FFCP PHASE1:Hg19::chr16:62055187..62055188,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:62055187..62055188,+ | |||
|coexpression_cluster_id=C1044 | |coexpression_cluster_id=C1044 | ||
|description=CAGE_peak_at_chr16:62055187..62055188,+ | |description=CAGE_peak_at_chr16:62055187..62055188,+ | ||
|id=chr16:62055187..62055188,+ | |id=chr16:62055187..62055188,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.39e-66!3;CL:1000615!2.39e-66!3;CL:0002306!2.39e-66!3;CL:1000507!6.76e-18!12;CL:1000494!6.76e-18!12;CL:0002681!1.21e-16!13;CL:0002584!1.21e-16!13;CL:1000449!8.02e-14!16;CL:1000497!1.85e-12!18;CL:0002518!1.85e-12!18;CL:0000075!8.32e-09!27 | |ontology_enrichment_celltype=CL:0000239!2.39e-66!3;CL:1000615!2.39e-66!3;CL:0002306!2.39e-66!3;CL:1000507!6.76e-18!12;CL:1000494!6.76e-18!12;CL:0002681!1.21e-16!13;CL:0002584!1.21e-16!13;CL:1000449!8.02e-14!16;CL:1000497!1.85e-12!18;CL:0002518!1.85e-12!18;CL:0000075!8.32e-09!27 | ||
|ontology_enrichment_celltype_v019=CL:0000239;2.39e-66;3!CL:1000615;2.39e-66;3!CL:0002306;2.39e-66;3!CL:1000507;3.81e-21;10!CL:1000494;3.81e-21;10!CL:0002681;6.76e-18;12!CL:0002584;6.76e-18;12!CL:1000449;1.22e-14;15!CL:1000497;4.22e-13;17!CL:0002518;4.22e-13;17!CL:0000075;8.32e-09;27!CL:0002078;4.53e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.39e-66,3;CL:1000615,2.39e-66,3;CL:0002306,2.39e-66,3;CL:1000507,3.81e-21,10;CL:1000494,3.81e-21,10;CL:0002681,6.76e-18,12;CL:0002584,6.76e-18,12;CL:1000449,1.22e-14,15;CL:1000497,4.22e-13,17;CL:0002518,4.22e-13,17;CL:0000075,8.32e-09,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006853!2.39e-66!3;UBERON:0007685!2.39e-66!3;UBERON:0004134!2.39e-66!3;UBERON:0009773!6.76e-18!12;UBERON:0001231!6.76e-18!12;UBERON:0004810!6.76e-18!12;UBERON:0001225!1.21e-16!13;UBERON:0008987!1.21e-16!13;UBERON:0001851!8.02e-14!16;UBERON:0004211!8.02e-14!16;UBERON:0001285!8.02e-14!16;UBERON:0007684!8.02e-14!16;UBERON:0003220!8.02e-14!16;UBERON:0004208!8.02e-14!16;UBERON:0006555!4.22e-13!17;UBERON:0005103!4.22e-13!17;UBERON:0000083!4.22e-13!17;UBERON:0000353!4.22e-13!17;UBERON:0009201!4.22e-13!17;UBERON:0004819!4.22e-13!17;UBERON:0006553!4.22e-13!17;UBERON:0003074!4.22e-13!17;UBERON:0003060!4.22e-13!17;UBERON:0000080!1.85e-12!18;UBERON:0002120!1.85e-12!18;UBERON:0004875!1.85e-12!18;UBERON:0005721!1.85e-12!18;UBERON:0005754!1.85e-12!18;UBERON:0007297!1.85e-12!18;UBERON:0004876!2.29e-11!20;UBERON:0003887!6.74e-11!21;UBERON:0000058!4.34e-09!26;UBERON:0002113!8.32e-09!27;UBERON:0003918!8.32e-09!27;UBERON:0005095!8.32e-09!27;UBERON:0007687!8.32e-09!27;UBERON:0000489!1.18e-07!32;UBERON:0003064!8.21e-07!37 | |ontology_enrichment_uberon=UBERON:0006853!2.39e-66!3;UBERON:0007685!2.39e-66!3;UBERON:0004134!2.39e-66!3;UBERON:0009773!6.76e-18!12;UBERON:0001231!6.76e-18!12;UBERON:0004810!6.76e-18!12;UBERON:0001225!1.21e-16!13;UBERON:0008987!1.21e-16!13;UBERON:0001851!8.02e-14!16;UBERON:0004211!8.02e-14!16;UBERON:0001285!8.02e-14!16;UBERON:0007684!8.02e-14!16;UBERON:0003220!8.02e-14!16;UBERON:0004208!8.02e-14!16;UBERON:0006555!4.22e-13!17;UBERON:0005103!4.22e-13!17;UBERON:0000083!4.22e-13!17;UBERON:0000353!4.22e-13!17;UBERON:0009201!4.22e-13!17;UBERON:0004819!4.22e-13!17;UBERON:0006553!4.22e-13!17;UBERON:0003074!4.22e-13!17;UBERON:0003060!4.22e-13!17;UBERON:0000080!1.85e-12!18;UBERON:0002120!1.85e-12!18;UBERON:0004875!1.85e-12!18;UBERON:0005721!1.85e-12!18;UBERON:0005754!1.85e-12!18;UBERON:0007297!1.85e-12!18;UBERON:0004876!2.29e-11!20;UBERON:0003887!6.74e-11!21;UBERON:0000058!4.34e-09!26;UBERON:0002113!8.32e-09!27;UBERON:0003918!8.32e-09!27;UBERON:0005095!8.32e-09!27;UBERON:0007687!8.32e-09!27;UBERON:0000489!1.18e-07!32;UBERON:0003064!8.21e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0006853;2.39e-66;3!UBERON:0007685;2.39e-66;3!UBERON:0004134;2.39e-66;3!UBERON:0004211;3.81e-21;10!UBERON:0009773;3.81e-21;10!UBERON:0001231;3.81e-21;10!UBERON:0004810;3.81e-21;10!UBERON:0001225;6.76e-18;12!UBERON:0008987;6.76e-18;12!UBERON:0001851;1.22e-14;15!UBERON:0006555;1.22e-14;15!UBERON:0000353;1.22e-14;15!UBERON:0004819;1.22e-14;15!UBERON:0001285;1.22e-14;15!UBERON:0007684;1.22e-14;15!UBERON:0002113;1.01e-09;24!UBERON:0011143;1.01e-09;24!UBERON:0000489;2.67e-08;29!UBERON:0006554;4.53e-08;30!UBERON:0001008;4.53e-08;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,2.39e-66,3;UBERON:0007685,2.39e-66,3;UBERON:0004134,2.39e-66,3;UBERON:0004810,3.81e-21,10;UBERON:0001225,6.76e-18,12;UBERON:0008987,6.76e-18,12;UBERON:0001851,1.22e-14,15;UBERON:0004211,1.22e-14,15;UBERON:0009773,1.22e-14,15;UBERON:0000353,1.22e-14,15;UBERON:0001231,1.22e-14,15;UBERON:0001285,1.22e-14,15;UBERON:0007684,1.22e-14,15;UBERON:0004208,1.22e-14,15;UBERON:0006555,8.02e-14,16;UBERON:0004819,8.02e-14,16;UBERON:0002113,4.34e-09,26;UBERON:0003918,4.34e-09,26;UBERON:0011143,4.34e-09,26;UBERON:0005095,4.34e-09,26;UBERON:0007687,4.34e-09,26;UBERON:0000489,7.41e-08,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.14183609821597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.14183609821597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:62055187..62055188,+ | |short_description=p@chr16:62055187..62055188,+ | ||
}} | }} |
Latest revision as of 10:56, 25 July 2015
Short description: | p@chr16:62055187..62055188, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:62055187..62055188, + |
Coexpression cluster: | C1044_Renal_amniotic_Mammary_chorionic_bile_prostate_Amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.39e-66 | 3 |
kidney cortex tubule cell | 2.39e-66 | 3 |
epithelial cell of proximal tubule | 2.39e-66 | 3 |
kidney tubule cell | 3.81e-21 | 10 |
nephron tubule epithelial cell | 3.81e-21 | 10 |
kidney cortical cell | 6.76e-18 | 12 |
renal cortical epithelial cell | 6.76e-18 | 12 |
epithelial cell of nephron | 1.22e-14 | 15 |
kidney cell | 4.22e-13 | 17 |
kidney epithelial cell | 4.22e-13 | 17 |
columnar/cuboidal epithelial cell | 8.32e-09 | 27 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 2.39e-66 | 3 |
region of nephron tubule | 2.39e-66 | 3 |
proximal tubule | 2.39e-66 | 3 |
nephron tubule epithelium | 3.81e-21 | 10 |
cortex of kidney | 6.76e-18 | 12 |
renal parenchyma | 6.76e-18 | 12 |
cortex | 1.22e-14 | 15 |
nephron epithelium | 1.22e-14 | 15 |
renal tubule | 1.22e-14 | 15 |
parenchyma | 1.22e-14 | 15 |
nephron tubule | 1.22e-14 | 15 |
nephron | 1.22e-14 | 15 |
uriniferous tubule | 1.22e-14 | 15 |
nephrogenic mesenchyme | 1.22e-14 | 15 |
excretory tube | 8.02e-14 | 16 |
kidney epithelium | 8.02e-14 | 16 |
kidney | 4.34e-09 | 26 |
kidney mesenchyme | 4.34e-09 | 26 |
upper urinary tract | 4.34e-09 | 26 |
kidney rudiment | 4.34e-09 | 26 |
kidney field | 4.34e-09 | 26 |
cavitated compound organ | 7.41e-08 | 31 |