166,0,1.80808358407193,0,0,0,0.204000691244253,0,0.286235987131057,0,0.251085279189606,0,0,0,0.786728553697808,0,2.63187409637329,0,0.6024118375565,0,0,0,0,1.66198622559563,2.4065333696417,3.03815219002193,0,0,0,0.436194716338694,0,1.21292030593908,0.697287110717054,0.822335776043652,1.54853185447552,1.7261543539329,3.33008918487831,1.41889337933151,3.10271112662957,5.16387746867061,4.06279459783025,1.50593871634084,0.545812300115692,1.34834090667051,0.918251677112708,0.641858054152187,0.639337125799041,0.659702600373432,0.997318288108159,1.70489900213078,0.580418477257168,0,1.24564449799115,1.50749199154046,2.08593167368081,3.25783267057675,0,0.368277635987565,0.632924774881769,0.211255286311942,0,0,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,1.68152568894461,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,2.43317435151318,0.283604451492204,0.221729397462564,0.614843499851882,0.196468613246569,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0.258416759169329,0.71153252537342,0,0.805658634218294,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0.949265659568129,0.732806975721629,1.31780417436063,0,0,0.496971951695318,0.379891534993739,10.7251436458707,7.45775213946916,1.41867352879343,0.560677600142307,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0.23486899728753,0,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0.554128230968366,0,0,0,0.680593098960126,2.33206526395521,0.427114777637135,0.211931901159562,1.80054657650641,0.206105058476878,4.63752972082133,0.18611685633159,1.5189869901714,0.389748020644795,2.52433774244115,0.184099797284599,0,4.26011511019937,0.302256294682921,0.339121184620975,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,2.76269842704961,1.39310378409594,2.16563844500876,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.514703430895577,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,1.03664057770386,0.576479813667846,0.6312121671319,0.063497894292169,0.381988425558278,1.17217447210047,0,0.205654985406647,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.714889968290738,0,0,0,1.42156779497018,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.61642896765115,0.358121926479791,0,0,0.646882724578552,1.28343036279748,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0.500170521059677,1.35632511849868,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0.368738337083406,0.0868836144680828,0.195801157462741,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0.496215615637554,2.91577749247319,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0.925258162815933,1.24293207719189,0.492762936082855,0,0.464841513839837,0,0,0,0.114814448164607,0,0,0,0.231046011313244,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0.27470839445503,0.330037999682352,0,0.650060246036521,0,0,0.154048617114644,0.15350367472613,0.413509717453592,0.107420244868274,0,0.340906509664404,0.0890320356467374,0.330569830721956,0,1.40373983744043,0.10115778085555,0,8.81474571125792,0,0,0,0,0.74129687641568,0.572499546967965,0.744316738719335,0.632758849437452,0,0,0,0.95460974377781,1.56989728039846,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0.876901770507525,0,0,0.608731130888112,0.6196469961995,0.845086807596724,0.573645408816206,0.196498082026242,0.7133421029625,0.354761064070598,0.633322905892992,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0.852408440419239,0,0,0,0,0,0.333926115068718,0.659215496907038,0,0.796991953004279,0.552567831062295,0,0.306806047506464,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.538651809526579,0.455768223388005,0,0,0,0.638002319463839,0,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,1.45329133145522,0,0,0,0,0,0,0,0,0.520679215005393,0.293977192243133,0.957651272384428,0.17472666824203,0.343972064943233,0,0,0.0821154570532092,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0.85381197895741,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0.305994652908965,0.288950589901519,1.20084057741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| ||
|short_description=p@chr12:109232143..109232171,- | |short_description=p@chr12:109232143..109232171,- | ||
}} | }} |
Latest revision as of 04:41, 24 July 2015
Short description: | p@chr12:109232143..109232171, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109232143..109232171, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.68e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-18 | 42 |
defensive cell | 1.33e-15 | 48 |
phagocyte | 1.33e-15 | 48 |
macrophage dendritic cell progenitor | 4.96e-14 | 61 |
granulocyte monocyte progenitor cell | 1.05e-13 | 67 |
connective tissue cell | 1.40e-12 | 361 |
myeloid leukocyte | 2.03e-12 | 72 |
cardiac mesenchymal cell | 8.01e-12 | 4 |
migratory trunk neural crest cell | 8.01e-12 | 4 |
monopoietic cell | 1.43e-11 | 59 |
monocyte | 1.43e-11 | 59 |
monoblast | 1.43e-11 | 59 |
promonocyte | 1.43e-11 | 59 |
myeloid lineage restricted progenitor cell | 4.06e-11 | 66 |
mesenchymal cell | 6.69e-11 | 354 |
hair follicle cell | 8.37e-10 | 5 |
motile cell | 1.77e-09 | 386 |
stem cell | 2.31e-09 | 441 |
multi fate stem cell | 8.92e-09 | 427 |
somatic stem cell | 1.77e-08 | 433 |
myeloid cell | 2.13e-08 | 108 |
common myeloid progenitor | 2.13e-08 | 108 |
fibroblast of tunica adventitia of artery | 9.28e-08 | 4 |
fibroblast of the aortic adventitia | 9.28e-08 | 4 |
outer root sheath cell | 7.85e-07 | 2 |
CD1a-positive Langerhans cell | 9.09e-07 | 2 |
immature CD1a-positive Langerhans cell | 9.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 2.74e-16 | 90 |
bone marrow | 2.29e-14 | 76 |
bone element | 3.55e-14 | 82 |
skeletal system | 5.47e-14 | 100 |
connective tissue | 6.87e-12 | 371 |
immune system | 1.02e-10 | 93 |
hematopoietic system | 6.80e-10 | 98 |
blood island | 6.80e-10 | 98 |
hair follicle | 8.37e-10 | 5 |
hair follicle placode | 8.37e-10 | 5 |
hemolymphoid system | 1.75e-08 | 108 |
musculoskeletal system | 5.06e-08 | 167 |
artery wall | 9.28e-08 | 4 |
tunica adventitia of artery | 9.28e-08 | 4 |
adventitia | 9.28e-08 | 4 |
tunica adventitia of blood vessel | 9.28e-08 | 4 |
aorta tunica adventitia | 9.28e-08 | 4 |
aorta wall | 9.28e-08 | 4 |
lateral plate mesoderm | 1.80e-07 | 203 |
hair root sheath | 7.85e-07 | 2 |
hair outer root sheath | 7.85e-07 | 2 |
bulb of hair follicle | 7.85e-07 | 2 |