FFCP PHASE1:Hg19::chr12:18794697..18794700,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:18794697..18794700,+ | |||
|description=CAGE_peak_at_chr12:18794697..18794700,+ | |description=CAGE_peak_at_chr12:18794697..18794700,+ | ||
|id=chr12:18794697..18794700,+ | |id=chr12:18794697..18794700,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:1799;8.02e-18;1!DOID:10165;8.02e-18;1!DOID:1798;8.02e-18;1!DOID:3493;1.38e-09;2 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0006947;2.43e-50;3!UBERON:0004054;2.43e-50;3!UBERON:0005904;5.57e-38;4!UBERON:0003135;2.25e-24;11!UBERON:0001000;4.08e-18;1!UBERON:0000998;4.08e-18;1!UBERON:0006868;4.08e-18;1!UBERON:0005352;4.08e-18;1!UBERON:0001301;8.02e-18;1!UBERON:0000989;1.44e-17;1!UBERON:0000941;1.44e-17;1!UBERON:0001785;1.44e-17;1!UBERON:0002464;1.44e-17;1!UBERON:0004904;1.44e-17;1!UBERON:0008811;1.44e-17;1!UBERON:0001021;1.44e-17;1!UBERON:0000058;1.20e-15;10!UBERON:0003101;2.20e-12;22!UBERON:0000079;2.20e-12;22!UBERON:0003714;1.86e-09;2!UBERON:0005162;1.86e-09;2!UBERON:0000122;1.86e-09;2!UBERON:0004175;9.18e-08;21 | |ontology_enrichment_development_v019=UBERON:0007297;4.29e-34;2!UBERON:0005754;4.08e-18;1!UBERON:0005425;1.44e-17;1!UBERON:0004874;1.44e-17;1 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;8.02e-18;1!DOID:10165;8.02e-18;1!DOID:1798;8.02e-18;1!DOID:3493;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.03e-17,1;DOID:10165,1.03e-17,1;DOID:1798,1.03e-17,1;DOID:3493,1.44e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0006947!8.41e-10!3;UBERON:0004054!8.41e-10!3;UBERON:0003135!6.25e-09!11;UBERON:0007023!1.71e-08!115;UBERON:0005904!2.04e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.43e-50;3!UBERON:0004054;2.43e-50;3!UBERON:0005904;5.57e-38;4!UBERON:0003135;2.25e-24;11!UBERON:0001000;4.08e-18;1!UBERON:0000998;4.08e-18;1!UBERON:0006868;4.08e-18;1!UBERON:0005352;4.08e-18;1!UBERON:0001301;8.02e-18;1!UBERON:0000989;1.44e-17;1!UBERON:0000941;1.44e-17;1!UBERON:0001785;1.44e-17;1!UBERON:0002464;1.44e-17;1!UBERON:0004904;1.44e-17;1!UBERON:0008811;1.44e-17;1!UBERON:0001021;1.44e-17;1!UBERON:0000058;1.20e-15;10!UBERON:0003101;2.20e-12;22!UBERON:0000079;2.20e-12;22!UBERON:0003714;1.86e-09;2!UBERON:0005162;1.86e-09;2!UBERON:0000122;1.86e-09;2!UBERON:0004175;9.18e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.23e-50,3;UBERON:0004054,2.23e-50,3;UBERON:0005904,5.23e-38,4;UBERON:0003135,2.05e-24,11;UBERON:0000998,3.75e-18,1;UBERON:0006868,3.75e-18,1;UBERON:0001000,4.44e-18,1;UBERON:0005352,4.44e-18,1;UBERON:0001301,7.37e-18,1;UBERON:0000989,1.22e-17,1;UBERON:0008811,1.22e-17,1;UBERON:0006258,1.22e-17,1;UBERON:0005876,1.22e-17,1;UBERON:0004874,1.22e-17,1;UBERON:0000941,1.44e-17,1;UBERON:0001785,1.44e-17,1;UBERON:0002464,1.44e-17,1;UBERON:0004904,1.44e-17,1;UBERON:0001021,1.44e-17,1;UBERON:0003902,1.44e-17,1;UBERON:0005425,1.44e-17,1;UBERON:0004876,3.53e-14,11;UBERON:0003101,2.10e-12,22;UBERON:0000079,2.10e-12,22;UBERON:0003714,1.86e-09,2;UBERON:0005162,1.86e-09,2;UBERON:0000122,1.86e-09,2;UBERON:0000058,1.57e-08,19;UBERON:0000080,2.29e-08,9;UBERON:0002120,2.29e-08,9;UBERON:0004875,2.29e-08,9;UBERON:0005721,2.29e-08,9;UBERON:0005754,2.29e-08,9;UBERON:0007297,2.29e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.448346041655403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0,2.95394953340702,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0.46112780877612,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0,0,5.12959723704208,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79562669187248,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,1.42769420259154,0,0.353909170043221,0,0,0,0,0,0,0,0,2.09525355585138,0,0,0,0,0,0,0,0.548257766857182,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,5.50403165248208,0,0,0,0,0,2.31644057466312,0,0,0,0,0.233939463462106,0,0,0,0,0,0.771741581079447,0,0,0.245148321753905,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0,0,0,8.03370027071169,0.458729283404541,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0,0,0,0,0,0,0,0.202117188958219,0.217716747896961,0,0,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p@chr12:18794697..18794700,+ | |short_description=p@chr12:18794697..18794700,+ | ||
}} | }} |
Latest revision as of 07:20, 24 July 2015
Short description: | p@chr12:18794697..18794700, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:18794697..18794700, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.23e-50 | 3 |
internal male genitalia | 2.23e-50 | 3 |
duct of male reproductive system | 5.23e-38 | 4 |
male reproductive organ | 2.05e-24 | 11 |
seminal vesicle | 3.75e-18 | 1 |
seminal fluid secreting gland | 3.75e-18 | 1 |
vas deferens | 4.44e-18 | 1 |
spermatic cord | 4.44e-18 | 1 |
epididymis | 7.37e-18 | 1 |
penis | 1.22e-17 | 1 |
intromittent organ | 1.22e-17 | 1 |
lateral plate mesenchyme | 1.22e-17 | 1 |
undifferentiated genital tubercle | 1.22e-17 | 1 |
somatopleure | 1.22e-17 | 1 |
cranial nerve II | 1.44e-17 | 1 |
cranial nerve | 1.44e-17 | 1 |
nerve trunk | 1.44e-17 | 1 |
nerve connecting eye with brain | 1.44e-17 | 1 |
nerve | 1.44e-17 | 1 |
retinal neural layer | 1.44e-17 | 1 |
presumptive neural retina | 1.44e-17 | 1 |
urogenital ridge | 3.53e-14 | 11 |
male organism | 2.10e-12 | 22 |
male reproductive system | 2.10e-12 | 22 |
neural tissue | 1.86e-09 | 2 |
multi cell component structure | 1.86e-09 | 2 |
neuron projection bundle | 1.86e-09 | 2 |
duct | 1.57e-08 | 19 |
mesonephros | 2.29e-08 | 9 |
pronephros | 2.29e-08 | 9 |
nephrogenic cord | 2.29e-08 | 9 |
pronephric mesoderm | 2.29e-08 | 9 |
rostral part of nephrogenic cord | 2.29e-08 | 9 |
presumptive pronephric mesoderm | 2.29e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.03e-17 | 1 |
endocrine pancreas cancer | 1.03e-17 | 1 |
pancreatic endocrine carcinoma | 1.03e-17 | 1 |
signet ring cell adenocarcinoma | 1.44e-09 | 2 |