FFCP PHASE1:Hg19::chr12:111594458..111594459,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:111594458..111594459,+ | |||
|coexpression_cluster_id=C1160 | |||
|description=CAGE_peak_at_chr12:111594458..111594459,+ | |||
|id=chr12:111594458..111594459,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.21e-11!42;CL:0000860!1.48e-09!45;CL:0002009!2.47e-07!65;CL:0000839!2.58e-07!70;CL:0000557!3.21e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.30e-14;33!CL:0002057;5.30e-14;33!CL:0000473;4.72e-12;39!CL:0000234;4.72e-12;39!CL:0000576;1.41e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.48e-15,48;CL:0000234,1.48e-15,48;CL:0000860,2.37e-15,42;CL:0002057,2.37e-15,42;CL:0002009,6.02e-12,61;CL:0000557,2.60e-11,67;CL:0002194,7.37e-11,59;CL:0000576,7.37e-11,59;CL:0000040,7.37e-11,59;CL:0000559,7.37e-11,59;CL:0000839,1.28e-10,66;CL:0000766,8.84e-10,72;CL:0000763,1.01e-08,108;CL:0000049,1.01e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.14e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.82e-13!115;UBERON:0001049!3.56e-10!57;UBERON:0005068!3.56e-10!57;UBERON:0006241!3.56e-10!57;UBERON:0007135!3.56e-10!57;UBERON:0003080!8.60e-10!42;UBERON:0002780!9.36e-10!41;UBERON:0001890!9.36e-10!41;UBERON:0006240!9.36e-10!41;UBERON:0002616!3.13e-09!59;UBERON:0002020!6.71e-09!34;UBERON:0003528!6.71e-09!34;UBERON:0002791!5.56e-08!33;UBERON:0001893!6.17e-08!34;UBERON:0000955!7.18e-08!69;UBERON:0006238!7.18e-08!69;UBERON:0001869!1.10e-07!32;UBERON:0002619!1.51e-07!22;UBERON:0001017!1.66e-07!82;UBERON:0002346!5.67e-07!90;UBERON:0000073!5.86e-07!94;UBERON:0001016!5.86e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.85e-08;34!UBERON:0002020;4.85e-08;34!UBERON:0002619;7.14e-08;22!UBERON:0002791;1.71e-07;32!UBERON:0002780;1.73e-07;41!UBERON:0001890;1.73e-07;41!UBERON:0001869;4.42e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.00e-12,114;UBERON:0002371,1.21e-10,76;UBERON:0000073,6.12e-10,53;UBERON:0002616,6.12e-10,53;UBERON:0001049,9.03e-10,56;UBERON:0005068,9.03e-10,56;UBERON:0006241,9.03e-10,56;UBERON:0007135,9.03e-10,56;UBERON:0003528,1.01e-09,34;UBERON:0002020,1.01e-09,34;UBERON:0002780,1.18e-09,41;UBERON:0001890,1.18e-09,41;UBERON:0003080,1.18e-09,41;UBERON:0006240,1.18e-09,41;UBERON:0001474,5.89e-09,82;UBERON:0002791,2.24e-08,32;UBERON:0002619,2.84e-08,22;UBERON:0004765,2.95e-08,90;UBERON:0001434,6.30e-08,100;UBERON:0002346,1.07e-07,86;UBERON:0001869,1.26e-07,32;UBERON:0003075,1.55e-07,82;UBERON:0007284,1.55e-07,82;UBERON:0002405,1.58e-07,93;UBERON:0001893,1.62e-07,34;UBERON:0000955,3.63e-07,68;UBERON:0006238,3.63e-07,68;UBERON:0001950,8.31e-07,20 | |||
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| |||
|short_description=p@chr12:111594458..111594459,+ | |||
}} |
Latest revision as of 04:59, 24 July 2015
Short description: | p@chr12:111594458..111594459, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:111594458..111594459, + |
Coexpression cluster: | C1160_skeletal_acute_Monocytederived_hippocampus_medulla_optic_Aortic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.48e-15 | 48 |
phagocyte | 1.48e-15 | 48 |
classical monocyte | 2.37e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.37e-15 | 42 |
macrophage dendritic cell progenitor | 6.02e-12 | 61 |
granulocyte monocyte progenitor cell | 2.60e-11 | 67 |
monopoietic cell | 7.37e-11 | 59 |
monocyte | 7.37e-11 | 59 |
monoblast | 7.37e-11 | 59 |
promonocyte | 7.37e-11 | 59 |
myeloid lineage restricted progenitor cell | 1.28e-10 | 66 |
myeloid leukocyte | 8.84e-10 | 72 |
myeloid cell | 1.01e-08 | 108 |
common myeloid progenitor | 1.01e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.00e-12 | 114 |
bone marrow | 1.21e-10 | 76 |
regional part of nervous system | 6.12e-10 | 53 |
regional part of brain | 6.12e-10 | 53 |
neural tube | 9.03e-10 | 56 |
neural rod | 9.03e-10 | 56 |
future spinal cord | 9.03e-10 | 56 |
neural keel | 9.03e-10 | 56 |
brain grey matter | 1.01e-09 | 34 |
gray matter | 1.01e-09 | 34 |
regional part of forebrain | 1.18e-09 | 41 |
forebrain | 1.18e-09 | 41 |
anterior neural tube | 1.18e-09 | 41 |
future forebrain | 1.18e-09 | 41 |
bone element | 5.89e-09 | 82 |
regional part of telencephalon | 2.24e-08 | 32 |
regional part of cerebral cortex | 2.84e-08 | 22 |
skeletal element | 2.95e-08 | 90 |
skeletal system | 6.30e-08 | 100 |
neurectoderm | 1.07e-07 | 86 |
cerebral hemisphere | 1.26e-07 | 32 |
neural plate | 1.55e-07 | 82 |
presumptive neural plate | 1.55e-07 | 82 |
immune system | 1.58e-07 | 93 |
telencephalon | 1.62e-07 | 34 |
brain | 3.63e-07 | 68 |
future brain | 3.63e-07 | 68 |
neocortex | 8.31e-07 | 20 |