FFCP PHASE1:Hg19::chr12:65959570..65959573,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:65959570..65959573,- | |||
|description=CAGE_peak_at_chr12:65959570..65959573,- | |description=CAGE_peak_at_chr12:65959570..65959573,- | ||
|id=chr12:65959570..65959573,- | |id=chr12:65959570..65959573,- | ||
|ontology_enrichment_celltype=CL:1000306!7.38e-12!4;CL:0002547!7.38e-12!4;CL:0000359!1.37e-11!32;CL:0002583!5.53e-11!2;CL:0000192!1.92e-10!42;CL:0000514!1.92e-10!42;CL:0000055!2.79e-10!180;CL:0000057!1.36e-09!75;CL:0002539!1.40e-08!10;CL:0000187!1.05e-07!54;CL:0000680!3.33e-07!57;CL:0000056!3.33e-07!57;CL:0000355!3.33e-07!57;CL:0000048!6.37e-07!430;CL:0000183!6.74e-07!59;CL:0000393!9.41e-07!60;CL:0000211!9.41e-07!60;CL:0000723!9.98e-07!436 | |ontology_enrichment_celltype=CL:1000306!7.38e-12!4;CL:0002547!7.38e-12!4;CL:0000359!1.37e-11!32;CL:0002583!5.53e-11!2;CL:0000192!1.92e-10!42;CL:0000514!1.92e-10!42;CL:0000055!2.79e-10!180;CL:0000057!1.36e-09!75;CL:0002539!1.40e-08!10;CL:0000187!1.05e-07!54;CL:0000680!3.33e-07!57;CL:0000056!3.33e-07!57;CL:0000355!3.33e-07!57;CL:0000048!6.37e-07!430;CL:0000183!6.74e-07!59;CL:0000393!9.41e-07!60;CL:0000211!9.41e-07!60;CL:0000723!9.98e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002596;5.69e-21;2!CL:0002539;8.81e-17;10!CL:0000346;1.31e-14;3!CL:1000428;1.31e-14;3!CL:0000359;1.21e-12;32!CL:1000306;2.66e-11;4!CL:0002547;2.66e-11;4!CL:0002559;2.63e-09;5!CL:0000192;4.54e-09;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002596,5.70e-21,2;CL:0002539,8.81e-17,10;CL:0000346,1.22e-14,3;CL:1000428,1.22e-14,3;CL:0000359,6.59e-12,32;CL:1000306,2.80e-11,4;CL:0002547,2.80e-11,4;CL:0002559,2.53e-09,5;CL:0000192,4.57e-09,43;CL:0000514,4.57e-09,43;CL:0000187,3.00e-07,55;CL:0000680,6.54e-07,58;CL:0000056,6.54e-07,58;CL:0000355,6.54e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;4.54e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!2.38e-12!14 | |ontology_enrichment_disease=DOID:2394!2.38e-12!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005396;5.69e-21;2!UBERON:0004573;5.42e-19;33!UBERON:0004571;5.42e-19;33!UBERON:0000947;9.57e-18;21!UBERON:0010191;9.57e-18;21!UBERON:0004237;8.81e-17;10!UBERON:0004695;8.81e-17;10!UBERON:0002111;8.81e-17;10!UBERON:0004178;8.81e-17;10!UBERON:0000412;1.31e-14;3!UBERON:0001992;1.31e-14;3!UBERON:0001135;1.49e-11;15!UBERON:0004797;2.66e-11;4!UBERON:0000415;2.66e-11;4!UBERON:0007240;2.66e-11;4!UBERON:0005742;2.66e-11;4!UBERON:0005734;2.66e-11;4!UBERON:0004664;2.66e-11;4!UBERON:0004663;2.66e-11;4!UBERON:0001637;9.60e-10;42!UBERON:0003509;9.60e-10;42!UBERON:0004572;9.60e-10;42!UBERON:0002073;2.63e-09;5!UBERON:0007500;1.86e-08;56!UBERON:0001981;1.86e-08;56!UBERON:0004537;1.86e-08;56!UBERON:0000055;6.85e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,5.70e-21,2;UBERON:0004573,8.59e-20,33;UBERON:0004571,8.59e-20,33;UBERON:0000947,9.85e-18,21;UBERON:0010191,9.85e-18,21;UBERON:0004237,8.81e-17,10;UBERON:0004695,8.81e-17,10;UBERON:0002111,8.81e-17,10;UBERON:0004178,8.81e-17,10;UBERON:0001637,1.01e-15,42;UBERON:0003509,1.01e-15,42;UBERON:0004572,1.01e-15,42;UBERON:0000412,1.22e-14,3;UBERON:0001992,1.22e-14,3;UBERON:0001135,1.50e-11,15;UBERON:0007500,2.13e-11,59;UBERON:0001981,2.13e-11,59;UBERON:0004537,2.13e-11,59;UBERON:0006965,2.13e-11,59;UBERON:0000415,2.80e-11,4;UBERON:0007240,2.80e-11,4;UBERON:0005742,2.80e-11,4;UBERON:0005734,2.80e-11,4;UBERON:0004664,2.80e-11,4;UBERON:0004663,2.80e-11,4;UBERON:0000055,5.60e-10,68;UBERON:0002329,1.36e-09,71;UBERON:0003059,1.36e-09,71;UBERON:0007282,1.36e-09,71;UBERON:0004290,1.36e-09,71;UBERON:0009618,1.36e-09,71;UBERON:0003077,1.81e-09,72;UBERON:0007285,1.81e-09,72;UBERON:0007524,2.39e-09,73;UBERON:0002073,2.53e-09,5;UBERON:0005086,2.53e-09,5;UBERON:0007503,8.66e-09,78;UBERON:0002049,8.84e-09,78;UBERON:0007798,8.84e-09,78;UBERON:0000486,2.69e-08,83;UBERON:0004872,2.75e-08,83;UBERON:0004797,5.38e-07,7 | |||
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|short_description=p@chr12:65959570..65959573,- | |short_description=p@chr12:65959570..65959573,- | ||
}} | }} |
Latest revision as of 11:25, 24 July 2015
Short description: | p@chr12:65959570..65959573, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:65959570..65959573, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 5.70e-21 | 2 |
aortic smooth muscle cell | 8.81e-17 | 10 |
hair follicle dermal papilla cell | 1.22e-14 | 3 |
stem cell of epidermis | 1.22e-14 | 3 |
vascular associated smooth muscle cell | 6.59e-12 | 32 |
fibroblast of tunica adventitia of artery | 2.80e-11 | 4 |
fibroblast of the aortic adventitia | 2.80e-11 | 4 |
hair follicle cell | 2.53e-09 | 5 |
smooth muscle cell | 4.57e-09 | 43 |
smooth muscle myoblast | 4.57e-09 | 43 |
muscle cell | 3.00e-07 | 55 |
muscle precursor cell | 6.54e-07 | 58 |
myoblast | 6.54e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.54e-07 | 58 |