FFCP PHASE1:Hg19::chr16:57417293..57417299,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-350bp_to_CU674589_5end | |||
|cluster_id=chr16:57417293..57417299,- | |||
|description=CAGE_peak_1_at_CU674589_5end | |||
|id=chr16:57417293..57417299,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002138;2.22e-27;6!CL:0000115;3.83e-10;36!CL:0002188;3.10e-09;5!CL:0002078;1.78e-08;45!CL:0002139;1.21e-07;24!CL:1000746;5.86e-07;7!CL:1000612;5.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.08e-27,6;CL:0002138,2.08e-27,6;CL:0005022,2.08e-27,6;CL:0000115,9.21e-11,36;CL:0002188,2.74e-09,5;CL:0002078,9.12e-09,45;CL:0002139,1.19e-07,24;CL:1000746,5.38e-07,7;CL:1000612,5.38e-07,7;CL:0000213,5.78e-07,58;CL:0000215,5.78e-07,58 | |||
|ontology_enrichment_development_v019=CL:0005022;2.22e-27;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.76e-40!115;UBERON:0001049!3.82e-22!57;UBERON:0005068!3.82e-22!57;UBERON:0006241!3.82e-22!57;UBERON:0007135!3.82e-22!57;UBERON:0001893!1.16e-20!34;UBERON:0000955!4.06e-20!69;UBERON:0006238!4.06e-20!69;UBERON:0003080!5.09e-20!42;UBERON:0002616!3.47e-19!59;UBERON:0005743!4.41e-19!86;UBERON:0002791!5.35e-19!33;UBERON:0001017!7.29e-19!82;UBERON:0002780!2.35e-18!41;UBERON:0001890!2.35e-18!41;UBERON:0006240!2.35e-18!41;UBERON:0002020!2.94e-18!34;UBERON:0003528!2.94e-18!34;UBERON:0000073!7.71e-18!94;UBERON:0001016!7.71e-18!94;UBERON:0001869!1.47e-17!32;UBERON:0003075!2.59e-16!86;UBERON:0007284!2.59e-16!86;UBERON:0002619!1.01e-15!22;UBERON:0002346!2.95e-15!90;UBERON:0001950!5.84e-15!20;UBERON:0004111!8.44e-14!241;UBERON:0003056!1.40e-13!61;UBERON:0000956!1.54e-13!25;UBERON:0000203!1.54e-13!25;UBERON:0000025!6.17e-13!194;UBERON:0000033!8.24e-12!123;UBERON:0000153!9.08e-12!129;UBERON:0007811!9.08e-12!129;UBERON:0000477!1.10e-11!286;UBERON:0004121!4.55e-10!169;UBERON:0000924!1.23e-09!173;UBERON:0006601!1.23e-09!173;UBERON:0000483!7.51e-08!309;UBERON:0000119!1.15e-07!312;UBERON:0001871!1.50e-07!7;UBERON:0002298!1.50e-07!8;UBERON:0000200!3.96e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;7.72e-21;8!UBERON:0004536;7.72e-21;8!UBERON:0006558;7.72e-21;8!UBERON:0002465;6.65e-17;10!UBERON:0000074;5.86e-07;7!UBERON:0001229;5.86e-07;7!UBERON:0002405;6.72e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,7.35e-21,8;UBERON:0004536,7.35e-21,8;UBERON:0006558,7.35e-21,8;UBERON:0002465,6.39e-17,10;UBERON:0010532,5.38e-07,7;UBERON:0000074,5.38e-07,7;UBERON:0001229,5.38e-07,7;UBERON:0001230,5.38e-07,7;UBERON:0003220,5.38e-07,7;UBERON:0005749,5.38e-07,7;UBERON:0004199,5.38e-07,7;UBERON:0004209,5.38e-07,7;UBERON:0004198,5.38e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,2.30986316417718,1.38895653772983,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0.969332746095218,0.463840490809256,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0.279282401272254,0,0,0.399358000997982,0.858452096273142,0,0.268733889946905,0,0,0.472699093843342,0.329663433524666,0.943649613958588,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,1.06787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.1251909307065,0,0,0.248385611765534,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.760729777106397,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.657727735628491,0,0,0.470958557103084,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.134704106029175,0.430333232356058,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p1@CU674589 | |||
}} |
Latest revision as of 10:34, 25 July 2015
Short description: | p1@CU674589 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU674589_5end |
Coexpression cluster: | NA |
Association with transcript: | -350bp_to_CU674589_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.08e-27 | 6 |
endothelial cell of lymphatic vessel | 2.08e-27 | 6 |
vascular lymphangioblast | 2.08e-27 | 6 |
endothelial cell | 9.21e-11 | 36 |
glomerular endothelial cell | 2.74e-09 | 5 |
meso-epithelial cell | 9.12e-09 | 45 |
endothelial cell of vascular tree | 1.19e-07 | 24 |
glomerular cell | 5.38e-07 | 7 |
kidney corpuscule cell | 5.38e-07 | 7 |
lining cell | 5.78e-07 | 58 |
barrier cell | 5.78e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 7.35e-21 | 8 |
lymph vasculature | 7.35e-21 | 8 |
lymphatic part of lymphoid system | 7.35e-21 | 8 |
lymphoid system | 6.39e-17 | 10 |
primitive nephron | 5.38e-07 | 7 |
renal glomerulus | 5.38e-07 | 7 |
renal corpuscle | 5.38e-07 | 7 |
glomerular capsule | 5.38e-07 | 7 |
metanephric mesenchyme | 5.38e-07 | 7 |
glomerular tuft | 5.38e-07 | 7 |
S-shaped body | 5.38e-07 | 7 |
renal vesicle | 5.38e-07 | 7 |
comma-shaped body | 5.38e-07 | 7 |