FFCP PHASE1:Hg19::chr14:91709732..91709754,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:91709732..91709754,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr14:91709732..91709754,- | |description=CAGE_peak_at_chr14:91709732..91709754,- | ||
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|ontology_enrichment_celltype=CL:0002057!1.71e-47!42;CL:0000860!1.42e-43!45;CL:0002009!7.80e-32!65;CL:0002194!3.66e-29!63;CL:0000576!3.66e-29!63;CL:0000040!3.66e-29!63;CL:0000559!3.66e-29!63;CL:0000557!3.31e-28!71;CL:0000766!2.00e-25!76;CL:0000839!3.34e-25!70;CL:0002087!3.47e-18!119;CL:0000763!4.01e-18!112;CL:0000049!4.01e-18!112;CL:0002031!4.10e-18!124;CL:0000738!1.68e-17!140;CL:0000034!8.78e-16!444;CL:0000723!9.58e-16!436;CL:0000048!1.55e-15!430;CL:0002032!9.71e-14!165;CL:0000837!9.71e-14!165;CL:0000037!1.85e-13!172;CL:0000566!1.85e-13!172;CL:0000988!9.21e-13!182;CL:0002320!6.78e-12!365;CL:0000134!7.23e-12!358;CL:0002371!5.84e-10!591;CL:0000219!9.63e-10!390;CL:0000144!1.15e-08!625;CL:0000012!8.89e-07!682 | |ontology_enrichment_celltype=CL:0002057!1.71e-47!42;CL:0000860!1.42e-43!45;CL:0002009!7.80e-32!65;CL:0002194!3.66e-29!63;CL:0000576!3.66e-29!63;CL:0000040!3.66e-29!63;CL:0000559!3.66e-29!63;CL:0000557!3.31e-28!71;CL:0000766!2.00e-25!76;CL:0000839!3.34e-25!70;CL:0002087!3.47e-18!119;CL:0000763!4.01e-18!112;CL:0000049!4.01e-18!112;CL:0002031!4.10e-18!124;CL:0000738!1.68e-17!140;CL:0000034!8.78e-16!444;CL:0000723!9.58e-16!436;CL:0000048!1.55e-15!430;CL:0002032!9.71e-14!165;CL:0000837!9.71e-14!165;CL:0000037!1.85e-13!172;CL:0000566!1.85e-13!172;CL:0000988!9.21e-13!182;CL:0002320!6.78e-12!365;CL:0000134!7.23e-12!358;CL:0002371!5.84e-10!591;CL:0000219!9.63e-10!390;CL:0000144!1.15e-08!625;CL:0000012!8.89e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.56e-106;33!CL:0002057;2.56e-106;33!CL:0000473;9.29e-71;39!CL:0000234;9.29e-71;39!CL:0000576;8.92e-52;48!CL:0000766;6.41e-28;69!CL:0000763;3.91e-13;100!CL:0002087;7.94e-12;104!CL:0000738;2.65e-07;136!CL:0000228;4.70e-07;1!CL:0002372;4.70e-07;1 | |ontology_enrichment_celltype_v019=CL:0000860;2.56e-106;33!CL:0002057;2.56e-106;33!CL:0000473;9.29e-71;39!CL:0000234;9.29e-71;39!CL:0000576;8.92e-52;48!CL:0000766;6.41e-28;69!CL:0000763;3.91e-13;100!CL:0002087;7.94e-12;104!CL:0000738;2.65e-07;136!CL:0000228;4.70e-07;1!CL:0002372;4.70e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.14e-96,42;CL:0002057,6.14e-96,42;CL:0000473,2.75e-83,48;CL:0000234,2.75e-83,48;CL:0002194,1.44e-65,59;CL:0000576,1.44e-65,59;CL:0000040,1.44e-65,59;CL:0000559,1.44e-65,59;CL:0002009,2.79e-63,61;CL:0000839,3.69e-58,66;CL:0000557,3.17e-57,67;CL:0000766,6.13e-53,72;CL:0000763,1.14e-33,108;CL:0000049,1.14e-33,108;CL:0002087,2.63e-31,115;CL:0002031,8.68e-30,120;CL:0000738,1.14e-25,136;CL:0002032,7.35e-21,161;CL:0000837,7.35e-21,161;CL:0000037,9.09e-20,168;CL:0000988,1.73e-18,177;CL:0000034,6.61e-10,441;CL:0000723,2.57e-09,433;CL:0000048,1.11e-08,427;CL:0000134,4.81e-08,354;CL:0002320,8.93e-08,361;CL:0000228,4.06e-07,1;CL:0002372,4.06e-07,1;CL:0000219,7.90e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.46e-69;42!CL:0000049;2.66e-10;108 | |ontology_enrichment_development_v019=CL:0002057;5.46e-69;42!CL:0000049;2.66e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.55e-24!80;UBERON:0001474!7.63e-23!86;UBERON:0004765!1.16e-22!101;UBERON:0001434!1.16e-22!101;UBERON:0002204!1.30e-22!167;UBERON:0002390!1.76e-17!102;UBERON:0003061!1.76e-17!102;UBERON:0002193!5.77e-15!112;UBERON:0002405!3.25e-14!115;UBERON:0003081!4.97e-14!216;UBERON:0002384!1.24e-11!375;UBERON:0000926!6.38e-07!448;UBERON:0004120!6.38e-07!448;UBERON:0006603!6.38e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!8.55e-24!80;UBERON:0001474!7.63e-23!86;UBERON:0004765!1.16e-22!101;UBERON:0001434!1.16e-22!101;UBERON:0002204!1.30e-22!167;UBERON:0002390!1.76e-17!102;UBERON:0003061!1.76e-17!102;UBERON:0002193!5.77e-15!112;UBERON:0002405!3.25e-14!115;UBERON:0003081!4.97e-14!216;UBERON:0002384!1.24e-11!375;UBERON:0000926!6.38e-07!448;UBERON:0004120!6.38e-07!448;UBERON:0006603!6.38e-07!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.56e-50,76;UBERON:0001474,6.52e-46,82;UBERON:0004765,2.12e-41,90;UBERON:0002405,6.60e-40,93;UBERON:0002390,1.28e-37,98;UBERON:0003061,1.28e-37,98;UBERON:0001434,9.15e-37,100;UBERON:0002193,1.14e-33,108;UBERON:0002204,1.87e-27,167;UBERON:0003081,1.60e-21,203;UBERON:0000926,5.59e-14,315;UBERON:0004120,5.59e-14,315;UBERON:0006603,5.59e-14,315;UBERON:0002384,2.08e-07,371 | |||
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| ||
|short_description=p@chr14:91709732..91709754,- | |short_description=p@chr14:91709732..91709754,- | ||
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Latest revision as of 23:34, 24 July 2015
Short description: | p@chr14:91709732..91709754, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:91709732..91709754, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.14e-96 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.14e-96 | 42 |
defensive cell | 2.75e-83 | 48 |
phagocyte | 2.75e-83 | 48 |
monopoietic cell | 1.44e-65 | 59 |
monocyte | 1.44e-65 | 59 |
monoblast | 1.44e-65 | 59 |
promonocyte | 1.44e-65 | 59 |
macrophage dendritic cell progenitor | 2.79e-63 | 61 |
myeloid lineage restricted progenitor cell | 3.69e-58 | 66 |
granulocyte monocyte progenitor cell | 3.17e-57 | 67 |
myeloid leukocyte | 6.13e-53 | 72 |
myeloid cell | 1.14e-33 | 108 |
common myeloid progenitor | 1.14e-33 | 108 |
nongranular leukocyte | 2.63e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 8.68e-30 | 120 |
leukocyte | 1.14e-25 | 136 |
hematopoietic oligopotent progenitor cell | 7.35e-21 | 161 |
hematopoietic multipotent progenitor cell | 7.35e-21 | 161 |
hematopoietic stem cell | 9.09e-20 | 168 |
hematopoietic cell | 1.73e-18 | 177 |
stem cell | 6.61e-10 | 441 |
somatic stem cell | 2.57e-09 | 433 |
multi fate stem cell | 1.11e-08 | 427 |
mesenchymal cell | 4.81e-08 | 354 |
connective tissue cell | 8.93e-08 | 361 |
multinucleate cell | 4.06e-07 | 1 |
myotube | 4.06e-07 | 1 |
motile cell | 7.90e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.56e-50 | 76 |
bone element | 6.52e-46 | 82 |
skeletal element | 2.12e-41 | 90 |
immune system | 6.60e-40 | 93 |
hematopoietic system | 1.28e-37 | 98 |
blood island | 1.28e-37 | 98 |
skeletal system | 9.15e-37 | 100 |
hemolymphoid system | 1.14e-33 | 108 |
musculoskeletal system | 1.87e-27 | 167 |
lateral plate mesoderm | 1.60e-21 | 203 |
mesoderm | 5.59e-14 | 315 |
mesoderm-derived structure | 5.59e-14 | 315 |
presumptive mesoderm | 5.59e-14 | 315 |
connective tissue | 2.08e-07 | 371 |