FFCP PHASE1:Hg19::chr12:52911502..52911509,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52911502..52911509,+ | |||
|coexpression_cluster_id=C207 | |coexpression_cluster_id=C207 | ||
|description=CAGE_peak_at_chr12:52911502..52911509,+ | |description=CAGE_peak_at_chr12:52911502..52911509,+ | ||
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|ontology_enrichment_celltype=CL:0002076!3.23e-22!43;CL:0002159!5.59e-21!13;CL:0000223!2.07e-15!59;CL:0000066!5.28e-14!254;CL:0000244!1.26e-13!4;CL:0000731!1.26e-13!4;CL:0002327!1.77e-13!4;CL:0000575!1.25e-12!2;CL:0002251!6.64e-12!21;CL:0002368!1.18e-10!13;CL:0000622!1.28e-10!5;CL:0002077!6.56e-10!33;CL:0000240!4.77e-09!6;CL:0000311!4.77e-09!6;CL:0000079!4.77e-09!6;CL:0000237!4.77e-09!6;CL:0000036!4.77e-09!6;CL:0000357!4.77e-09!6;CL:0000114!4.77e-09!6;CL:0000154!6.28e-09!6;CL:0002166!1.49e-08!3;CL:0002231!2.24e-08!3;CL:0002623!3.13e-08!3;CL:0000362!4.09e-07!8 | |ontology_enrichment_celltype=CL:0002076!3.23e-22!43;CL:0002159!5.59e-21!13;CL:0000223!2.07e-15!59;CL:0000066!5.28e-14!254;CL:0000244!1.26e-13!4;CL:0000731!1.26e-13!4;CL:0002327!1.77e-13!4;CL:0000575!1.25e-12!2;CL:0002251!6.64e-12!21;CL:0002368!1.18e-10!13;CL:0000622!1.28e-10!5;CL:0002077!6.56e-10!33;CL:0000240!4.77e-09!6;CL:0000311!4.77e-09!6;CL:0000079!4.77e-09!6;CL:0000237!4.77e-09!6;CL:0000036!4.77e-09!6;CL:0000357!4.77e-09!6;CL:0000114!4.77e-09!6;CL:0000154!6.28e-09!6;CL:0002166!1.49e-08!3;CL:0002231!2.24e-08!3;CL:0002623!3.13e-08!3;CL:0000362!4.09e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000244;1.17e-33;4!CL:0000731;1.17e-33;4!CL:0000575;5.96e-18;2!CL:0000307;2.74e-12;3!CL:0002159;1.57e-10;14!CL:0000312;5.54e-08;5!CL:0000240;7.37e-07;6!CL:0000311;7.37e-07;6!CL:0000079;7.37e-07;6!CL:0000237;7.37e-07;6 | |ontology_enrichment_celltype_v019=CL:0000244;1.17e-33;4!CL:0000731;1.17e-33;4!CL:0000575;5.96e-18;2!CL:0000307;2.74e-12;3!CL:0002159;1.57e-10;14!CL:0000312;5.54e-08;5!CL:0000240;7.37e-07;6!CL:0000311;7.37e-07;6!CL:0000079;7.37e-07;6!CL:0000237;7.37e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.17e-33,4;CL:0000731,1.17e-33,4;CL:0000575,5.48e-18,2;CL:0000068,2.89e-12,3;CL:0000069,2.89e-12,3;CL:0000307,2.89e-12,3;CL:0000377,2.89e-12,3;CL:0002159,1.57e-10,14;CL:0000312,5.73e-08,5;CL:0000240,7.58e-07,6;CL:0000311,7.58e-07,6;CL:0000079,7.58e-07,6;CL:0000237,7.58e-07,6;CL:0000036,7.58e-07,6;CL:0000357,7.58e-07,6;CL:0000114,7.58e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000377;2.74e-12;3!CL:0000357;7.37e-07;6!CL:0000114;7.37e-07;6 | |ontology_enrichment_development_v019=CL:0000377;2.74e-12;3!CL:0000357;7.37e-07;6!CL:0000114;7.37e-07;6 | ||
|ontology_enrichment_disease=DOID:3151!2.50e-07!1;DOID:3149!2.50e-07!1 | |ontology_enrichment_disease=DOID:3151!2.50e-07!1;DOID:3149!2.50e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3151;5.97e-34;1!DOID:3149;5.97e-34;1!DOID:3451;9.86e-18;2!DOID:4159;9.86e-18;2!DOID:0060122;9.86e-18;2 | |ontology_enrichment_disease_v019=DOID:3151;5.97e-34;1!DOID:3149;5.97e-34;1!DOID:3451;9.86e-18;2!DOID:4159;9.86e-18;2!DOID:0060122;9.86e-18;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,5.05e-34,1;DOID:3149,5.05e-34,1;DOID:3451,9.07e-18,2;DOID:4159,9.07e-18,2;DOID:0060122,9.07e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0001911!1.77e-13!4;UBERON:0005333!1.77e-13!4;UBERON:0008425!1.77e-13!4;UBERON:0005311!1.77e-13!4;UBERON:0003102!1.23e-11!95;UBERON:0000161!3.28e-11!35;UBERON:0000365!5.35e-11!5;UBERON:0003729!3.41e-10!5;UBERON:0004119!7.09e-10!169;UBERON:0000925!7.09e-10!169;UBERON:0006595!7.09e-10!169;UBERON:0005910!3.06e-09!6;UBERON:0000166!6.44e-09!21;UBERON:0000165!1.04e-08!28;UBERON:0000930!1.04e-08!28;UBERON:0001723!2.24e-08!3;UBERON:0001033!2.24e-08!3;UBERON:0010056!2.24e-08!3;UBERON:0001444!7.53e-08!48;UBERON:0005157!1.91e-07!51;UBERON:0001004!2.93e-07!72;UBERON:0000076!5.81e-07!8 | |ontology_enrichment_uberon=UBERON:0001911!1.77e-13!4;UBERON:0005333!1.77e-13!4;UBERON:0008425!1.77e-13!4;UBERON:0005311!1.77e-13!4;UBERON:0003102!1.23e-11!95;UBERON:0000161!3.28e-11!35;UBERON:0000365!5.35e-11!5;UBERON:0003729!3.41e-10!5;UBERON:0004119!7.09e-10!169;UBERON:0000925!7.09e-10!169;UBERON:0006595!7.09e-10!169;UBERON:0005910!3.06e-09!6;UBERON:0000166!6.44e-09!21;UBERON:0000165!1.04e-08!28;UBERON:0000930!1.04e-08!28;UBERON:0001723!2.24e-08!3;UBERON:0001033!2.24e-08!3;UBERON:0010056!2.24e-08!3;UBERON:0001444!7.53e-08!48;UBERON:0005157!1.91e-07!51;UBERON:0001004!2.93e-07!72;UBERON:0000076!5.81e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.55e-27;5!UBERON:0005910;7.58e-23;6!UBERON:0000486;5.67e-12;12!UBERON:0000964;1.17e-09;4!UBERON:0010409;1.17e-09;4!UBERON:0000014;1.50e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0000365;3.55e-27;5!UBERON:0005910;7.58e-23;6!UBERON:0000486;5.67e-12;12!UBERON:0000964;1.17e-09;4!UBERON:0010409;1.17e-09;4!UBERON:0000014;1.50e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.55e-27,5;UBERON:0005910,7.58e-23,6;UBERON:0000964,1.12e-09,4;UBERON:0010409,1.12e-09,4;UBERON:0004348,1.12e-09,4;UBERON:0005427,1.12e-09,4;UBERON:0000014,1.44e-09,4 | |||
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|short_description=p@chr12:52911502..52911509,+ | |short_description=p@chr12:52911502..52911509,+ | ||
}} | }} |
Latest revision as of 09:37, 24 July 2015
Short description: | p@chr12:52911502..52911509, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52911502..52911509, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.17e-33 | 4 |
urothelial cell | 1.17e-33 | 4 |
corneal epithelial cell | 5.48e-18 | 2 |
duct epithelial cell | 2.89e-12 | 3 |
branched duct epithelial cell | 2.89e-12 | 3 |
tracheal epithelial cell | 2.89e-12 | 3 |
tracheoblast | 2.89e-12 | 3 |
general ecto-epithelial cell | 1.57e-10 | 14 |
keratinocyte | 5.73e-08 | 5 |
stratified squamous epithelial cell | 7.58e-07 | 6 |
keratin accumulating cell | 7.58e-07 | 6 |
stratified epithelial cell | 7.58e-07 | 6 |
keratinizing barrier epithelial cell | 7.58e-07 | 6 |
epithelial fate stem cell | 7.58e-07 | 6 |
stratified epithelial stem cell | 7.58e-07 | 6 |
surface ectodermal cell | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.55e-27 | 5 |
transitional epithelium | 7.58e-23 | 6 |
cornea | 1.12e-09 | 4 |
eye surface | 1.12e-09 | 4 |
optic eminence | 1.12e-09 | 4 |
corneal primordium | 1.12e-09 | 4 |
zone of skin | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.05e-34 | 1 |
keratoacanthoma | 5.05e-34 | 1 |
skin carcinoma | 9.07e-18 | 2 |
skin cancer | 9.07e-18 | 2 |
integumentary system cancer | 9.07e-18 | 2 |