FFCP PHASE1:Hg19::chr16:66413317..66413328,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:66413317..66413328,+ to FFCP PHASE1:Hg19::chr16:66413317..66413328,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=76bp_to_AB385138_5end | |||
|cluster_id=chr16:66413317..66413328,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_AB385138_5end | |||
|id=chr16:66413317..66413328,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.10e-42!24;CL:0000115!2.21e-41!35;CL:0002078!5.95e-31!44;CL:0000071!8.78e-31!18;CL:0002546!8.78e-31!18;CL:0000213!8.91e-22!57;CL:0000215!8.91e-22!57;CL:1000413!2.81e-18!9;CL:0002544!6.79e-13!6;CL:0005020!9.34e-13!6;CL:0002138!9.34e-13!6;CL:0005022!9.34e-13!6;CL:0002543!8.32e-09!6;CL:0000222!3.10e-08!119;CL:0002144!3.13e-07!3;CL:0002618!5.16e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.14e-87;36!CL:0002139;7.28e-84;24!CL:0000071;6.85e-50;18!CL:0002078;1.69e-49;45!CL:0002138;3.41e-38;6!CL:1000413;8.10e-35;9!CL:0000213;2.04e-31;58!CL:0000215;2.04e-31;58!CL:0002544;8.10e-27;6!CL:0002188;8.33e-22;5!CL:1000746;1.24e-15;7!CL:1000612;1.24e-15;7!CL:0002545;3.21e-14;2!CL:0002262;4.18e-14;2!CL:1000398;4.18e-14;2!CL:0002543;3.12e-10;6!CL:0002144;6.54e-10;3!CL:0002618;2.40e-09;3!CL:0002681;3.61e-09;12!CL:0002584;3.61e-09;12!CL:0000076;7.72e-09;63!CL:1000449;2.38e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,9.53e-100,36;CL:0002139,8.11e-84,24;CL:0002078,6.41e-79,45;CL:0000213,3.10e-60,58;CL:0000215,3.10e-60,58;CL:0000071,3.44e-50,18;CL:0002546,3.44e-50,18;CL:0005020,1.10e-37,6;CL:0002138,1.10e-37,6;CL:0005022,1.10e-37,6;CL:1000413,4.65e-35,9;CL:0002544,4.73e-27,6;CL:0000222,1.68e-26,121;CL:0002188,7.92e-22,5;CL:1000746,1.20e-15,7;CL:1000612,1.20e-15,7;CL:0002545,2.63e-14,2;CL:0002262,4.47e-14,2;CL:1000398,4.47e-14,2;CL:0000076,1.00e-12,63;CL:0002321,2.73e-10,250;CL:0002543,2.75e-10,6;CL:0000066,3.13e-10,253;CL:0002144,6.27e-10,3;CL:0002618,1.94e-09,3;CL:0002681,3.54e-09,12;CL:0002584,3.54e-09,12;CL:1000449,2.35e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;6.85e-50;18!CL:0005022;3.41e-38;6!CL:0000222;2.56e-11;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!8.78e-31!18;UBERON:0004638!8.78e-31!18;UBERON:0004852!8.78e-31!18;UBERON:0000055!3.43e-25!69;UBERON:0000487!3.49e-24!22;UBERON:0002049!2.16e-23!79;UBERON:0007798!2.16e-23!79;UBERON:0004111!1.41e-21!241;UBERON:0006914!1.24e-20!25;UBERON:0000477!1.33e-20!286;UBERON:0001981!4.77e-19!60;UBERON:0007500!4.77e-19!60;UBERON:0004537!4.77e-19!60;UBERON:0006965!4.77e-19!60;UBERON:0001009!1.91e-18!113;UBERON:0000025!2.55e-18!194;UBERON:0003915!2.81e-18!9;UBERON:0004700!2.81e-18!9;UBERON:0001917!2.81e-18!9;UBERON:0004872!3.76e-18!84;UBERON:0004535!3.89e-18!110;UBERON:0007023!2.72e-17!115;UBERON:0003914!3.75e-17!118;UBERON:0002465!6.04e-12!10;UBERON:0001473!2.63e-09!8;UBERON:0004536!2.63e-09!8;UBERON:0006558!2.63e-09!8;UBERON:0000119!2.79e-09!312;UBERON:0000483!5.52e-09!309;UBERON:0001638!7.16e-08!9;UBERON:0003920!7.16e-08!9;UBERON:0004582!7.16e-08!9;UBERON:0000947!1.08e-07!21;UBERON:0010191!1.08e-07!21;UBERON:0001915!3.13e-07!3;UBERON:0001982!3.13e-07!3;UBERON:0003978!9.11e-07!3;UBERON:0009751!9.11e-07!3;UBERON:0000946!9.11e-07!3;UBERON:0002523!9.11e-07!3;UBERON:0005983!9.11e-07!3;UBERON:0002165!9.11e-07!3;UBERON:0002062!9.11e-07!3;UBERON:0007280!9.11e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.85e-50;18!UBERON:0001986;6.85e-50;18!UBERON:0004852;6.85e-50;18!UBERON:0000487;2.03e-40;22!UBERON:0006914;2.65e-35;25!UBERON:0003915;8.10e-35;9!UBERON:0004700;8.10e-35;9!UBERON:0001917;8.10e-35;9!UBERON:0001473;1.50e-28;8!UBERON:0004536;1.50e-28;8!UBERON:0006558;1.50e-28;8!UBERON:0000490;5.42e-24;33!UBERON:0000055;1.98e-23;65!UBERON:0002465;9.36e-23;10!UBERON:0000074;1.24e-15;7!UBERON:0001229;1.24e-15;7!UBERON:0000353;1.61e-15;15!UBERON:0005800;3.21e-14;2!UBERON:0001515;3.21e-14;2!UBERON:0001281;4.18e-14;2!UBERON:0003497;4.18e-14;2!UBERON:0003909;4.18e-14;2!UBERON:0003835;4.18e-14;2!UBERON:0007500;4.55e-13;56!UBERON:0001981;4.55e-13;56!UBERON:0004537;4.55e-13;56!UBERON:0002049;5.38e-13;75!UBERON:0007798;5.38e-13;75!UBERON:0003914;1.34e-12;74!UBERON:0010523;6.54e-10;3!UBERON:0001915;6.54e-10;3!UBERON:0001982;6.54e-10;3!UBERON:0001280;1.06e-09;3!UBERON:0004647;1.06e-09;3!UBERON:0001225;3.61e-09;12!UBERON:0008987;3.61e-09;12!UBERON:0001009;4.27e-09;112!UBERON:0002405;4.16e-08;27!UBERON:0000025;5.41e-08;93!UBERON:0004535;5.81e-08;109!UBERON:0007029;6.10e-08;1!UBERON:0002134;1.26e-07;1!UBERON:0005208;1.26e-07;1!UBERON:0004145;1.26e-07;1!UBERON:0005946;1.26e-07;1!UBERON:0005965;1.26e-07;1!UBERON:0002078;1.26e-07;1!UBERON:0000947;1.56e-07;21!UBERON:0010191;1.56e-07;21!UBERON:0004111;2.28e-07;130!UBERON:0001851;2.38e-07;15!UBERON:0006555;2.38e-07;15!UBERON:0004819;2.38e-07;15!UBERON:0001285;2.38e-07;15!UBERON:0007684;2.38e-07;15!UBERON:0001638;5.66e-07;9!UBERON:0003920;5.66e-07;9!UBERON:0004582;5.66e-07;9!UBERON:0001637;6.64e-07;42!UBERON:0003509;6.64e-07;42!UBERON:0004572;6.64e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.44e-50,18;UBERON:0001986,3.44e-50,18;UBERON:0004852,3.44e-50,18;UBERON:0000487,1.16e-40,22;UBERON:0000055,7.54e-38,68;UBERON:0006914,1.62e-35,25;UBERON:0003915,4.65e-35,9;UBERON:0004700,4.65e-35,9;UBERON:0001917,4.65e-35,9;UBERON:0002049,1.82e-32,78;UBERON:0007798,1.82e-32,78;UBERON:0001473,3.59e-28,8;UBERON:0004536,3.59e-28,8;UBERON:0006558,3.59e-28,8;UBERON:0004535,1.89e-24,109;UBERON:0001009,1.12e-23,112;UBERON:0002465,1.87e-22,10;UBERON:0007500,6.67e-22,59;UBERON:0001981,6.67e-22,59;UBERON:0004537,6.67e-22,59;UBERON:0006965,6.67e-22,59;UBERON:0003914,2.00e-18,117;UBERON:0004872,6.74e-17,83;UBERON:0010532,1.20e-15,7;UBERON:0000074,1.20e-15,7;UBERON:0001229,1.20e-15,7;UBERON:0001230,1.20e-15,7;UBERON:0003220,1.20e-15,7;UBERON:0005749,1.20e-15,7;UBERON:0004199,1.20e-15,7;UBERON:0004209,1.20e-15,7;UBERON:0004198,1.20e-15,7;UBERON:0000353,1.62e-15,15;UBERON:0004111,8.57e-15,240;UBERON:0005800,2.63e-14,2;UBERON:0001515,2.63e-14,2;UBERON:0001281,4.47e-14,2;UBERON:0003497,4.47e-14,2;UBERON:0003909,4.47e-14,2;UBERON:0003835,4.47e-14,2;UBERON:0005103,1.04e-13,8;UBERON:0000083,1.04e-13,8;UBERON:0009201,1.04e-13,8;UBERON:0006553,1.04e-13,8;UBERON:0003074,1.04e-13,8;UBERON:0003060,1.04e-13,8;UBERON:0000080,3.34e-12,9;UBERON:0002120,3.34e-12,9;UBERON:0004875,3.34e-12,9;UBERON:0005721,3.34e-12,9;UBERON:0005754,3.34e-12,9;UBERON:0007297,3.34e-12,9;UBERON:0000058,3.88e-12,19;UBERON:0000025,8.77e-11,192;UBERON:0004876,5.28e-10,11;UBERON:0010523,6.27e-10,3;UBERON:0001915,6.27e-10,3;UBERON:0001982,6.27e-10,3;UBERON:0001280,1.11e-09,3;UBERON:0004647,1.11e-09,3;UBERON:0005171,1.11e-09,3;UBERON:0001225,3.54e-09,12;UBERON:0008987,3.54e-09,12;UBERON:0003887,3.54e-09,12;UBERON:0003081,7.59e-09,203;UBERON:0007029,6.52e-08,1;UBERON:0002134,1.18e-07,1;UBERON:0005208,1.18e-07,1;UBERON:0005946,1.18e-07,1;UBERON:0005965,1.18e-07,1;UBERON:0002078,1.18e-07,1;UBERON:0000947,1.35e-07,21;UBERON:0010191,1.35e-07,21;UBERON:0001851,2.35e-07,15;UBERON:0004211,2.35e-07,15;UBERON:0009773,2.35e-07,15;UBERON:0001231,2.35e-07,15;UBERON:0001285,2.35e-07,15;UBERON:0007684,2.35e-07,15;UBERON:0004208,2.35e-07,15;UBERON:0001638,5.21e-07,9;UBERON:0003920,5.21e-07,9;UBERON:0004582,5.21e-07,9;UBERON:0000490,6.17e-07,148;UBERON:0006555,6.71e-07,16;UBERON:0004819,6.71e-07,16;UBERON:0001637,7.48e-07,42;UBERON:0003509,7.48e-07,42;UBERON:0004572,7.48e-07,42;UBERON:0000483,9.50e-07,306 | |||
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|short_description=p1@AB385138 | |||
}} | }} |
Latest revision as of 11:01, 25 July 2015
Short description: | p1@AB385138 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB385138_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 76bp_to_AB385138_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 9.53e-100 | 36 |
endothelial cell of vascular tree | 8.11e-84 | 24 |
meso-epithelial cell | 6.41e-79 | 45 |
lining cell | 3.10e-60 | 58 |
barrier cell | 3.10e-60 | 58 |
blood vessel endothelial cell | 3.44e-50 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.44e-50 | 18 |
lymphangioblast | 1.10e-37 | 6 |
endothelial cell of lymphatic vessel | 1.10e-37 | 6 |
vascular lymphangioblast | 1.10e-37 | 6 |
endothelial cell of artery | 4.65e-35 | 9 |
aortic endothelial cell | 4.73e-27 | 6 |
mesodermal cell | 1.68e-26 | 121 |
glomerular endothelial cell | 7.92e-22 | 5 |
glomerular cell | 1.20e-15 | 7 |
kidney corpuscule cell | 1.20e-15 | 7 |
thoracic aorta endothelial cell | 2.63e-14 | 2 |
endothelial cell of sinusoid | 4.47e-14 | 2 |
endothelial cell of hepatic sinusoid | 4.47e-14 | 2 |
squamous epithelial cell | 1.00e-12 | 63 |
embryonic cell | 2.73e-10 | 250 |
vein endothelial cell | 2.75e-10 | 6 |
epithelial cell | 3.13e-10 | 253 |
capillary endothelial cell | 6.27e-10 | 3 |
endothelial cell of umbilical vein | 1.94e-09 | 3 |
kidney cortical cell | 3.54e-09 | 12 |
renal cortical epithelial cell | 3.54e-09 | 12 |
epithelial cell of nephron | 2.35e-07 | 15 |