FFCP PHASE1:Hg19::chr12:120142354..120142372,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:120142354..120142372,- | |||
|description=CAGE_peak_at_chr12:120142354..120142372,- | |description=CAGE_peak_at_chr12:120142354..120142372,- | ||
|id=chr12:120142354..120142372,- | |id=chr12:120142354..120142372,- | ||
|ontology_enrichment_celltype=CL:0002078!2.51e-19!44;CL:0002139!4.57e-16!24;CL:0000115!7.72e-16!35;CL:0005020!1.26e-11!6;CL:0002138!1.26e-11!6;CL:0005022!1.26e-11!6;CL:1000497!4.36e-10!18;CL:0002518!4.36e-10!18;CL:1000507!1.46e-09!12;CL:1000494!1.46e-09!12;CL:0002144!1.90e-09!3;CL:1000449!3.95e-09!16;CL:0002681!6.67e-09!13;CL:0002584!6.67e-09!13;CL:0000239!6.98e-09!3;CL:1000615!6.98e-09!3;CL:0002306!6.98e-09!3;CL:0000222!8.41e-09!119;CL:0002552!2.11e-08!5;CL:0000071!3.94e-08!18;CL:0002546!3.94e-08!18;CL:0000213!4.04e-08!57;CL:0000215!4.04e-08!57 | |ontology_enrichment_celltype=CL:0002078!2.51e-19!44;CL:0002139!4.57e-16!24;CL:0000115!7.72e-16!35;CL:0005020!1.26e-11!6;CL:0002138!1.26e-11!6;CL:0005022!1.26e-11!6;CL:1000497!4.36e-10!18;CL:0002518!4.36e-10!18;CL:1000507!1.46e-09!12;CL:1000494!1.46e-09!12;CL:0002144!1.90e-09!3;CL:1000449!3.95e-09!16;CL:0002681!6.67e-09!13;CL:0002584!6.67e-09!13;CL:0000239!6.98e-09!3;CL:1000615!6.98e-09!3;CL:0002306!6.98e-09!3;CL:0000222!8.41e-09!119;CL:0002552!2.11e-08!5;CL:0000071!3.94e-08!18;CL:0002546!3.94e-08!18;CL:0000213!4.04e-08!57;CL:0000215!4.04e-08!57 | ||
|ontology_enrichment_celltype_v019=CL:0002144;2.53e-31;3!CL:0002138;1.62e-26;6!CL:0002139;8.88e-20;24!CL:0002078;1.58e-19;45!CL:0000115;1.57e-15;36!CL:0000239;5.05e-14;3!CL:1000615;5.05e-14;3!CL:0002306;5.05e-14;3!CL:0000228;3.81e-11;1!CL:0002372;3.81e-11;1!CL:0000213;1.31e-09;58!CL:0000215;1.31e-09;58!CL:0002681;4.80e-08;12!CL:0002584;4.80e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,2.66e-31,3;CL:0005020,1.09e-26,6;CL:0002138,1.09e-26,6;CL:0005022,1.09e-26,6;CL:0002078,3.53e-25,45;CL:0000115,2.16e-21,36;CL:0002139,7.60e-20,24;CL:0000239,5.77e-14,3;CL:1000615,5.77e-14,3;CL:0002306,5.77e-14,3;CL:0000213,7.77e-13,58;CL:0000215,7.77e-13,58;CL:0000228,3.63e-11,1;CL:0002372,3.63e-11,1;CL:0000222,4.98e-10,121;CL:0002681,5.04e-08,12;CL:0002584,5.04e-08,12 | |||
|ontology_enrichment_development_v019=CL:0005022;1.62e-26;6!UBERON:0004872;8.73e-07;7 | |||
|ontology_enrichment_disease=DOID:17!2.67e-08!5;DOID:450!2.67e-08!5;DOID:66!2.67e-08!5;DOID:423!2.67e-08!5;DOID:0080000!2.67e-08!5;DOID:11722!2.67e-08!5 | |ontology_enrichment_disease=DOID:17!2.67e-08!5;DOID:450!2.67e-08!5;DOID:66!2.67e-08!5;DOID:423!2.67e-08!5;DOID:0080000!2.67e-08!5;DOID:11722!2.67e-08!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0010523;2.53e-31;3!UBERON:0001915;2.53e-31;3!UBERON:0001982;2.53e-31;3!UBERON:0001473;5.65e-20;8!UBERON:0004536;5.65e-20;8!UBERON:0006558;5.65e-20;8!UBERON:0002465;4.86e-16;10!UBERON:0002106;1.11e-14;3!UBERON:0006853;5.05e-14;3!UBERON:0007685;5.05e-14;3!UBERON:0004134;5.05e-14;3!UBERON:0002405;6.13e-13;27!UBERON:0002134;3.81e-11;1!UBERON:0005208;3.81e-11;1!UBERON:0004145;3.81e-11;1!UBERON:0005946;3.81e-11;1!UBERON:0005965;3.81e-11;1!UBERON:0002078;3.81e-11;1!UBERON:0000353;7.99e-11;15!UBERON:0004177;3.60e-09;5!UBERON:0005057;3.60e-09;5!UBERON:0001225;4.80e-08;12!UBERON:0008987;4.80e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.66e-31,3;UBERON:0001915,2.66e-31,3;UBERON:0001982,2.66e-31,3;UBERON:0001473,4.20e-20,8;UBERON:0004536,4.20e-20,8;UBERON:0006558,4.20e-20,8;UBERON:0002465,3.84e-16,10;UBERON:0002106,9.39e-15,3;UBERON:0004854,9.39e-15,3;UBERON:0009034,9.39e-15,3;UBERON:0002095,9.39e-15,3;UBERON:0004782,9.39e-15,3;UBERON:0003281,9.39e-15,3;UBERON:0009664,9.39e-15,3;UBERON:0002296,9.39e-15,3;UBERON:0005602,9.39e-15,3;UBERON:0001179,9.39e-15,3;UBERON:0006293,9.39e-15,3;UBERON:0006853,5.77e-14,3;UBERON:0007685,5.77e-14,3;UBERON:0004134,5.77e-14,3;UBERON:0002134,3.28e-11,1;UBERON:0005208,3.28e-11,1;UBERON:0005946,3.28e-11,1;UBERON:0005965,3.28e-11,1;UBERON:0002078,3.28e-11,1;UBERON:0000353,8.52e-11,15;UBERON:0000055,1.03e-10,68;UBERON:0002049,3.48e-09,78;UBERON:0007798,3.48e-09,78;UBERON:0003887,2.60e-08,12;UBERON:0001225,5.04e-08,12;UBERON:0008987,5.04e-08,12;UBERON:0004177,8.13e-07,7;UBERON:0005057,8.13e-07,7 | |||
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|short_description=p@chr12:120142354..120142372,- | |short_description=p@chr12:120142354..120142372,- | ||
}} | }} |
Latest revision as of 05:40, 24 July 2015
Short description: | p@chr12:120142354..120142372, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:120142354..120142372, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 2.66e-31 | 3 |
lymphangioblast | 1.09e-26 | 6 |
endothelial cell of lymphatic vessel | 1.09e-26 | 6 |
vascular lymphangioblast | 1.09e-26 | 6 |
meso-epithelial cell | 3.53e-25 | 45 |
endothelial cell | 2.16e-21 | 36 |
endothelial cell of vascular tree | 7.60e-20 | 24 |
brush border epithelial cell | 5.77e-14 | 3 |
kidney cortex tubule cell | 5.77e-14 | 3 |
epithelial cell of proximal tubule | 5.77e-14 | 3 |
lining cell | 7.77e-13 | 58 |
barrier cell | 7.77e-13 | 58 |
multinucleate cell | 3.63e-11 | 1 |
myotube | 3.63e-11 | 1 |
mesodermal cell | 4.98e-10 | 121 |
kidney cortical cell | 5.04e-08 | 12 |
renal cortical epithelial cell | 5.04e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 2.66e-31 | 3 |
endothelium of capillary | 2.66e-31 | 3 |
capillary | 2.66e-31 | 3 |
lymphatic vessel | 4.20e-20 | 8 |
lymph vasculature | 4.20e-20 | 8 |
lymphatic part of lymphoid system | 4.20e-20 | 8 |
lymphoid system | 3.84e-16 | 10 |
spleen | 9.39e-15 | 3 |
gastrointestinal system mesentery | 9.39e-15 | 3 |
stomach region | 9.39e-15 | 3 |
mesentery | 9.39e-15 | 3 |
gastrointestinal system serosa | 9.39e-15 | 3 |
mesentery of stomach | 9.39e-15 | 3 |
gut mesentery | 9.39e-15 | 3 |
dorsal mesentery | 9.39e-15 | 3 |
dorsal mesogastrium | 9.39e-15 | 3 |
peritoneal cavity | 9.39e-15 | 3 |
spleen primordium | 9.39e-15 | 3 |
renal cortex tubule | 5.77e-14 | 3 |
region of nephron tubule | 5.77e-14 | 3 |
proximal tubule | 5.77e-14 | 3 |
tricuspid valve | 3.28e-11 | 1 |
right atrium valve | 3.28e-11 | 1 |
outflow tract of atrium | 3.28e-11 | 1 |
outflow part of right atrium | 3.28e-11 | 1 |
right cardiac atrium | 3.28e-11 | 1 |
parenchyma | 8.52e-11 | 15 |
vessel | 1.03e-10 | 68 |
vasculature | 3.48e-09 | 78 |
vascular system | 3.48e-09 | 78 |
intraembryonic coelom | 2.60e-08 | 12 |
cortex of kidney | 5.04e-08 | 12 |
renal parenchyma | 5.04e-08 | 12 |
hemopoietic organ | 8.13e-07 | 7 |
immune organ | 8.13e-07 | 7 |