FFCP PHASE1:Hg19::chr12:111374348..111374361,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_ENST00000553177_5end | |association_with_transcript=-27bp_to_ENST00000553177_5end | ||
|cluster_id=chr12:111374348..111374361,+ | |||
|description=CAGE_peak_2_at_ENST00000553177_5end | |description=CAGE_peak_2_at_ENST00000553177_5end | ||
|id=chr12:111374348..111374361,+ | |id=chr12:111374348..111374361,+ | ||
|ontology_enrichment_celltype=CL:0002322!4.98e-23!5;CL:0000039!1.41e-15!7;CL:0000586!1.41e-15!7;CL:0000540!9.46e-08!6;CL:0000031!9.46e-08!6;CL:0000404!9.46e-08!6;CL:0000349!9.06e-07!3;CL:0002577!9.06e-07!3 | |ontology_enrichment_celltype=CL:0002322!4.98e-23!5;CL:0000039!1.41e-15!7;CL:0000586!1.41e-15!7;CL:0000540!9.46e-08!6;CL:0000031!9.46e-08!6;CL:0000404!9.46e-08!6;CL:0000349!9.06e-07!3;CL:0002577!9.06e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.56e-37;5!CL:0000540;1.49e-18;6!CL:0000404;1.49e-18;6!CL:0002321;1.26e-12;15!CL:0000148;4.70e-11;10!CL:0000147;4.76e-08;14!CL:0000039;1.33e-07;7!CL:0000586;1.33e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.30e-37,5;CL:0000540,1.37e-18,6;CL:0000031,1.37e-18,6;CL:0000404,1.37e-18,6;CL:0000047,4.23e-14,8;CL:0000148,4.95e-11,10;CL:0000541,4.95e-11,10;CL:0000147,4.94e-08,14;CL:0000039,1.47e-07,7;CL:0000586,1.47e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000031;1.49e-18;6!UBERON:0004874;7.24e-13;1 | |||
|ontology_enrichment_disease=DOID:3095!2.67e-11!22;DOID:2994!2.67e-11!22 | |||
|ontology_enrichment_disease_v019=DOID:6193;1.82e-13;1!DOID:0050619;2.18e-13;1!DOID:1357;2.18e-13;1!DOID:3350;2.28e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.82e-13,1;DOID:0050619,2.06e-13,1;DOID:1357,2.06e-13,1;DOID:3350,2.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001630!2.12e-10!2;UBERON:0005090!2.12e-10!2;UBERON:0000341!4.59e-10!2;UBERON:0003135!8.42e-07!11 | |ontology_enrichment_uberon=UBERON:0001630!2.12e-10!2;UBERON:0005090!2.12e-10!2;UBERON:0000341!4.59e-10!2;UBERON:0003135!8.42e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0005090;2.96e-24;2!UBERON:0001630;2.96e-24;2!UBERON:0001764;2.18e-13;1!UBERON:0001825;2.18e-13;1!UBERON:0002426;3.54e-13;1!UBERON:0003831;3.54e-13;1!UBERON:0003898;3.54e-13;1!UBERON:0004830;3.54e-13;1!UBERON:0003830;3.54e-13;1!UBERON:0005175;3.54e-13;1!UBERON:0001774;3.54e-13;1!UBERON:0001103;3.54e-13;1!UBERON:0000989;7.24e-13;1!UBERON:0001389;7.24e-13;1!UBERON:0000026;7.24e-13;1!UBERON:0008784;7.24e-13;1!UBERON:0006058;7.24e-13;1!UBERON:0008811;7.24e-13;1!UBERON:0003663;7.24e-13;1!UBERON:0004256;7.24e-13;1!UBERON:0004708;7.24e-13;1!UBERON:0002101;7.24e-13;1!UBERON:0004709;7.24e-13;1!UBERON:0002529;7.24e-13;1!UBERON:0010538;7.24e-13;1!UBERON:0003661;7.24e-13;1!UBERON:0010890;7.24e-13;1!UBERON:0002471;7.24e-13;1!UBERON:0001383;7.24e-13;1!UBERON:0010758;7.24e-13;1!UBERON:0010707;7.24e-13;1!UBERON:0000978;7.24e-13;1!UBERON:0002103;7.24e-13;1!UBERON:0001665;7.24e-13;1!UBERON:0003823;7.24e-13;1!UBERON:0000154;7.24e-13;1!UBERON:0010709;7.24e-13;1!UBERON:0003135;4.23e-10;11!UBERON:0000922;8.45e-08;49!UBERON:0001134;4.19e-07;16!UBERON:0002036;4.19e-07;16!UBERON:0000341;4.55e-07;2!UBERON:0000473;9.38e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,2.64e-24,2;UBERON:0001630,2.64e-24,2;UBERON:0001764,2.06e-13,1;UBERON:0001825,2.06e-13,1;UBERON:0002426,3.76e-13,1;UBERON:0003831,3.76e-13,1;UBERON:0003898,3.76e-13,1;UBERON:0004830,3.76e-13,1;UBERON:0003830,3.76e-13,1;UBERON:0005175,3.76e-13,1;UBERON:0001774,3.76e-13,1;UBERON:0001103,3.76e-13,1;UBERON:0010084,3.76e-13,1;UBERON:0000989,4.77e-13,1;UBERON:0008811,4.77e-13,1;UBERON:0006258,4.77e-13,1;UBERON:0005876,4.77e-13,1;UBERON:0004874,4.77e-13,1;UBERON:0005418,6.06e-13,1;UBERON:0001389,6.06e-13,1;UBERON:0000026,6.06e-13,1;UBERON:0008784,6.06e-13,1;UBERON:0006058,6.06e-13,1;UBERON:0003663,6.06e-13,1;UBERON:0004256,6.06e-13,1;UBERON:0004708,6.06e-13,1;UBERON:0002101,6.06e-13,1;UBERON:0004709,6.06e-13,1;UBERON:0002529,6.06e-13,1;UBERON:0010538,6.06e-13,1;UBERON:0003661,6.06e-13,1;UBERON:0010890,6.06e-13,1;UBERON:0002471,6.06e-13,1;UBERON:0001383,6.06e-13,1;UBERON:0004357,6.06e-13,1;UBERON:0004347,6.06e-13,1;UBERON:0005420,6.06e-13,1;UBERON:0005732,6.06e-13,1;UBERON:0010758,6.06e-13,1;UBERON:0010707,6.06e-13,1;UBERON:0000978,6.06e-13,1;UBERON:0002103,6.06e-13,1;UBERON:0001665,6.06e-13,1;UBERON:0003823,6.06e-13,1;UBERON:0000154,6.06e-13,1;UBERON:0010709,6.06e-13,1;UBERON:0005733,6.06e-13,1;UBERON:0005730,6.06e-13,1;UBERON:0003135,4.16e-10,11;UBERON:0000341,5.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58565817968474,0.927708378250397,1.62671520017326,1.14027160516907,2.52320850875628,4.01475094983413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,6.1914971689782,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,2.89355667237035,3.98864366131978,7.06248574649615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.55456879125679,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94228651156368,1.95059333026869,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,1.52983244612973,0.26721740526556,2.20547758883628,0,0,0,0,0,1.0661699095049,0.476128862927481,0,0,0,0.0636471582781649,0,0.653150243690884,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58565817968474,0.927708378250397,1.62671520017326,1.14027160516907,2.52320850875628,4.01475094983413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,6.1914971689782,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,2.89355667237035,3.98864366131978,7.06248574649615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.55456879125679,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94228651156368,1.95059333026869,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,1.52983244612973,0.26721740526556,2.20547758883628,0,0,0,0,0,1.0661699095049,0.476128862927481,0,0,0,0.0636471582781649,0,0.653150243690884,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p2@ENST00000553177 | |short_description=p2@ENST00000553177 | ||
}} | }} |
Latest revision as of 04:58, 24 July 2015
Short description: | p2@ENST00000553177 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000553177_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000553177_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.30e-37 | 5 |
neuron | 1.37e-18 | 6 |
neuroblast | 1.37e-18 | 6 |
electrically signaling cell | 1.37e-18 | 6 |
neuronal stem cell | 4.23e-14 | 8 |
melanocyte | 4.95e-11 | 10 |
melanoblast | 4.95e-11 | 10 |
pigment cell | 4.94e-08 | 14 |
germ line cell | 1.47e-07 | 7 |
germ cell | 1.47e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.82e-13 | 1 |
paranasal sinus cancer | 2.06e-13 | 1 |
maxillary sinus cancer | 2.06e-13 | 1 |
mesenchymal cell neoplasm | 2.28e-07 | 2 |