FFCP PHASE1:Hg19::chr13:94028319..94028321,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:94028319..94028321,+ | |||
|description=CAGE_peak_at_chr13:94028319..94028321,+ | |description=CAGE_peak_at_chr13:94028319..94028321,+ | ||
|id=chr13:94028319..94028321,+ | |id=chr13:94028319..94028321,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;5.59e-50;3!CL:0000067;5.59e-50;3!CL:0005012;5.59e-50;3!CL:0002304;5.59e-50;3!CL:0000075;3.83e-10;27!CL:0000710;4.51e-08;20 | |ontology_enrichment_celltype_v019=CL:0000064;5.59e-50;3!CL:0000067;5.59e-50;3!CL:0005012;5.59e-50;3!CL:0002304;5.59e-50;3!CL:0000075;3.83e-10;27!CL:0000710;4.51e-08;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.89e-50,3;CL:0000067,1.89e-50,3;CL:0005012,1.89e-50,3;CL:0002304,1.89e-50,3;CL:0000075,3.31e-10,27;CL:0000710,3.85e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.80e-07;11!UBERON:0003056;7.92e-07;3 | |ontology_enrichment_development_v019=UBERON:0004161;5.80e-07;11!UBERON:0003056;7.92e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;6.76e-18;1!DOID:4549;6.76e-18;1!DOID:5861;6.76e-18;1!DOID:6496;6.76e-18;1 | |ontology_enrichment_disease_v019=DOID:3371;6.76e-18;1!DOID:4549;6.76e-18;1!DOID:5861;6.76e-18;1!DOID:6496;6.76e-18;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,5.26e-18,1;DOID:4549,5.26e-18,1;DOID:5861,5.26e-18,1;DOID:6496,5.26e-18,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;5.59e-50;3!UBERON:0001775;5.59e-50;3!UBERON:0000488;1.04e-37;4!UBERON:0002203;2.05e-25;6!UBERON:0001768;2.05e-25;6!UBERON:0002200;2.05e-25;6!UBERON:0007625;2.31e-24;11!UBERON:0000019;8.23e-22;19!UBERON:0000047;8.23e-22;19!UBERON:0004088;8.23e-22;19!UBERON:0010230;8.23e-22;19!UBERON:0000970;9.93e-21;20!UBERON:0002104;9.47e-20;21!UBERON:0001456;9.47e-20;21!UBERON:0001801;3.08e-19;14!UBERON:0000020;4.80e-18;23!UBERON:0001282;6.76e-18;1!UBERON:0009842;6.76e-18;1!UBERON:0003704;6.76e-18;1!UBERON:0001171;6.76e-18;1!UBERON:0001172;6.76e-18;1!UBERON:0001032;2.68e-17;24!UBERON:0004456;2.68e-17;24!UBERON:0006876;3.44e-14;11!UBERON:0001905;1.27e-09;2!UBERON:0002757;1.27e-09;2!UBERON:0010134;1.27e-09;2!UBERON:0005408;1.27e-09;2!UBERON:0001899;1.27e-09;2!UBERON:0010371;8.50e-09;31!UBERON:0001444;4.67e-07;48!UBERON:0002418;7.92e-07;3!UBERON:0004755;7.92e-07;3!UBERON:0001280;7.92e-07;3!UBERON:0004647;7.92e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001778;5.59e-50;3!UBERON:0001775;5.59e-50;3!UBERON:0000488;1.04e-37;4!UBERON:0002203;2.05e-25;6!UBERON:0001768;2.05e-25;6!UBERON:0002200;2.05e-25;6!UBERON:0007625;2.31e-24;11!UBERON:0000019;8.23e-22;19!UBERON:0000047;8.23e-22;19!UBERON:0004088;8.23e-22;19!UBERON:0010230;8.23e-22;19!UBERON:0000970;9.93e-21;20!UBERON:0002104;9.47e-20;21!UBERON:0001456;9.47e-20;21!UBERON:0001801;3.08e-19;14!UBERON:0000020;4.80e-18;23!UBERON:0001282;6.76e-18;1!UBERON:0009842;6.76e-18;1!UBERON:0003704;6.76e-18;1!UBERON:0001171;6.76e-18;1!UBERON:0001172;6.76e-18;1!UBERON:0001032;2.68e-17;24!UBERON:0004456;2.68e-17;24!UBERON:0006876;3.44e-14;11!UBERON:0001905;1.27e-09;2!UBERON:0002757;1.27e-09;2!UBERON:0010134;1.27e-09;2!UBERON:0005408;1.27e-09;2!UBERON:0001899;1.27e-09;2!UBERON:0010371;8.50e-09;31!UBERON:0001444;4.67e-07;48!UBERON:0002418;7.92e-07;3!UBERON:0004755;7.92e-07;3!UBERON:0001280;7.92e-07;3!UBERON:0004647;7.92e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.89e-50,3;UBERON:0001775,1.89e-50,3;UBERON:0000488,4.61e-38,4;UBERON:0002203,1.19e-25,6;UBERON:0001768,1.19e-25,6;UBERON:0002200,1.19e-25,6;UBERON:0007625,1.61e-24,11;UBERON:0000019,6.45e-21,20;UBERON:0000047,6.45e-21,20;UBERON:0010312,6.45e-21,20;UBERON:0004088,6.45e-21,20;UBERON:0010230,6.45e-21,20;UBERON:0003072,6.45e-21,20;UBERON:0004128,6.45e-21,20;UBERON:0003071,6.45e-21,20;UBERON:0000970,6.28e-20,21;UBERON:0002104,6.28e-20,21;UBERON:0001801,2.32e-19,14;UBERON:0001456,4.98e-19,22;UBERON:0001282,8.72e-18,1;UBERON:0009842,8.72e-18,1;UBERON:0003704,8.72e-18,1;UBERON:0001171,8.72e-18,1;UBERON:0001172,8.72e-18,1;UBERON:0000020,1.87e-17,24;UBERON:0001032,1.87e-17,24;UBERON:0004456,1.87e-17,24;UBERON:0006876,2.57e-14,11;UBERON:0005085,1.55e-13,31;UBERON:0003056,1.82e-09,61;UBERON:0001905,2.02e-09,2;UBERON:0002757,2.02e-09,2;UBERON:0010134,2.02e-09,2;UBERON:0005408,2.02e-09,2;UBERON:0001899,2.02e-09,2;UBERON:0001444,1.42e-08,49;UBERON:0000033,1.69e-07,56;UBERON:0003075,5.25e-07,82;UBERON:0007284,5.25e-07,82;UBERON:0002418,7.28e-07,3;UBERON:0004755,7.28e-07,3;UBERON:0001280,8.62e-07,3;UBERON:0004647,8.62e-07,3;UBERON:0005171,8.62e-07,3;UBERON:0000153,9.06e-07,62;UBERON:0007811,9.06e-07,62 | |||
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|short_description=p@chr13:94028319..94028321,+ | |short_description=p@chr13:94028319..94028321,+ | ||
}} | }} |
Latest revision as of 17:28, 24 July 2015
Short description: | p@chr13:94028319..94028321, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:94028319..94028321, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.89e-50 | 3 |
ciliated epithelial cell | 1.89e-50 | 3 |
multi-ciliated epithelial cell | 1.89e-50 | 3 |
non-pigmented ciliary epithelial cell | 1.89e-50 | 3 |
columnar/cuboidal epithelial cell | 3.31e-10 | 27 |
neurecto-epithelial cell | 3.85e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 5.26e-18 | 1 |
extraosseous chondrosarcoma | 5.26e-18 | 1 |
myxoid chondrosarcoma | 5.26e-18 | 1 |
extraskeletal myxoid chondrosarcoma | 5.26e-18 | 1 |