FFCP PHASE1:Hg19::chr17:25424113..25424116,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:25424113..25424116,+ | |||
|description=CAGE_peak_at_chr17:25424113..25424116,+ | |description=CAGE_peak_at_chr17:25424113..25424116,+ | ||
|id=chr17:25424113..25424116,+ | |id=chr17:25424113..25424116,+ | ||
|ontology_enrichment_celltype=CL:0002178!5.79e-13!3;CL:0000054!5.31e-09!2;CL:0000137!5.31e-09!2;CL:0000092!5.31e-09!2 | |ontology_enrichment_celltype=CL:0002178!5.79e-13!3;CL:0000054!5.31e-09!2;CL:0000137!5.31e-09!2;CL:0000092!5.31e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002178;4.84e-19;3!CL:0000054;7.27e-08;2!CL:0000137;7.27e-08;2!CL:0000092;7.27e-08;2 | |ontology_enrichment_celltype_v019=CL:0002178;4.84e-19;3!CL:0000054;7.27e-08;2!CL:0000137;7.27e-08;2!CL:0000092;7.27e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,4.62e-19,3;CL:0000054,6.58e-08,2;CL:0000137,6.58e-08,2;CL:0000092,6.58e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.97e-14;1 | |ontology_enrichment_development_v019=UBERON:0005425;1.97e-14;1 | ||
|ontology_enrichment_disease=DOID:162!2.12e-17!235;DOID:14566!7.55e-17!239;DOID:0050687!5.32e-16!143;DOID:1036!4.50e-12!8;DOID:1325!1.68e-09!7;DOID:3904!1.68e-09!7;DOID:0050686!2.77e-09!137;DOID:200!5.31e-09!2;DOID:4305!5.31e-09!2;DOID:305!7.91e-09!106;DOID:0050615!1.52e-08!16;DOID:3119!6.68e-07!14;DOID:299!7.61e-07!25 | |ontology_enrichment_disease=DOID:162!2.12e-17!235;DOID:14566!7.55e-17!239;DOID:0050687!5.32e-16!143;DOID:1036!4.50e-12!8;DOID:1325!1.68e-09!7;DOID:3904!1.68e-09!7;DOID:0050686!2.77e-09!137;DOID:200!5.31e-09!2;DOID:4305!5.31e-09!2;DOID:305!7.91e-09!106;DOID:0050615!1.52e-08!16;DOID:3119!6.68e-07!14;DOID:299!7.61e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:0060085;1.97e-14;1!DOID:0050619;1.97e-14;1!DOID:3165;1.97e-14;1!DOID:0060121;1.97e-14;1!DOID:2438;1.97e-14;1!DOID:4418;1.97e-14;1!DOID:1357;1.97e-14;1!DOID:1325;1.27e-08;7!DOID:3904;1.27e-08;7!DOID:3493;3.82e-08;2!DOID:0050615;4.43e-08;16!DOID:3910;4.53e-08;2!DOID:200;7.27e-08;2!DOID:4305;7.27e-08;2!DOID:1036;1.49e-07;8!DOID:3905;6.79e-07;9 | |ontology_enrichment_disease_v019=DOID:0060085;1.97e-14;1!DOID:0050619;1.97e-14;1!DOID:3165;1.97e-14;1!DOID:0060121;1.97e-14;1!DOID:2438;1.97e-14;1!DOID:4418;1.97e-14;1!DOID:1357;1.97e-14;1!DOID:1325;1.27e-08;7!DOID:3904;1.27e-08;7!DOID:3493;3.82e-08;2!DOID:0050615;4.43e-08;16!DOID:3910;4.53e-08;2!DOID:200;7.27e-08;2!DOID:4305;7.27e-08;2!DOID:1036;1.49e-07;8!DOID:3905;6.79e-07;9 | ||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.61e-14,1;DOID:3165,1.61e-14,1;DOID:0060121,1.61e-14,1;DOID:2438,1.61e-14,1;DOID:4418,1.61e-14,1;DOID:0050619,3.15e-14,1;DOID:1357,3.15e-14,1;DOID:162,1.74e-09,235;DOID:14566,2.96e-09,239;DOID:1325,1.27e-08,7;DOID:3904,1.27e-08,7;DOID:0050687,3.35e-08,143;DOID:3493,3.82e-08,2;DOID:3910,4.69e-08,2;DOID:0050615,4.82e-08,16;DOID:200,6.58e-08,2;DOID:4305,6.58e-08,2;DOID:1036,1.60e-07,8;DOID:3905,6.79e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000945!4.81e-08!8;UBERON:0010039!4.81e-08!8 | |ontology_enrichment_uberon=UBERON:0000945!4.81e-08!8;UBERON:0010039!4.81e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.97e-14;1!UBERON:0001764;1.97e-14;1!UBERON:0001785;1.97e-14;1!UBERON:0002464;1.97e-14;1!UBERON:0004904;1.97e-14;1!UBERON:0001825;1.97e-14;1!UBERON:0001021;1.97e-14;1!UBERON:0000945;8.09e-12;5!UBERON:0010039;8.09e-12;5!UBERON:0004903;4.53e-08;2!UBERON:0002173;4.53e-08;2!UBERON:0002186;4.53e-08;2!UBERON:0003714;7.27e-08;2!UBERON:0005162;7.27e-08;2!UBERON:0000122;7.27e-08;2!UBERON:0000010;9.64e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0000941;1.97e-14;1!UBERON:0001764;1.97e-14;1!UBERON:0001785;1.97e-14;1!UBERON:0002464;1.97e-14;1!UBERON:0004904;1.97e-14;1!UBERON:0001825;1.97e-14;1!UBERON:0001021;1.97e-14;1!UBERON:0000945;8.09e-12;5!UBERON:0010039;8.09e-12;5!UBERON:0004903;4.53e-08;2!UBERON:0002173;4.53e-08;2!UBERON:0002186;4.53e-08;2!UBERON:0003714;7.27e-08;2!UBERON:0005162;7.27e-08;2!UBERON:0000122;7.27e-08;2!UBERON:0000010;9.64e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.84e-14,1;UBERON:0001785,1.84e-14,1;UBERON:0002464,1.84e-14,1;UBERON:0004904,1.84e-14,1;UBERON:0001021,1.84e-14,1;UBERON:0003902,1.84e-14,1;UBERON:0005425,1.84e-14,1;UBERON:0001764,3.15e-14,1;UBERON:0001825,3.15e-14,1;UBERON:0004903,4.69e-08,2;UBERON:0002173,4.69e-08,2;UBERON:0002186,4.69e-08,2;UBERON:0003714,7.03e-08,2;UBERON:0005162,7.03e-08,2;UBERON:0000122,7.03e-08,2;UBERON:0000945,1.00e-07,8;UBERON:0010039,1.00e-07,8;UBERON:0000010,8.84e-07,8 | |||
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| ||
|short_description=p@chr17:25424113..25424116,+ | |short_description=p@chr17:25424113..25424116,+ | ||
}} | }} |
Latest revision as of 14:49, 25 July 2015
Short description: | p@chr17:25424113..25424116, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:25424113..25424116, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 4.62e-19 | 3 |
bone matrix secreting cell | 6.58e-08 | 2 |
osteocyte | 6.58e-08 | 2 |
osteoclast | 6.58e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.84e-14 | 1 |
cranial nerve | 1.84e-14 | 1 |
nerve trunk | 1.84e-14 | 1 |
nerve connecting eye with brain | 1.84e-14 | 1 |
nerve | 1.84e-14 | 1 |
retinal neural layer | 1.84e-14 | 1 |
presumptive neural retina | 1.84e-14 | 1 |
maxillary sinus | 3.15e-14 | 1 |
paranasal sinus | 3.15e-14 | 1 |
bronchoalveolar duct junction | 4.69e-08 | 2 |
alveolar duct | 4.69e-08 | 2 |
bronchiole | 4.69e-08 | 2 |
neural tissue | 7.03e-08 | 2 |
multi cell component structure | 7.03e-08 | 2 |
neuron projection bundle | 7.03e-08 | 2 |
stomach | 1.00e-07 | 8 |
food storage organ | 1.00e-07 | 8 |
peripheral nervous system | 8.84e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.61e-14 | 1 |
skin benign neoplasm | 1.61e-14 | 1 |
integumentary system benign neoplasm | 1.61e-14 | 1 |
dermis tumor | 1.61e-14 | 1 |
cutaneous fibrous histiocytoma | 1.61e-14 | 1 |
paranasal sinus cancer | 3.15e-14 | 1 |
maxillary sinus cancer | 3.15e-14 | 1 |
cancer | 1.74e-09 | 235 |
disease of cellular proliferation | 2.96e-09 | 239 |
bronchus cancer | 1.27e-08 | 7 |
bronchogenic carcinoma | 1.27e-08 | 7 |
cell type cancer | 3.35e-08 | 143 |
signet ring cell adenocarcinoma | 3.82e-08 | 2 |
lung adenocarcinoma | 4.69e-08 | 2 |
respiratory system cancer | 4.82e-08 | 16 |
giant cell tumor | 6.58e-08 | 2 |
bone giant cell tumor | 6.58e-08 | 2 |
chronic leukemia | 1.60e-07 | 8 |
lung carcinoma | 6.79e-07 | 9 |