FFCP PHASE1:Hg19::chr12:52881440..52881469,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52881440..52881469,- | |||
|coexpression_cluster_id=C594 | |||
|description=CAGE_peak_at_chr12:52881440..52881469,- | |description=CAGE_peak_at_chr12:52881440..52881469,- | ||
|id=chr12:52881440..52881469,- | |id=chr12:52881440..52881469,- | ||
|ontology_enrichment_celltype=CL:0002076!3.41e-26!43;CL:0002159!7.46e-20!13;CL:0000223!1.95e-17!59;CL:0000066!9.75e-17!254;CL:0002368!1.07e-16!13;CL:0000622!9.90e-14!5;CL:0000244!1.59e-11!4;CL:0000731!1.59e-11!4;CL:0000154!2.21e-11!6;CL:0002251!2.61e-11!21;CL:0002621!6.50e-10!3;CL:0002328!8.44e-10!3;CL:0002077!1.20e-09!33;CL:0000349!2.56e-09!3;CL:0002541!2.56e-09!3;CL:0002577!2.56e-09!3;CL:0002231!3.68e-09!3;CL:0002166!3.89e-09!3;CL:0002623!6.94e-09!3;CL:0000362!1.24e-08!8;CL:0002202!6.96e-08!9;CL:0002632!6.96e-08!9;CL:0000240!9.73e-08!6;CL:0000311!9.73e-08!6;CL:0000079!9.73e-08!6;CL:0000237!9.73e-08!6;CL:0000036!9.73e-08!6;CL:0000357!9.73e-08!6;CL:0000114!9.73e-08!6;CL:0000150!1.84e-07!9 | |ontology_enrichment_celltype=CL:0002076!3.41e-26!43;CL:0002159!7.46e-20!13;CL:0000223!1.95e-17!59;CL:0000066!9.75e-17!254;CL:0002368!1.07e-16!13;CL:0000622!9.90e-14!5;CL:0000244!1.59e-11!4;CL:0000731!1.59e-11!4;CL:0000154!2.21e-11!6;CL:0002251!2.61e-11!21;CL:0002621!6.50e-10!3;CL:0002328!8.44e-10!3;CL:0002077!1.20e-09!33;CL:0000349!2.56e-09!3;CL:0002541!2.56e-09!3;CL:0002577!2.56e-09!3;CL:0002231!3.68e-09!3;CL:0002166!3.89e-09!3;CL:0002623!6.94e-09!3;CL:0000362!1.24e-08!8;CL:0002202!6.96e-08!9;CL:0002632!6.96e-08!9;CL:0000240!9.73e-08!6;CL:0000311!9.73e-08!6;CL:0000079!9.73e-08!6;CL:0000237!9.73e-08!6;CL:0000036!9.73e-08!6;CL:0000357!9.73e-08!6;CL:0000114!9.73e-08!6;CL:0000150!1.84e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.02e-18;42!CL:0002368;8.23e-17;13!CL:0002621;7.52e-15;3!CL:0002328;1.06e-14;3!CL:0002159;1.10e-14;14!CL:0000349;2.73e-14;19!CL:0002577;6.83e-14;3!CL:0000244;1.04e-10;4!CL:0000731;1.04e-10;4!CL:0002251;3.78e-10;20!CL:0000575;1.36e-09;2!CL:0000622;1.47e-08;5!CL:0002202;1.83e-08;9!CL:0002632;1.83e-08;9!CL:0002077;1.06e-07;34!CL:0002541;2.12e-07;3!CL:0000154;3.34e-07;6!CL:0000240;3.42e-07;6!CL:0000311;3.42e-07;6!CL:0000079;3.42e-07;6!CL:0000237;3.42e-07;6!CL:0002231;3.42e-07;3!CL:0002166;7.06e-07;3!CL:0002623;8.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.36e-24,42;CL:0002368,9.07e-17,13;CL:0000223,1.32e-16,58;CL:0002621,6.86e-15,3;CL:0002159,9.20e-15,14;CL:0002328,1.04e-14,3;CL:0000349,2.79e-14,19;CL:0002577,6.11e-14,3;CL:0000066,4.21e-13,253;CL:0000244,1.08e-10,4;CL:0000731,1.08e-10,4;CL:0002251,3.37e-10,20;CL:0000575,9.53e-10,2;CL:0002077,4.77e-09,34;CL:0000622,1.24e-08,5;CL:0002202,1.91e-08,9;CL:0002632,1.91e-08,9;CL:0002541,2.12e-07,3;CL:0000154,2.90e-07,6;CL:0002231,3.27e-07,3;CL:0000240,3.45e-07,6;CL:0000311,3.45e-07,6;CL:0000079,3.45e-07,6;CL:0000237,3.45e-07,6;CL:0000036,3.45e-07,6;CL:0000357,3.45e-07,6;CL:0000114,3.45e-07,6;CL:0002166,6.96e-07,3;CL:0002623,7.38e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;2.23e-10;58!CL:0000357;3.42e-07;6!CL:0000114;3.42e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.06e-22!14;UBERON:0000158!2.06e-22!14;UBERON:0003124!5.94e-19!7;UBERON:0000166!3.07e-16!21;UBERON:0000478!2.10e-14!24;UBERON:0001004!2.58e-14!72;UBERON:0000161!4.16e-14!35;UBERON:0000165!1.31e-13!28;UBERON:0000930!1.31e-13!28;UBERON:0004119!1.43e-13!169;UBERON:0000925!1.43e-13!169;UBERON:0006595!1.43e-13!169;UBERON:0001987!2.39e-11!4;UBERON:0004340!2.39e-11!4;UBERON:0003102!1.92e-10!95;UBERON:0001949!6.50e-10!3;UBERON:0004815!8.44e-10!3;UBERON:0002031!8.44e-10!3;UBERON:0000476!2.56e-09!3;UBERON:0000920!2.56e-09!3;UBERON:0001444!2.70e-09!48;UBERON:0000365!3.22e-09!5;UBERON:0005910!1.12e-07!6;UBERON:0002185!2.00e-07!4;UBERON:0001044!2.22e-07!6;UBERON:0003293!2.22e-07!6;UBERON:0003294!2.22e-07!6;UBERON:0010047!2.22e-07!6;UBERON:0000167!2.22e-07!6;UBERON:0004923!2.75e-07!57;UBERON:0000065!4.38e-07!53;UBERON:0001708!6.16e-07!4;UBERON:0001704!6.16e-07!4;UBERON:0000305!7.89e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;7.52e-15;3!UBERON:0004815;1.06e-14;3!UBERON:0002031;1.06e-14;3!UBERON:0000478;6.81e-14;24!UBERON:0000486;2.69e-13;12!UBERON:0005631;1.18e-11;10!UBERON:0000158;1.18e-11;10!UBERON:0001987;1.52e-10;4!UBERON:0002185;5.33e-09;5!UBERON:0000365;1.17e-08;5!UBERON:0005911;6.29e-08;36!UBERON:0003124;2.12e-07;3!UBERON:0000920;2.12e-07;3!UBERON:0005910;2.78e-07;6!UBERON:0000165;4.16e-07;28!UBERON:0004807;4.18e-07;22!UBERON:0001043;5.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.58e-20,14;UBERON:0000158,7.58e-20,14;UBERON:0003124,2.80e-16,7;UBERON:0001949,6.86e-15,3;UBERON:0004815,1.04e-14,3;UBERON:0002031,1.04e-14,3;UBERON:0000478,7.03e-14,24;UBERON:0004119,9.69e-11,160;UBERON:0000925,9.69e-11,160;UBERON:0006595,9.69e-11,160;UBERON:0001987,1.40e-10,4;UBERON:0004340,1.40e-10,4;UBERON:0003102,2.76e-09,99;UBERON:0002185,5.26e-09,5;UBERON:0000365,1.21e-08,5;UBERON:0001004,7.75e-08,74;UBERON:0000033,1.33e-07,56;UBERON:0004923,1.57e-07,66;UBERON:0000920,2.12e-07,3;UBERON:0005910,2.84e-07,6;UBERON:0000166,4.60e-07,22;UBERON:0000161,4.77e-07,36;UBERON:0001043,5.16e-07,3;UBERON:0009143,5.16e-07,3;UBERON:0000165,7.30e-07,29;UBERON:0000930,7.30e-07,29 | |||
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| ||
|short_description=p@chr12:52881440..52881469,- | |short_description=p@chr12:52881440..52881469,- | ||
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Latest revision as of 09:33, 24 July 2015
Short description: | p@chr12:52881440..52881469, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52881440..52881469, - |
Coexpression cluster: | C594_Keratinocyte_Placental_amniotic_Esophageal_tongue_Corneal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.58e-20 | 14 |
membranous layer | 7.58e-20 | 14 |
chorion | 2.80e-16 | 7 |
gingival epithelium | 6.86e-15 | 3 |
lower respiratory tract epithelium | 1.04e-14 | 3 |
epithelium of bronchus | 1.04e-14 | 3 |
extraembryonic structure | 7.03e-14 | 24 |
endoderm-derived structure | 9.69e-11 | 160 |
endoderm | 9.69e-11 | 160 |
presumptive endoderm | 9.69e-11 | 160 |
placenta | 1.40e-10 | 4 |
allantois | 1.40e-10 | 4 |
surface structure | 2.76e-09 | 99 |
bronchus | 5.26e-09 | 5 |
urothelium | 1.21e-08 | 5 |
respiratory system | 7.75e-08 | 74 |
head | 1.33e-07 | 56 |
organ component layer | 1.57e-07 | 66 |
egg chorion | 2.12e-07 | 3 |
transitional epithelium | 2.84e-07 | 6 |
oral opening | 4.60e-07 | 22 |
orifice | 4.77e-07 | 36 |
esophagus | 5.16e-07 | 3 |
esophageal region | 5.16e-07 | 3 |
mouth | 7.30e-07 | 29 |
stomodeum | 7.30e-07 | 29 |