FFCP PHASE1:Hg19::chr13:48807607..48807618,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-27bp_to_AK308603_5end | |||
|cluster_id=chr13:48807607..48807618,- | |||
|description=CAGE_peak_3_at_AK308603_5end | |||
|id=chr13:48807607..48807618,- | |||
|ontology_enrichment_celltype=CL:0000766!1.84e-08!76;CL:0002057!1.67e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.44e-23;3!CL:0000094;2.21e-15;8!CL:0000081;3.10e-11;11!CL:0000860;4.52e-10;33!CL:0002057;4.52e-10;33!CL:0000473;3.97e-09;39!CL:0000234;3.97e-09;39!CL:0000511;1.05e-08;1!CL:0002625;1.05e-08;1!CL:0000216;1.05e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,7.29e-24,3;CL:0000094,1.77e-15,8;CL:0000766,1.59e-12,72;CL:0000081,2.65e-11,11;CL:0000511,6.16e-09,1;CL:0002625,6.16e-09,1;CL:0000216,6.16e-09,1;CL:0000473,9.37e-09,48;CL:0000234,9.37e-09,48;CL:0000860,8.91e-08,42;CL:0002057,8.91e-08,42;CL:0000763,1.09e-07,108;CL:0000049,1.09e-07,108;CL:0002194,8.67e-07,59;CL:0000576,8.67e-07,59;CL:0000040,8.67e-07,59;CL:0000559,8.67e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.81e-23;3!UBERON:0010227;1.05e-08;1!UBERON:0010226;1.05e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-11!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.18e-12;6!UBERON:0004151;8.87e-11;3!UBERON:0005795;1.05e-08;1!UBERON:0002084;1.05e-08;1!UBERON:0002079;1.05e-08;1!UBERON:0001136;1.05e-08;1!UBERON:0001343;1.05e-08;1!UBERON:0002082;1.05e-08;1!UBERON:0004910;1.05e-08;1!UBERON:0004813;1.05e-08;1!UBERON:0002680;4.89e-08;9!UBERON:0001895;4.89e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.11e-12,6;UBERON:0006215,6.11e-12,6;UBERON:0004151,9.35e-11,3;UBERON:0001136,6.16e-09,1;UBERON:0001343,6.16e-09,1;UBERON:0004910,6.16e-09,1;UBERON:0005154,6.16e-09,1;UBERON:0005295,6.16e-09,1;UBERON:0004813,6.16e-09,1;UBERON:0005297,6.16e-09,1;UBERON:0005294,6.16e-09,1;UBERON:0010141,6.16e-09,1;UBERON:0005891,6.16e-09,1;UBERON:0002079,9.74e-09,1;UBERON:0002084,1.22e-08,1;UBERON:0002082,1.22e-08,1;UBERON:0010226,1.22e-08,1;UBERON:0002680,4.03e-08,9;UBERON:0001895,4.03e-08,9;UBERON:0010092,4.03e-08,9 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0,0,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0.393364276848904,0.767658796194425,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0.401088894940283,0.434021741431704,0.223915474239924,0.647787332037959,0,0.290796477559129,0.377875943688809,0.485168122375632,1.39457422143411,0,0.619412741790207,1.43846196161075,1.0246428261164,0,0.344745680736619,0.645484683583826,0,0,0.818718450173537,0.449446968890169,1.22433556948361,0.320929027076094,0.639337125799041,0,0.598390972864896,1.27867425159808,0.870627715885752,0,0.622822248995575,0.502497330513487,1.5644487552606,0.434377689410233,1.81619850790011,0,0,0.211255286311942,0,0,0.22465726229299,0.300353785683013,0.16072558669708,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.393419540227666,0,0,0,0,0.473447805734733,0,0.111410456885174,0.589211814949674,0,0,0,0.130059347559878,0,0.276350017785848,0.289803085735052,0,0,1.04535523804977,0.226618685395132,0,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0.255725123687061,0,0.50133791063589,0.434539556882471,0,0,0,0,0.263504357079378,0.982343066232845,0.364295288292542,0,0.649094787309367,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0.66944122552934,0,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0.311211035399766,0.538842688278752,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0,0.226864366320042,0,0.427114777637135,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0.386521706326594,0.818238361772504,0,0.121973706129595,0,0,0.310983165046111,0,0,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.277765335475589,0,0,0,0,0.117408694235822,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0.492434012174795,0,0.445893486866185,0,0,0,0,0.290633938513962,0,0,0.176096868026452,0.414656231081544,0.720599767084807,0.37872730027914,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0,0,0.22001485746285,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.099972991182057,0,2.00902836572851,0,0,0,0,0.144781306667579,0.410952645100767,0,0.224170287987055,0,0.646882724578552,0.256686072559497,0,0,0,0,0,2.99602809578873,5.9832291840805,1.65766205374414,0,0,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0.280660094433074,0.128139149255701,0,0.64341568457443,0,0,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0.368323955743585,0,0.182091168006717,0.262248829918848,0,0.308061348417659,0,0,0.211103257785751,0,0.340187410553031,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0,0,0.15350367472613,0,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0.768760269460425,0.127612712494584,0.2023155617111,0,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0.38126038784765,0,0,0.318203247925937,0.78494864019923,0,0,0.235624804691373,0.202182481573316,4.75530963519025,0,0,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0,0,0.0982490410131212,0,0,0.422215270595328,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0.284136146806413,0.23874448473769,0.296964680832639,0,0.994147647766298,0.140669416410513,0.111308705022906,0,0,0.398495976502139,0,0.251932747854276,0.20453736500431,0.246169610922139,0,0,0,0,0.295930216910801,4.7896618469388,0,0.969332746095218,0.371072392647405,1.99613798001194,0.260427761085233,0,0,0.455173793141999,0,0,0,0,0.173624994933292,0,0.241192877250816,1.52581736317083,1.54810963903714,2.95547618953547,0.219385397153973,0.10893846351899,0.41827123283581,0.307801034015188,0.113942055847001,0.23056390438806,0,0.217294743844016,0,0.183195186803725,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0.141353071433941,0.649165919226273,0,0.265372693510018,0,0.296521128680622,0,0,0.539209063845416,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.31593289814244,0,0.103688191397247,0.66465387270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| |||
|short_description=p3@AK308603 | |||
}} |
Latest revision as of 16:28, 24 July 2015
Short description: | p3@AK308603 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AK308603_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_AK308603_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 7.29e-24 | 3 |
granulocyte | 1.77e-15 | 8 |
myeloid leukocyte | 1.59e-12 | 72 |
blood cell | 2.65e-11 | 11 |
androgen binding protein secreting cell | 6.16e-09 | 1 |
seminiferous tubule epithelial cell | 6.16e-09 | 1 |
Sertoli cell | 6.16e-09 | 1 |
defensive cell | 9.37e-09 | 48 |
phagocyte | 9.37e-09 | 48 |
classical monocyte | 8.91e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.91e-08 | 42 |
myeloid cell | 1.09e-07 | 108 |
common myeloid progenitor | 1.09e-07 | 108 |
monopoietic cell | 8.67e-07 | 59 |
monocyte | 8.67e-07 | 59 |
monoblast | 8.67e-07 | 59 |
promonocyte | 8.67e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.11e-12 | 6 |
rhombic lip | 6.11e-12 | 6 |
cardiac chamber | 9.35e-11 | 3 |
mesothelium | 6.16e-09 | 1 |
seminiferous tubule of testis | 6.16e-09 | 1 |
epithelium of male gonad | 6.16e-09 | 1 |
epithelial cord | 6.16e-09 | 1 |
sex cord | 6.16e-09 | 1 |
seminiferous tubule epithelium | 6.16e-09 | 1 |
testis sex cord | 6.16e-09 | 1 |
genital ridge | 6.16e-09 | 1 |
primitive sex cord of indifferent gonad | 6.16e-09 | 1 |
coelomic epithelium | 6.16e-09 | 1 |
left cardiac atrium | 9.74e-09 | 1 |
heart left ventricle | 1.22e-08 | 1 |
cardiac ventricle | 1.22e-08 | 1 |
future cardiac ventricle | 1.22e-08 | 1 |
regional part of metencephalon | 4.03e-08 | 9 |
metencephalon | 4.03e-08 | 9 |
future metencephalon | 4.03e-08 | 9 |