FFCP PHASE1:Hg19::chr14:62014381..62014392,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:62014381..62014392,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr14:62014381..62014392,+ | |description=CAGE_peak_at_chr14:62014381..62014392,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!2.00e-68!42;CL:0000860!1.09e-67!45;CL:0002194!2.11e-48!63;CL:0000576!2.11e-48!63;CL:0000040!2.11e-48!63;CL:0000559!2.11e-48!63;CL:0002009!1.09e-46!65;CL:0000839!7.89e-43!70;CL:0000557!4.02e-42!71;CL:0000766!1.49e-41!76;CL:0002087!3.25e-29!119;CL:0000763!1.09e-25!112;CL:0000049!1.09e-25!112;CL:0000738!3.79e-25!140;CL:0002031!4.52e-24!124;CL:0000037!7.54e-19!172;CL:0000566!7.54e-19!172;CL:0000988!2.45e-17!182;CL:0002032!2.63e-17!165;CL:0000837!2.63e-17!165;CL:0000515!3.21e-14!4;CL:0002320!1.21e-10!365;CL:0000134!2.83e-10!358;CL:0000048!3.41e-10!430;CL:0000723!6.69e-10!436;CL:0000034!1.59e-09!444;CL:0000224!5.85e-09!4;CL:0000219!1.65e-08!390 | |ontology_enrichment_celltype=CL:0002057!2.00e-68!42;CL:0000860!1.09e-67!45;CL:0002194!2.11e-48!63;CL:0000576!2.11e-48!63;CL:0000040!2.11e-48!63;CL:0000559!2.11e-48!63;CL:0002009!1.09e-46!65;CL:0000839!7.89e-43!70;CL:0000557!4.02e-42!71;CL:0000766!1.49e-41!76;CL:0002087!3.25e-29!119;CL:0000763!1.09e-25!112;CL:0000049!1.09e-25!112;CL:0000738!3.79e-25!140;CL:0002031!4.52e-24!124;CL:0000037!7.54e-19!172;CL:0000566!7.54e-19!172;CL:0000988!2.45e-17!182;CL:0002032!2.63e-17!165;CL:0000837!2.63e-17!165;CL:0000515!3.21e-14!4;CL:0002320!1.21e-10!365;CL:0000134!2.83e-10!358;CL:0000048!3.41e-10!430;CL:0000723!6.69e-10!436;CL:0000034!1.59e-09!444;CL:0000224!5.85e-09!4;CL:0000219!1.65e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.98e-72;33!CL:0002057;3.98e-72;33!CL:0000473;5.01e-48;39!CL:0000234;5.01e-48;39!CL:0000576;8.24e-32;48!CL:0000766;1.56e-18;69!CL:0002087;1.94e-14;104!CL:0000228;2.25e-14;1!CL:0002372;2.25e-14;1!CL:0000763;4.65e-11;100 | |ontology_enrichment_celltype_v019=CL:0000860;3.98e-72;33!CL:0002057;3.98e-72;33!CL:0000473;5.01e-48;39!CL:0000234;5.01e-48;39!CL:0000576;8.24e-32;48!CL:0000766;1.56e-18;69!CL:0002087;1.94e-14;104!CL:0000228;2.25e-14;1!CL:0002372;2.25e-14;1!CL:0000763;4.65e-11;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.96e-60,42;CL:0002057,3.96e-60,42;CL:0000473,1.83e-52,48;CL:0000234,1.83e-52,48;CL:0002194,1.01e-41,59;CL:0000576,1.01e-41,59;CL:0000040,1.01e-41,59;CL:0000559,1.01e-41,59;CL:0002009,2.46e-40,61;CL:0000839,3.14e-37,66;CL:0000557,1.16e-36,67;CL:0000766,4.62e-34,72;CL:0000763,2.33e-22,108;CL:0000049,2.33e-22,108;CL:0002087,6.36e-21,115;CL:0002031,5.34e-20,120;CL:0000738,1.72e-17,136;CL:0002032,1.47e-14,161;CL:0000837,1.47e-14,161;CL:0000228,2.11e-14,1;CL:0002372,2.11e-14,1;CL:0000037,6.84e-14,168;CL:0000988,4.13e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.95e-43;42 | |ontology_enrichment_development_v019=CL:0002057;6.95e-43;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.65e-39!80;UBERON:0001474!6.84e-36!86;UBERON:0002390!2.24e-33!102;UBERON:0003061!2.24e-33!102;UBERON:0002193!1.18e-29!112;UBERON:0004765!2.13e-29!101;UBERON:0001434!2.13e-29!101;UBERON:0002405!1.29e-26!115;UBERON:0002204!4.16e-21!167;UBERON:0003081!2.30e-12!216;UBERON:0002384!4.39e-10!375 | |ontology_enrichment_uberon=UBERON:0002371!3.65e-39!80;UBERON:0001474!6.84e-36!86;UBERON:0002390!2.24e-33!102;UBERON:0003061!2.24e-33!102;UBERON:0002193!1.18e-29!112;UBERON:0004765!2.13e-29!101;UBERON:0001434!2.13e-29!101;UBERON:0002405!1.29e-26!115;UBERON:0002204!4.16e-21!167;UBERON:0003081!2.30e-12!216;UBERON:0002384!4.39e-10!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.18e-32,76;UBERON:0001474,8.49e-30,82;UBERON:0004765,4.66e-27,90;UBERON:0002405,3.77e-26,93;UBERON:0002390,9.26e-25,98;UBERON:0003061,9.26e-25,98;UBERON:0001434,3.05e-24,100;UBERON:0002193,2.33e-22,108;UBERON:0002204,3.08e-16,167;UBERON:0003081,3.09e-11,203;UBERON:0000926,7.36e-08,315;UBERON:0004120,7.36e-08,315;UBERON:0006603,7.36e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,1.23882548358041,2.58923153089935,1.0246428261164,1.41889337933151,0.689491361473237,1.93645405075148,4.06279459783025,0.752969358170419,0,0.674170453335254,3.36692281607993,2.24650318953266,0.639337125799041,0.659702600373432,0.199463657621632,0,10.7377418292576,8.5107783703671,1.86846674698672,0.75374599577023,0.521482918420201,0.217188844705117,7.26479403160043,4.78760926783834,2.53169909952708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,1.23882548358041,2.58923153089935,1.0246428261164,1.41889337933151,0.689491361473237,1.93645405075148,4.06279459783025,0.752969358170419,0,0.674170453335254,3.36692281607993,2.24650318953266,0.639337125799041,0.659702600373432,0.199463657621632,0,10.7377418292576,8.5107783703671,1.86846674698672,0.75374599577023,0.521482918420201,0.217188844705117,7.26479403160043,4.78760926783834,2.53169909952708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:62014381..62014392,+ | |short_description=p@chr14:62014381..62014392,+ | ||
}} | }} |
Latest revision as of 21:41, 24 July 2015
Short description: | p@chr14:62014381..62014392, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:62014381..62014392, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.96e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.96e-60 | 42 |
defensive cell | 1.83e-52 | 48 |
phagocyte | 1.83e-52 | 48 |
monopoietic cell | 1.01e-41 | 59 |
monocyte | 1.01e-41 | 59 |
monoblast | 1.01e-41 | 59 |
promonocyte | 1.01e-41 | 59 |
macrophage dendritic cell progenitor | 2.46e-40 | 61 |
myeloid lineage restricted progenitor cell | 3.14e-37 | 66 |
granulocyte monocyte progenitor cell | 1.16e-36 | 67 |
myeloid leukocyte | 4.62e-34 | 72 |
myeloid cell | 2.33e-22 | 108 |
common myeloid progenitor | 2.33e-22 | 108 |
nongranular leukocyte | 6.36e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 5.34e-20 | 120 |
leukocyte | 1.72e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.47e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-14 | 161 |
multinucleate cell | 2.11e-14 | 1 |
myotube | 2.11e-14 | 1 |
hematopoietic stem cell | 6.84e-14 | 168 |
hematopoietic cell | 4.13e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.18e-32 | 76 |
bone element | 8.49e-30 | 82 |
skeletal element | 4.66e-27 | 90 |
immune system | 3.77e-26 | 93 |
hematopoietic system | 9.26e-25 | 98 |
blood island | 9.26e-25 | 98 |
skeletal system | 3.05e-24 | 100 |
hemolymphoid system | 2.33e-22 | 108 |
musculoskeletal system | 3.08e-16 | 167 |
lateral plate mesoderm | 3.09e-11 | 203 |
mesoderm | 7.36e-08 | 315 |
mesoderm-derived structure | 7.36e-08 | 315 |
presumptive mesoderm | 7.36e-08 | 315 |