FFCP PHASE1:Hg19::chr17:17589437..17589442,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:17589437..17589442,+ | |||
|description=CAGE_peak_at_chr17:17589437..17589442,+ | |description=CAGE_peak_at_chr17:17589437..17589442,+ | ||
|id=chr17:17589437..17589442,+ | |id=chr17:17589437..17589442,+ | ||
|ontology_enrichment_celltype=CL:1000746;1.47e-16;7!CL:1000612;1.47e-16;7!CL:0000167;9.12e-14;1!CL:0000164;9.12e-14;1!CL:0000502;9.12e-14;1!CL:0000172;9.12e-14;1!CL:0000173;9.12e-14;1!CL:0000244;1.38e-13;4!CL:0000731;1.38e-13;4!CL:1000497;5.92e-12;17!CL:0002518;5.92e-12;17!CL:0002188;6.79e-11;5!CL:0002681;6.57e-10;12!CL:0002584;6.57e-10;12!CL:1000449;4.94e-08;15!CL:0000650;1.59e-07;2!CL:1000500;1.59e-07;2!CL:1000618;1.59e-07;2!CL:1001318;1.59e-07;2!CL:0002173;1.59e-07;2 | |ontology_enrichment_celltype=CL:0000066!1.64e-26!254;CL:0002076!3.55e-08!43;CL:0000163!1.33e-07!9;CL:0000076!1.58e-07!62;CL:0000223!3.69e-07!59;CL:1000497!4.30e-07!18;CL:0002518!4.30e-07!18 | ||
| | |ontology_enrichment_celltype_v019=CL:1000746;1.47e-16;7!CL:1000612;1.47e-16;7!CL:0000167;9.12e-14;1!CL:0000164;9.12e-14;1!CL:0000502;9.12e-14;1!CL:0000172;9.12e-14;1!CL:0000173;9.12e-14;1!CL:0000244;1.38e-13;4!CL:0000731;1.38e-13;4!CL:1000497;5.92e-12;17!CL:0002518;5.92e-12;17!CL:0002188;6.79e-11;5!CL:0002681;6.57e-10;12!CL:0002584;6.57e-10;12!CL:1000449;4.94e-08;15!CL:0000650;1.59e-07;2!CL:1000500;1.59e-07;2!CL:1000618;1.59e-07;2!CL:1001318;1.59e-07;2!CL:0002173;1.59e-07;2 | ||
|ontology_enrichment_disease=DOID:4430;9.12e-14;1!DOID:3910;9.24e-08;2!DOID:4074;1.59e-07;2!DOID:4905;1.59e-07;2!DOID:3498;1.59e-07;2 | |ontology_enrichment_celltype_v019_2=CL:1000746,1.04e-16,7;CL:1000612,1.04e-16,7;CL:0000244,9.15e-14,4;CL:0000731,9.15e-14,4;CL:0000167,9.73e-14,1;CL:0000164,9.73e-14,1;CL:0000502,9.73e-14,1;CL:0000172,9.73e-14,1;CL:0000173,9.73e-14,1;CL:0002351,9.73e-14,1;CL:1000497,4.72e-12,17;CL:0002518,4.72e-12,17;CL:0002188,6.47e-11,5;CL:0002681,5.39e-10,12;CL:0002584,5.39e-10,12;CL:1000449,4.22e-08,15;CL:0000650,1.12e-07,2;CL:1000500,1.12e-07,2;CL:1000618,1.12e-07,2;CL:1001318,1.12e-07,2;CL:0002173,1.12e-07,2 | ||
|ontology_enrichment_uberon=UBERON:0000074;1.47e-16;7!UBERON:0001229;1.47e-16;7!UBERON:0006554;1.20e-14;30!UBERON:0001008;1.20e-14;30!UBERON:0000365;4.66e-11;5!UBERON:0001225;6.57e-10;12!UBERON:0008987;6.57e-10;12!UBERON:0005910;2.30e-09;6!UBERON:0002113;1.56e-08;24!UBERON:0011143;1.56e-08;24!UBERON:0001851;4.94e-08;15!UBERON:0006555;4.94e-08;15!UBERON:0000353;4.94e-08;15!UBERON:0004819;4.94e-08;15!UBERON:0001285;4.94e-08;15!UBERON:0007684;4.94e-08;15!UBERON:0004903;9.24e-08;2!UBERON:0002173;9.24e-08;2!UBERON:0002186;9.24e-08;2!UBERON:0003567;1.59e-07;2!UBERON:0003838;1.59e-07;2!UBERON:0003586;1.59e-07;2!UBERON:0005169;1.59e-07;2!UBERON:0002321;1.59e-07;2!UBERON:0005215;1.59e-07;2!UBERON:0002303;1.59e-07;2!UBERON:0002319;1.59e-07;2!UBERON:0000489;4.28e-07;29 | |ontology_enrichment_development_v019=CL:0002351;9.12e-14;1 | ||
|ontology_enrichment_disease=DOID:305!4.51e-19!106;DOID:0050687!4.53e-16!143;DOID:162!1.53e-08!235;DOID:14566!5.14e-08!239;DOID:1749!1.80e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4430;9.12e-14;1!DOID:3910;9.24e-08;2!DOID:4074;1.59e-07;2!DOID:4905;1.59e-07;2!DOID:3498;1.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,9.73e-14,1;DOID:3910,9.25e-08,2;DOID:4074,1.36e-07,2;DOID:4905,1.36e-07,2;DOID:3498,1.36e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0006554!1.62e-10!44;UBERON:0001008!3.95e-10!45;UBERON:0004119!9.07e-10!169;UBERON:0000925!9.07e-10!169;UBERON:0006595!9.07e-10!169;UBERON:0001851!4.10e-07!16;UBERON:0000065!4.52e-07!53;UBERON:0000058!5.31e-07!26;UBERON:0005911!8.03e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.47e-16;7!UBERON:0001229;1.47e-16;7!UBERON:0006554;1.20e-14;30!UBERON:0001008;1.20e-14;30!UBERON:0000365;4.66e-11;5!UBERON:0001225;6.57e-10;12!UBERON:0008987;6.57e-10;12!UBERON:0005910;2.30e-09;6!UBERON:0002113;1.56e-08;24!UBERON:0011143;1.56e-08;24!UBERON:0001851;4.94e-08;15!UBERON:0006555;4.94e-08;15!UBERON:0000353;4.94e-08;15!UBERON:0004819;4.94e-08;15!UBERON:0001285;4.94e-08;15!UBERON:0007684;4.94e-08;15!UBERON:0004903;9.24e-08;2!UBERON:0002173;9.24e-08;2!UBERON:0002186;9.24e-08;2!UBERON:0003567;1.59e-07;2!UBERON:0003838;1.59e-07;2!UBERON:0003586;1.59e-07;2!UBERON:0005169;1.59e-07;2!UBERON:0002321;1.59e-07;2!UBERON:0005215;1.59e-07;2!UBERON:0002303;1.59e-07;2!UBERON:0002319;1.59e-07;2!UBERON:0000489;4.28e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,1.04e-16,7;UBERON:0000074,1.04e-16,7;UBERON:0001229,1.04e-16,7;UBERON:0001230,1.04e-16,7;UBERON:0003220,1.04e-16,7;UBERON:0005749,1.04e-16,7;UBERON:0004199,1.04e-16,7;UBERON:0004209,1.04e-16,7;UBERON:0004198,1.04e-16,7;UBERON:0005103,1.06e-14,8;UBERON:0000083,1.06e-14,8;UBERON:0009201,1.06e-14,8;UBERON:0006553,1.06e-14,8;UBERON:0003074,1.06e-14,8;UBERON:0003060,1.06e-14,8;UBERON:0000080,3.90e-13,9;UBERON:0002120,3.90e-13,9;UBERON:0004875,3.90e-13,9;UBERON:0005721,3.90e-13,9;UBERON:0005754,3.90e-13,9;UBERON:0007297,3.90e-13,9;UBERON:0000365,3.36e-11,5;UBERON:0000058,6.89e-11,19;UBERON:0004876,7.47e-11,11;UBERON:0001225,5.39e-10,12;UBERON:0008987,5.39e-10,12;UBERON:0003887,5.39e-10,12;UBERON:0005910,1.75e-09,6;UBERON:0006554,2.51e-09,47;UBERON:0001008,4.00e-09,48;UBERON:0001851,4.22e-08,15;UBERON:0004211,4.22e-08,15;UBERON:0009773,4.22e-08,15;UBERON:0000353,4.22e-08,15;UBERON:0001231,4.22e-08,15;UBERON:0001285,4.22e-08,15;UBERON:0007684,4.22e-08,15;UBERON:0004208,4.22e-08,15;UBERON:0002113,5.89e-08,26;UBERON:0003918,5.89e-08,26;UBERON:0011143,5.89e-08,26;UBERON:0005095,5.89e-08,26;UBERON:0007687,5.89e-08,26;UBERON:0004903,9.25e-08,2;UBERON:0002173,9.25e-08,2;UBERON:0002186,9.25e-08,2;UBERON:0003567,1.12e-07,2;UBERON:0003838,1.12e-07,2;UBERON:0003586,1.12e-07,2;UBERON:0005169,1.12e-07,2;UBERON:0002321,1.12e-07,2;UBERON:0005215,1.12e-07,2;UBERON:0002303,1.12e-07,2;UBERON:0002319,1.12e-07,2;UBERON:0006555,1.26e-07,16;UBERON:0004819,1.26e-07,16 | |||
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| ||
|short_description=p@chr17:17589437..17589442,+ | |short_description=p@chr17:17589437..17589442,+ | ||
}} | }} |
Latest revision as of 14:21, 25 July 2015
Short description: | p@chr17:17589437..17589442, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:17589437..17589442, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 1.04e-16 | 7 |
kidney corpuscule cell | 1.04e-16 | 7 |
transitional epithelial cell | 9.15e-14 | 4 |
urothelial cell | 9.15e-14 | 4 |
peptide hormone secreting cell | 9.73e-14 | 1 |
enteroendocrine cell | 9.73e-14 | 1 |
type D enteroendocrine cell | 9.73e-14 | 1 |
somatostatin secreting cell | 9.73e-14 | 1 |
pancreatic D cell | 9.73e-14 | 1 |
progenitor cell of endocrine pancreas | 9.73e-14 | 1 |
kidney cell | 4.72e-12 | 17 |
kidney epithelial cell | 4.72e-12 | 17 |
glomerular endothelial cell | 6.47e-11 | 5 |
kidney cortical cell | 5.39e-10 | 12 |
renal cortical epithelial cell | 5.39e-10 | 12 |
epithelial cell of nephron | 4.22e-08 | 15 |
mesangial cell | 1.12e-07 | 2 |
kidney interstitial cell | 1.12e-07 | 2 |
juxtaglomerular complex cell | 1.12e-07 | 2 |
renal interstitial pericyte | 1.12e-07 | 2 |
extraglomerular mesangial cell | 1.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.73e-14 | 1 |
lung adenocarcinoma | 9.25e-08 | 2 |
pancreas adenocarcinoma | 1.36e-07 | 2 |
pancreatic carcinoma | 1.36e-07 | 2 |
pancreatic ductal adenocarcinoma | 1.36e-07 | 2 |