FFCP PHASE1:Hg19::chr16:28192360..28192372,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_AB384470_5end | |association_with_transcript=-7bp_to_AB384470_5end | ||
|cluster_id=chr16:28192360..28192372,- | |||
|coexpression_cluster_id=C623 | |||
|description=CAGE_peak_3_at_AB384470_5end | |description=CAGE_peak_3_at_AB384470_5end | ||
|id=chr16:28192360..28192372,- | |id=chr16:28192360..28192372,- | ||
|ontology_enrichment_celltype=CL:0000766!1.00e-36!76;CL:0002009!6.64e-35!65;CL:0002194!3.83e-34!63;CL:0000576!3.83e-34!63;CL:0000040!3.83e-34!63;CL:0000559!3.83e-34!63;CL:0000738!2.29e-32!140;CL:0000839!1.67e-31!70;CL:0000763!4.55e-31!112;CL:0000049!4.55e-31!112;CL:0000557!5.19e-31!71;CL:0002057!6.88e-28!42;CL:0000037!8.75e-27!172;CL:0000566!8.75e-27!172;CL:0000860!1.77e-25!45;CL:0000988!2.14e-24!182;CL:0002087!2.94e-24!119;CL:0002032!9.80e-24!165;CL:0000837!9.80e-24!165;CL:0002031!1.48e-21!124;CL:0000451!4.30e-12!10;CL:0000990!1.07e-11!8;CL:0002393!2.93e-11!9;CL:0002397!2.93e-11!9;CL:0000775!5.84e-08!3;CL:0000875!2.26e-07!3;CL:0002396!2.26e-07!3;CL:0000094!2.91e-07!8;CL:0000453!2.98e-07!5 | |ontology_enrichment_celltype=CL:0000766!1.00e-36!76;CL:0002009!6.64e-35!65;CL:0002194!3.83e-34!63;CL:0000576!3.83e-34!63;CL:0000040!3.83e-34!63;CL:0000559!3.83e-34!63;CL:0000738!2.29e-32!140;CL:0000839!1.67e-31!70;CL:0000763!4.55e-31!112;CL:0000049!4.55e-31!112;CL:0000557!5.19e-31!71;CL:0002057!6.88e-28!42;CL:0000037!8.75e-27!172;CL:0000566!8.75e-27!172;CL:0000860!1.77e-25!45;CL:0000988!2.14e-24!182;CL:0002087!2.94e-24!119;CL:0002032!9.80e-24!165;CL:0000837!9.80e-24!165;CL:0002031!1.48e-21!124;CL:0000451!4.30e-12!10;CL:0000990!1.07e-11!8;CL:0002393!2.93e-11!9;CL:0002397!2.93e-11!9;CL:0000775!5.84e-08!3;CL:0000875!2.26e-07!3;CL:0002396!2.26e-07!3;CL:0000094!2.91e-07!8;CL:0000453!2.98e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000775;9.30e-41;3!CL:0000094;4.12e-27;8!CL:0000990;3.70e-24;8!CL:0000840;5.56e-21;5!CL:0000451;7.78e-20;10!CL:0000081;7.97e-20;11!CL:0000235;9.46e-10;6!CL:0000771;4.68e-08;2!CL:0000473;4.63e-07;39!CL:0000234;4.63e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,9.96e-41,3;CL:0000094,3.98e-27,8;CL:0000766,7.11e-25,72;CL:0000990,3.70e-24,8;CL:0000840,5.56e-21,5;CL:0001029,5.56e-21,5;CL:0000081,7.78e-20,11;CL:0000451,7.78e-20,10;CL:0000763,3.69e-19,108;CL:0000049,3.69e-19,108;CL:0000738,5.98e-15,136;CL:0002194,2.12e-13,59;CL:0000576,2.12e-13,59;CL:0000040,2.12e-13,59;CL:0000559,2.12e-13,59;CL:0002009,6.07e-13,61;CL:0002032,2.06e-12,161;CL:0000837,2.06e-12,161;CL:0000839,6.38e-12,66;CL:0000037,7.80e-12,168;CL:0000557,9.81e-12,67;CL:0000988,3.70e-11,177;CL:0000235,1.01e-09,6;CL:0000771,4.38e-08,2;CL:0000473,8.67e-07,48;CL:0000234,8.67e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.16e-34!102;UBERON:0003061!1.16e-34!102;UBERON:0002193!2.69e-30!112;UBERON:0002371!2.84e-26!80;UBERON:0001474!1.13e-23!86;UBERON:0002405!1.14e-20!115;UBERON:0004765!1.51e-18!101;UBERON:0001434!1.51e-18!101;UBERON:0003081!3.12e-11!216;UBERON:0002204!1.53e-08!167;UBERON:0004177!7.72e-07!7 | |ontology_enrichment_uberon=UBERON:0002390!1.16e-34!102;UBERON:0003061!1.16e-34!102;UBERON:0002193!2.69e-30!112;UBERON:0002371!2.84e-26!80;UBERON:0001474!1.13e-23!86;UBERON:0002405!1.14e-20!115;UBERON:0004765!1.51e-18!101;UBERON:0001434!1.51e-18!101;UBERON:0003081!3.12e-11!216;UBERON:0002204!1.53e-08!167;UBERON:0004177!7.72e-07!7 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.10e-12,98;UBERON:0003061,3.10e-12,98;UBERON:0002193,5.23e-11,108;UBERON:0002405,1.78e-10,93;UBERON:0002371,2.84e-10,76;UBERON:0001474,1.79e-09,82;UBERON:0004765,1.44e-08,90;UBERON:0001434,1.22e-07,100 | |||
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| ||
|short_description=p3@AB384470 | |short_description=p3@AB384470 | ||
}} | }} |
Latest revision as of 07:37, 25 July 2015
Short description: | p3@AB384470 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AB384470_5end |
Coexpression cluster: | C623_Dendritic_Neutrophils_Eosinophils_Whole_Macrophage_CD14_Basophils |
Association with transcript: | -7bp_to_AB384470_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 9.96e-41 | 3 |
granulocyte | 3.98e-27 | 8 |
myeloid leukocyte | 7.11e-25 | 72 |
conventional dendritic cell | 3.70e-24 | 8 |
immature conventional dendritic cell | 5.56e-21 | 5 |
common dendritic progenitor | 5.56e-21 | 5 |
blood cell | 7.78e-20 | 11 |
dendritic cell | 7.78e-20 | 10 |
myeloid cell | 3.69e-19 | 108 |
common myeloid progenitor | 3.69e-19 | 108 |
leukocyte | 5.98e-15 | 136 |
monopoietic cell | 2.12e-13 | 59 |
monocyte | 2.12e-13 | 59 |
monoblast | 2.12e-13 | 59 |
promonocyte | 2.12e-13 | 59 |
macrophage dendritic cell progenitor | 6.07e-13 | 61 |
hematopoietic oligopotent progenitor cell | 2.06e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.06e-12 | 161 |
myeloid lineage restricted progenitor cell | 6.38e-12 | 66 |
hematopoietic stem cell | 7.80e-12 | 168 |
granulocyte monocyte progenitor cell | 9.81e-12 | 67 |
hematopoietic cell | 3.70e-11 | 177 |
macrophage | 1.01e-09 | 6 |
eosinophil | 4.38e-08 | 2 |
defensive cell | 8.67e-07 | 48 |
phagocyte | 8.67e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.10e-12 | 98 |
blood island | 3.10e-12 | 98 |
hemolymphoid system | 5.23e-11 | 108 |
immune system | 1.78e-10 | 93 |
bone marrow | 2.84e-10 | 76 |
bone element | 1.79e-09 | 82 |
skeletal element | 1.44e-08 | 90 |
skeletal system | 1.22e-07 | 100 |