FFCP PHASE1:Hg19::chr12:32908111..32908130,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:32908111..32908130,- | |||
|description=CAGE_peak_at_chr12:32908111..32908130,- | |description=CAGE_peak_at_chr12:32908111..32908130,- | ||
|id=chr12:32908111..32908130,- | |id=chr12:32908111..32908130,- | ||
|ontology_enrichment_celltype=CL:0000066!1.94e-31!254;CL:0002076!8.86e-11!43;CL:0000076!1.57e-10!62;CL:0000223!2.42e-09!59;CL:0002251!1.10e-08!21;CL:0002321!4.61e-08!248;CL:0000548!5.04e-08!679;CL:0000004!5.04e-08!679;CL:0000255!5.04e-08!679;CL:0000012!1.16e-07!682;CL:0000220!1.85e-07!246;CL:0000063!7.05e-07!578 | |ontology_enrichment_celltype=CL:0000066!1.94e-31!254;CL:0002076!8.86e-11!43;CL:0000076!1.57e-10!62;CL:0000223!2.42e-09!59;CL:0002251!1.10e-08!21;CL:0002321!4.61e-08!248;CL:0000548!5.04e-08!679;CL:0000004!5.04e-08!679;CL:0000255!5.04e-08!679;CL:0000012!1.16e-07!682;CL:0000220!1.85e-07!246;CL:0000063!7.05e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000039;9.59e-18;7!CL:0000586;9.59e-18;7!CL:0002322;2.18e-16;5!CL:0002166;6.29e-11;3!CL:0002159;1.02e-10;14!CL:0002621;3.92e-10;3!CL:0000240;6.69e-09;6!CL:0000311;6.69e-09;6!CL:0000079;6.69e-09;6!CL:0000237;6.69e-09;6!CL:0002077;1.06e-08;34!CL:0000083;4.36e-08;4!CL:0002327;4.36e-08;4!CL:0002251;6.88e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.97e-19,253;CL:0000039,6.17e-18,7;CL:0000586,6.17e-18,7;CL:0002322,1.91e-16,5;CL:0002166,5.37e-11,3;CL:0002159,9.35e-11,14;CL:0002621,1.44e-10,3;CL:0002077,1.74e-09,34;CL:0000223,7.61e-09,58;CL:0000240,7.62e-09,6;CL:0000311,7.62e-09,6;CL:0000079,7.62e-09,6;CL:0000237,7.62e-09,6;CL:0000036,7.62e-09,6;CL:0000357,7.62e-09,6;CL:0000114,7.62e-09,6;CL:0002076,2.60e-08,42;CL:0002327,2.70e-08,4;CL:0000083,5.99e-08,4;CL:0002251,4.58e-07,20;CL:0002321,5.70e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000357;6.69e-09;6!CL:0000114;6.69e-09;6!UBERON:0009117;2.02e-08;10!UBERON:0005564;2.02e-08;10!CL:0000223;9.87e-07;58 | |||
|ontology_enrichment_disease=DOID:305!4.63e-22!106;DOID:14566!1.85e-21!239;DOID:162!2.75e-21!235;DOID:0050687!5.39e-18!143;DOID:0050686!1.44e-08!137;DOID:1749!4.30e-07!14 | |ontology_enrichment_disease=DOID:305!4.63e-22!106;DOID:14566!1.85e-21!239;DOID:162!2.75e-21!235;DOID:0050687!5.39e-18!143;DOID:0050686!1.44e-08!137;DOID:1749!4.30e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1793;4.36e-08;4!DOID:4074;1.98e-07;2!DOID:4905;1.98e-07;2!DOID:3498;1.98e-07;2!DOID:3095;6.91e-07;22!DOID:2994;6.91e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.42e-08,106;DOID:1793,5.99e-08,4;DOID:4074,2.98e-07,2;DOID:4905,2.98e-07,2;DOID:3498,2.98e-07,2;DOID:0050687,4.84e-07,143;DOID:3095,5.97e-07,22;DOID:2994,5.97e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.84e-10!72;UBERON:0001007!1.20e-08!155;UBERON:0001555!1.20e-08!155;UBERON:0007026!1.20e-08!155;UBERON:0004119!1.26e-08!169;UBERON:0000925!1.26e-08!169;UBERON:0006595!1.26e-08!169;UBERON:0008947!1.61e-08!38;UBERON:0003258!1.61e-08!38;UBERON:0004921!4.98e-08!129;UBERON:0004185!4.98e-08!129;UBERON:0000077!2.19e-07!130;UBERON:0001041!3.36e-07!98;UBERON:0000072!4.00e-07!46;UBERON:0000065!5.83e-07!53;UBERON:0005153!8.54e-07!37 | |ontology_enrichment_uberon=UBERON:0001004!2.84e-10!72;UBERON:0001007!1.20e-08!155;UBERON:0001555!1.20e-08!155;UBERON:0007026!1.20e-08!155;UBERON:0004119!1.26e-08!169;UBERON:0000925!1.26e-08!169;UBERON:0006595!1.26e-08!169;UBERON:0008947!1.61e-08!38;UBERON:0003258!1.61e-08!38;UBERON:0004921!4.98e-08!129;UBERON:0004185!4.98e-08!129;UBERON:0000077!2.19e-07!130;UBERON:0001041!3.36e-07!98;UBERON:0000072!4.00e-07!46;UBERON:0000065!5.83e-07!53;UBERON:0005153!8.54e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.92e-10;3!UBERON:0001708;2.75e-08;4!UBERON:0008895;2.75e-08;4!UBERON:0003729;3.37e-08;13!UBERON:0001911;4.36e-08;4!UBERON:0000473;2.92e-07;8!UBERON:0000161;4.59e-07;19!UBERON:0000166;4.59e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.44e-10,3;UBERON:0003729,1.83e-08,13;UBERON:0001708,2.45e-08,4;UBERON:0008895,2.45e-08,4;UBERON:0001911,2.70e-08,4;UBERON:0005333,2.70e-08,4;UBERON:0008425,2.70e-08,4;UBERON:0005311,2.70e-08,4;UBERON:0000473,2.66e-07,8;UBERON:0000076,9.78e-07,8;UBERON:0011159,9.82e-07,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0.30120591877825,1.10926203050036,0,0.710846162437108,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.087834785693126,0,0,0.741568885568859,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0.694281003215189,0,0,0.550236083880135,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0,0.976248230192678,0,1.62028389576352,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0,0.506522046658319,0,0,0,0,0,0.98667019366864,0,0.942974704487816,0.326923806226917,0,0,0.234321431833797,0.312160076830321,1.1409436430889,0.149448680551801,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0.453728732640084,0,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.292311015483596,0,0,0,0,0.10075209822764,0,1.73934767846967,1.90922284413584,2.58124135850103,1.21973706129595,2.38553582978673,2.5562667431294,1.96956004529204,3.02785021050754,0.72995471815166,0,0,0,0,0,0.946454400318751,0.168584690078102,0.482022059766964,0.661763836394364,1.30727666455444,0.474541238222193,0.539325232640658,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,3.29250856225877,1.1240175325762,1.60846355858609,2.22212268380471,0,0,0,0,0.234817388471643,0.721832238805369,0,0.380508304469197,1.58040879591855,0,0,0.234004265139238,0.148631162288728,4.68669169933885,1.51183915378974,4.25325291727159,3.04498977189684,2.61570544662566,1.91691339582606,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,1.48418066444991,0.308419387605311,0.177561725313127,0.164254312027618,0,0,0.483437798366489,2.80709058424599,0.644566922551274,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0,0,0,2.60024098414608,0,0.096670718292122,0.308097234229289,0,0,0.214840489736547,0,0.170453254832202,0,0.991709492165869,0.192190067365106,0,0,0.464845549297286,0,0,0,0,0,0.37064843820784,0.572499546967965,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,1.58510321173008,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.0982490410131212,0.35667105148125,0,0,0,0,0,0.769776901804097,2.01090682660736,1.08890984861323,0,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0,0.213425530045242,0,0,0.383010740264733,0.211673582723883,0,0,0.684704037099577,0.156679895773023,0,0.338583555603207,0.481764225311099,0.201799707191048,0.425846237690326,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0.561421621224659,0,0,0,0,0.47748896947538,0,0,0,0,0.445234820091624,0.494411622680279,0.844501632511974,0,0,0.251932747854276,0.20453736500431,0.369254416383208,0,0.629078458031288,0.358042349351218,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0.437299999980979,0,0.341380344856499,0,0.472775363535873,0,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0.557694977114413,0,0.113942055847001,0,3.59030577639089,2.93347904189422,0.957003479195758,0.0915975934018623,0,0,0.31396051279005,0,0.225595660617181,0,0,0,0.158936578980379,0,0.326465616318295,0.424059214301822,0.649165919226273,0,0,0,0,0,0,0,0,0,0.547364367646998,1.17398771359254,2.42780379534093,0,0,0.30607276163049,0,1.50323419414493,0.103688191397247,0.664653872707185,0,0.313932918407225,0,0.853828638089378,1.24807205711825,0,0.195984794828755,0.69647365264322,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.0969890164884194,0.794305140223502,0,0.137041924646751,0,0,1.36885967914362,0,0,0.799238438328521,2.3054466744657,0.229073192331831,0.343189995723929,0.14405479798815,0.372757606696298,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0.600420288709789,0,0,0,0.262887354279314,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0.393709926058995,0.0846733320657845,0,0,2.08979093004525,2.61324929534744,2.07720169014593,0.2249738915515,0.77380195455795,0.0607495566580247,0.335434687599266,0,0.104909176269996,0.950403028674658,0.35857467866569,1.34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| ||
|short_description=p@chr12:32908111..32908130,- | |short_description=p@chr12:32908111..32908130,- | ||
}} | }} |
Latest revision as of 08:14, 24 July 2015
Short description: | p@chr12:32908111..32908130, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:32908111..32908130, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.97e-19 | 253 |
germ line cell | 6.17e-18 | 7 |
germ cell | 6.17e-18 | 7 |
embryonic stem cell | 1.91e-16 | 5 |
epithelial cell of Malassez | 5.37e-11 | 3 |
general ecto-epithelial cell | 9.35e-11 | 14 |
gingival epithelial cell | 1.44e-10 | 3 |
ecto-epithelial cell | 1.74e-09 | 34 |
endodermal cell | 7.61e-09 | 58 |
stratified squamous epithelial cell | 7.62e-09 | 6 |
keratin accumulating cell | 7.62e-09 | 6 |
stratified epithelial cell | 7.62e-09 | 6 |
keratinizing barrier epithelial cell | 7.62e-09 | 6 |
epithelial fate stem cell | 7.62e-09 | 6 |
stratified epithelial stem cell | 7.62e-09 | 6 |
surface ectodermal cell | 7.62e-09 | 6 |
endo-epithelial cell | 2.60e-08 | 42 |
mammary gland epithelial cell | 2.70e-08 | 4 |
epithelial cell of pancreas | 5.99e-08 | 4 |
epithelial cell of alimentary canal | 4.58e-07 | 20 |
embryonic cell | 5.70e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.44e-10 | 3 |
mouth mucosa | 1.83e-08 | 13 |
jaw skeleton | 2.45e-08 | 4 |
splanchnocranium | 2.45e-08 | 4 |
mammary gland | 2.70e-08 | 4 |
mammary bud | 2.70e-08 | 4 |
mammary ridge | 2.70e-08 | 4 |
mammary placode | 2.70e-08 | 4 |
testis | 2.66e-07 | 8 |
external ectoderm | 9.78e-07 | 8 |
primary subdivision of cranial skeletal system | 9.82e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.42e-08 | 106 |
pancreatic cancer | 5.99e-08 | 4 |
pancreas adenocarcinoma | 2.98e-07 | 2 |
pancreatic carcinoma | 2.98e-07 | 2 |
pancreatic ductal adenocarcinoma | 2.98e-07 | 2 |
cell type cancer | 4.84e-07 | 143 |
germ cell and embryonal cancer | 5.97e-07 | 22 |
germ cell cancer | 5.97e-07 | 22 |