FFCP PHASE1:Hg19::chr12:118124954..118124964,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:118124954..118124964,-
|short_description=p@chr12:118124954..118124964,-
|description=CAGE_peak_at_chr12:118124954..118124964,-
|association_with_transcri...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:118124954..118124964,- | |||
|description=CAGE_peak_at_chr12:118124954..118124964,- | |||
|id=chr12:118124954..118124964,- | |||
|ontology_enrichment_celltype=CL:0002139!2.49e-28!24;CL:0002078!7.91e-25!44;CL:0000115!2.24e-23!35;CL:0000071!1.22e-21!18;CL:0002546!1.22e-21!18;CL:1000413!5.11e-16!9;CL:1000449!9.87e-14!16;CL:0000213!1.69e-12!57;CL:0000215!1.69e-12!57;CL:1000497!5.34e-12!18;CL:0002518!5.34e-12!18;CL:1000507!1.93e-11!12;CL:1000494!1.93e-11!12;CL:0002681!1.50e-10!13;CL:0002584!1.50e-10!13;CL:0002620!1.95e-10!23;CL:0000239!5.94e-10!3;CL:1000615!5.94e-10!3;CL:0002306!5.94e-10!3;CL:0000066!6.92e-09!254;CL:0002544!1.19e-08!6;CL:0005020!3.14e-08!6;CL:0002138!3.14e-08!6;CL:0005022!3.14e-08!6;CL:0002543!7.00e-08!6;CL:0000222!2.69e-07!119;CL:0002545!3.00e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000071;2.11e-24;18!CL:1000413;4.66e-22;9!CL:0000115;1.03e-19;36!CL:0002544;5.26e-19;6!CL:0002139;3.01e-18;24!CL:0000346;1.04e-17;3!CL:1000428;1.04e-17;3!CL:0002078;1.17e-12;45!CL:0002559;5.16e-11;5!CL:0000213;5.90e-11;58!CL:0000215;5.90e-11;58!CL:0002188;8.71e-11;5!CL:0002681;6.28e-10;12!CL:0002584;6.28e-10;12!CL:1000449;4.77e-08;15!CL:1000746;5.86e-08;7!CL:1000612;5.86e-08;7!CL:0002545;1.87e-07;2!CL:1000497;3.69e-07;17!CL:0002518;3.69e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.65e-24,18;CL:0002546,1.65e-24,18;CL:1000413,3.54e-22,9;CL:0002078,2.63e-21,45;CL:0000115,3.60e-21,36;CL:0002544,3.20e-19,6;CL:0002139,2.51e-18,24;CL:0000346,8.40e-18,3;CL:1000428,8.40e-18,3;CL:0000213,7.45e-13,58;CL:0000215,7.45e-13,58;CL:0002559,4.55e-11,5;CL:0002188,9.62e-11,5;CL:0002681,6.68e-10,12;CL:0002584,6.68e-10,12;CL:1000449,5.00e-08,15;CL:1000746,6.29e-08,7;CL:1000612,6.29e-08,7;CL:0002545,1.54e-07,2;CL:0000222,2.77e-07,121;CL:1000497,3.85e-07,17;CL:0002518,3.85e-07,17;CL:0000076,8.95e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;2.11e-24;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;1.23e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.36e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.22e-21!18;UBERON:0004638!1.22e-21!18;UBERON:0004852!1.22e-21!18;UBERON:0000487!3.63e-17!22;UBERON:0003915!5.11e-16!9;UBERON:0004700!5.11e-16!9;UBERON:0001917!5.11e-16!9;UBERON:0006914!9.34e-15!25;UBERON:0004211!9.87e-14!16;UBERON:0001285!9.87e-14!16;UBERON:0007684!9.87e-14!16;UBERON:0003220!9.87e-14!16;UBERON:0004208!9.87e-14!16;UBERON:0006555!8.17e-13!17;UBERON:0005103!8.17e-13!17;UBERON:0000083!8.17e-13!17;UBERON:0009201!8.17e-13!17;UBERON:0004819!8.17e-13!17;UBERON:0006553!8.17e-13!17;UBERON:0003074!8.17e-13!17;UBERON:0003060!8.17e-13!17;UBERON:0000080!5.34e-12!18;UBERON:0002120!5.34e-12!18;UBERON:0004875!5.34e-12!18;UBERON:0005721!5.34e-12!18;UBERON:0005754!5.34e-12!18;UBERON:0007297!5.34e-12!18;UBERON:0009773!1.93e-11!12;UBERON:0001231!1.93e-11!12;UBERON:0004810!1.93e-11!12;UBERON:0003914!4.37e-11!118;UBERON:0002049!7.95e-11!79;UBERON:0007798!7.95e-11!79;UBERON:0004876!1.29e-10!20;UBERON:0000055!1.38e-10!69;UBERON:0001225!1.50e-10!13;UBERON:0008987!1.50e-10!13;UBERON:0003887!5.07e-10!21;UBERON:0006853!5.94e-10!3;UBERON:0007685!5.94e-10!3;UBERON:0004134!5.94e-10!3;UBERON:0001851!2.34e-08!16;UBERON:0002097!7.85e-08!40;UBERON:0000353!8.47e-08!17;UBERON:0000058!9.46e-08!26;UBERON:0001981!1.85e-07!60;UBERON:0007500!1.85e-07!60;UBERON:0004537!1.85e-07!60;UBERON:0006965!1.85e-07!60;UBERON:0002113!2.13e-07!27;UBERON:0003918!2.13e-07!27;UBERON:0005095!2.13e-07!27;UBERON:0007687!2.13e-07!27;UBERON:0005800!3.00e-07!2;UBERON:0001515!3.00e-07!2;UBERON:0004111!4.08e-07!241;UBERON:0000025!4.53e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.11e-24;18!UBERON:0001986;2.11e-24;18!UBERON:0004852;2.11e-24;18!UBERON:0003915;4.66e-22;9!UBERON:0004700;4.66e-22;9!UBERON:0001917;4.66e-22;9!UBERON:0000487;6.29e-20;22!UBERON:0000412;1.04e-17;3!UBERON:0001992;1.04e-17;3!UBERON:0006914;1.65e-17;25!UBERON:0000490;2.87e-13;33!UBERON:0002073;5.16e-11;5!UBERON:0001225;6.28e-10;12!UBERON:0008987;6.28e-10;12!UBERON:0001851;4.77e-08;15!UBERON:0006555;4.77e-08;15!UBERON:0000353;4.77e-08;15!UBERON:0004819;4.77e-08;15!UBERON:0001285;4.77e-08;15!UBERON:0007684;4.77e-08;15!UBERON:0000074;5.86e-08;7!UBERON:0001229;5.86e-08;7!UBERON:0005800;1.87e-07;2!UBERON:0001515;1.87e-07;2!UBERON:0007500;3.53e-07;56!UBERON:0001981;3.53e-07;56!UBERON:0004537;3.53e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.65e-24,18;UBERON:0001986,1.65e-24,18;UBERON:0004852,1.65e-24,18;UBERON:0003915,3.54e-22,9;UBERON:0004700,3.54e-22,9;UBERON:0001917,3.54e-22,9;UBERON:0000487,5.15e-20,22;UBERON:0000412,8.40e-18,3;UBERON:0001992,8.40e-18,3;UBERON:0006914,1.39e-17,25;UBERON:0002073,4.55e-11,5;UBERON:0005086,4.55e-11,5;UBERON:0001225,6.68e-10,12;UBERON:0008987,6.68e-10,12;UBERON:0003914,2.18e-09,117;UBERON:0001851,5.00e-08,15;UBERON:0004211,5.00e-08,15;UBERON:0009773,5.00e-08,15;UBERON:0000353,5.00e-08,15;UBERON:0001231,5.00e-08,15;UBERON:0001285,5.00e-08,15;UBERON:0007684,5.00e-08,15;UBERON:0004208,5.00e-08,15;UBERON:0010532,6.29e-08,7;UBERON:0000074,6.29e-08,7;UBERON:0001229,6.29e-08,7;UBERON:0001230,6.29e-08,7;UBERON:0003220,6.29e-08,7;UBERON:0005749,6.29e-08,7;UBERON:0004199,6.29e-08,7;UBERON:0004209,6.29e-08,7;UBERON:0004198,6.29e-08,7;UBERON:0006555,1.48e-07,16;UBERON:0004819,1.48e-07,16;UBERON:0005800,1.54e-07,2;UBERON:0001515,1.54e-07,2;UBERON:0007500,2.93e-07,59;UBERON:0001981,2.93e-07,59;UBERON:0004537,2.93e-07,59;UBERON:0006965,2.93e-07,59;UBERON:0005103,4.84e-07,8;UBERON:0000083,4.84e-07,8;UBERON:0009201,4.84e-07,8;UBERON:0006553,4.84e-07,8;UBERON:0003074,4.84e-07,8;UBERON:0003060,4.84e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0,0,0,0,1.19257444420023,0,1.73570250803797,0,0.419499436209906,0.550236083880135,1.04497483268405,0,0.71153252537342,0,0,2.28081631715554,0,0.735326160691737,1.62028389576352,0.17859945656816,0,0.112611480483322,0,2.84779697870439,0.916008719652036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0,0,0.300091096084402,0.103052529238439,1.03056216018252,0,0.506328996723799,0,0.504867548488229,0,0,2.84007674013291,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,4.5026865673502,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.866198686566443,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.231046011313244,0.784349769176855,0,0.527758144464379,1.13733384070897,1.19065593693561,0.647747748306418,0,0,0,0.509752546090077,0.831076008928724,3.80587083027703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,2.10998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0.313808538937,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23580644277392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889851215136553,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0,0,0,0,1.19257444420023,0,1.73570250803797,0,0.419499436209906,0.550236083880135,1.04497483268405,0,0.71153252537342,0,0,2.28081631715554,0,0.735326160691737,1.62028389576352,0.17859945656816,0,0.112611480483322,0,2.84779697870439,0.916008719652036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0,0,0.300091096084402,0.103052529238439,1.03056216018252,0,0.506328996723799,0,0.504867548488229,0,0,2.84007674013291,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,4.5026865673502,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.866198686566443,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.231046011313244,0.784349769176855,0,0.527758144464379,1.13733384070897,1.19065593693561,0.647747748306418,0,0,0,0.509752546090077,0.831076008928724,3.80587083027703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,2.10998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0.313808538937,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23580644277392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889851215136553,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:118124954..118124964,- | |||
}} | }} |
Latest revision as of 05:29, 24 July 2015
Short description: | p@chr12:118124954..118124964, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:118124954..118124964, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.65e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.65e-24 | 18 |
endothelial cell of artery | 3.54e-22 | 9 |
meso-epithelial cell | 2.63e-21 | 45 |
endothelial cell | 3.60e-21 | 36 |
aortic endothelial cell | 3.20e-19 | 6 |
endothelial cell of vascular tree | 2.51e-18 | 24 |
hair follicle dermal papilla cell | 8.40e-18 | 3 |
stem cell of epidermis | 8.40e-18 | 3 |
lining cell | 7.45e-13 | 58 |
barrier cell | 7.45e-13 | 58 |
hair follicle cell | 4.55e-11 | 5 |
glomerular endothelial cell | 9.62e-11 | 5 |
kidney cortical cell | 6.68e-10 | 12 |
renal cortical epithelial cell | 6.68e-10 | 12 |
epithelial cell of nephron | 5.00e-08 | 15 |
glomerular cell | 6.29e-08 | 7 |
kidney corpuscule cell | 6.29e-08 | 7 |
thoracic aorta endothelial cell | 1.54e-07 | 2 |
mesodermal cell | 2.77e-07 | 121 |
kidney cell | 3.85e-07 | 17 |
kidney epithelial cell | 3.85e-07 | 17 |
squamous epithelial cell | 8.95e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.36e-07 | 2 |