FFCP PHASE1:Hg19::chr16:27254686..27254705,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:27254686..27254705,- | |||
|coexpression_cluster_id=C104 | |coexpression_cluster_id=C104 | ||
|description=CAGE_peak_at_chr16:27254686..27254705,- | |description=CAGE_peak_at_chr16:27254686..27254705,- | ||
|id=chr16:27254686..27254705,- | |id=chr16:27254686..27254705,- | ||
|ontology_enrichment_celltype=CL:0000557!3.33e-16!71;CL:0000839!1.45e-15!70;CL:0000763!1.81e-15!112;CL:0000049!1.81e-15!112;CL:0000766!2.02e-15!76;CL:0002057!5.69e-13!42;CL:0002009!2.51e-12!65;CL:0002032!2.76e-12!165;CL:0000837!2.76e-12!165;CL:0002194!4.44e-12!63;CL:0000576!4.44e-12!63;CL:0000040!4.44e-12!63;CL:0000559!4.44e-12!63;CL:0000860!1.40e-11!45;CL:0000988!2.93e-11!182;CL:0002031!3.38e-11!124;CL:0000037!4.28e-11!172;CL:0000566!4.28e-11!172;CL:0000738!8.42e-11!140;CL:0000034!5.35e-10!444;CL:0000048!8.28e-10!430;CL:0000723!9.54e-10!436;CL:0002274!2.14e-08!5;CL:0000457!2.14e-08!5;CL:0002191!2.14e-08!5;CL:0000097!2.14e-08!5;CL:0000831!2.14e-08!5;CL:0002028!2.14e-08!5;CL:0002087!9.64e-08!119 | |ontology_enrichment_celltype=CL:0000557!3.33e-16!71;CL:0000839!1.45e-15!70;CL:0000763!1.81e-15!112;CL:0000049!1.81e-15!112;CL:0000766!2.02e-15!76;CL:0002057!5.69e-13!42;CL:0002009!2.51e-12!65;CL:0002032!2.76e-12!165;CL:0000837!2.76e-12!165;CL:0002194!4.44e-12!63;CL:0000576!4.44e-12!63;CL:0000040!4.44e-12!63;CL:0000559!4.44e-12!63;CL:0000860!1.40e-11!45;CL:0000988!2.93e-11!182;CL:0002031!3.38e-11!124;CL:0000037!4.28e-11!172;CL:0000566!4.28e-11!172;CL:0000738!8.42e-11!140;CL:0000034!5.35e-10!444;CL:0000048!8.28e-10!430;CL:0000723!9.54e-10!436;CL:0002274!2.14e-08!5;CL:0000457!2.14e-08!5;CL:0002191!2.14e-08!5;CL:0000097!2.14e-08!5;CL:0000831!2.14e-08!5;CL:0002028!2.14e-08!5;CL:0002087!9.64e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.71e-50;5!CL:0000163;7.56e-28;9!CL:0000228;3.11e-11;1!CL:0002372;3.11e-11;1!CL:0000766;2.92e-10;69!CL:0000473;9.36e-10;39!CL:0000234;9.36e-10;39!CL:0000860;2.71e-09;33!CL:0002057;2.71e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.45e-50,5;CL:0002028,2.45e-50,5;CL:0000163,5.28e-28,9;CL:0000839,9.62e-20,66;CL:0000557,1.99e-19,67;CL:0000766,5.67e-18,72;CL:0000763,7.78e-16,108;CL:0000049,7.78e-16,108;CL:0000228,2.42e-11,1;CL:0002372,2.42e-11,1;CL:0002031,4.09e-10,120;CL:0002032,6.18e-10,161;CL:0000837,6.18e-10,161;CL:0000473,1.56e-09,48;CL:0000234,1.56e-09,48;CL:0000037,1.97e-09,168;CL:0000988,7.67e-09,177;CL:0000738,1.03e-08,136;CL:0000860,3.10e-08,42;CL:0002057,3.10e-08,42;CL:0002194,1.75e-07,59;CL:0000576,1.75e-07,59;CL:0000040,1.75e-07,59;CL:0000559,1.75e-07,59;CL:0002009,3.22e-07,61;CL:0000151,6.39e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.18e-14!80;UBERON:0001474!2.70e-12!86;UBERON:0002204!3.81e-11!167;UBERON:0002405!9.61e-10!115;UBERON:0004765!1.86e-09!101;UBERON:0001434!1.86e-09!101;UBERON:0002390!3.71e-09!102;UBERON:0003061!3.71e-09!102;UBERON:0002193!4.27e-09!112;UBERON:0003081!1.35e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!4.18e-14!80;UBERON:0001474!2.70e-12!86;UBERON:0002204!3.81e-11!167;UBERON:0002405!9.61e-10!115;UBERON:0004765!1.86e-09!101;UBERON:0001434!1.86e-09!101;UBERON:0002390!3.71e-09!102;UBERON:0003061!3.71e-09!102;UBERON:0002193!4.27e-09!112;UBERON:0003081!1.35e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.03e-17,76;UBERON:0001474,1.37e-15,82;UBERON:0004765,4.65e-14,90;UBERON:0002405,1.50e-13,93;UBERON:0002390,8.96e-13,98;UBERON:0003061,8.96e-13,98;UBERON:0001434,1.74e-12,100;UBERON:0002193,1.97e-11,108;UBERON:0002204,1.69e-09,167;UBERON:0003081,1.94e-07,203 | |||
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|short_description=p@chr16:27254686..27254705,- | |short_description=p@chr16:27254686..27254705,- | ||
}} | }} |
Latest revision as of 07:30, 25 July 2015
Short description: | p@chr16:27254686..27254705, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:27254686..27254705, - |
Coexpression cluster: | C104_Mast_Basophils_immature_CD14_CD34_eye_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.45e-50 | 5 |
basophil mast progenitor cell | 2.45e-50 | 5 |
endocrine cell | 5.28e-28 | 9 |
myeloid lineage restricted progenitor cell | 9.62e-20 | 66 |
granulocyte monocyte progenitor cell | 1.99e-19 | 67 |
myeloid leukocyte | 5.67e-18 | 72 |
myeloid cell | 7.78e-16 | 108 |
common myeloid progenitor | 7.78e-16 | 108 |
multinucleate cell | 2.42e-11 | 1 |
myotube | 2.42e-11 | 1 |
hematopoietic lineage restricted progenitor cell | 4.09e-10 | 120 |
hematopoietic oligopotent progenitor cell | 6.18e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.18e-10 | 161 |
defensive cell | 1.56e-09 | 48 |
phagocyte | 1.56e-09 | 48 |
hematopoietic stem cell | 1.97e-09 | 168 |
hematopoietic cell | 7.67e-09 | 177 |
leukocyte | 1.03e-08 | 136 |
classical monocyte | 3.10e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.10e-08 | 42 |
monopoietic cell | 1.75e-07 | 59 |
monocyte | 1.75e-07 | 59 |
monoblast | 1.75e-07 | 59 |
promonocyte | 1.75e-07 | 59 |
macrophage dendritic cell progenitor | 3.22e-07 | 61 |
secretory cell | 6.39e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.03e-17 | 76 |
bone element | 1.37e-15 | 82 |
skeletal element | 4.65e-14 | 90 |
immune system | 1.50e-13 | 93 |
hematopoietic system | 8.96e-13 | 98 |
blood island | 8.96e-13 | 98 |
skeletal system | 1.74e-12 | 100 |
hemolymphoid system | 1.97e-11 | 108 |
musculoskeletal system | 1.69e-09 | 167 |
lateral plate mesoderm | 1.94e-07 | 203 |