FFCP PHASE1:Hg19::chr17:6946298..6946321,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:6946298..6946321,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_at_chr17:6946298..6946321,- | |||
|id=chr17:6946298..6946321,- | |||
|ontology_enrichment_celltype=CL:0002322!6.72e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002618;1.23e-18;3!CL:0002575;2.18e-13;2!CL:0002188;5.97e-12;5!CL:0002322;2.10e-11;5!CL:0000115;1.76e-10;36!CL:0002543;1.38e-09;6!CL:1000746;1.15e-08;7!CL:1000612;1.15e-08;7!CL:0000669;4.09e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,3.79e-18,3;CL:0002575,4.89e-13,2;CL:0000115,3.25e-12,36;CL:0002188,4.99e-12,5;CL:0002322,2.48e-11,5;CL:0002078,1.75e-09,45;CL:0002543,2.39e-09,6;CL:1000746,1.01e-08,7;CL:1000612,1.01e-08,7;CL:0000213,4.89e-07,58;CL:0000215,4.89e-07,58;CL:0000669,6.07e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.72e-09;3!UBERON:0003057;5.72e-09;3!UBERON:0000358;7.73e-08;1!UBERON:0010226;2.42e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.59e-24!115;UBERON:0001049!3.23e-18!57;UBERON:0005068!3.23e-18!57;UBERON:0006241!3.23e-18!57;UBERON:0007135!3.23e-18!57;UBERON:0001017!1.41e-17!82;UBERON:0005743!5.26e-17!86;UBERON:0002616!1.40e-16!59;UBERON:0000073!1.13e-14!94;UBERON:0001016!1.13e-14!94;UBERON:0002346!8.18e-14!90;UBERON:0000955!8.28e-14!69;UBERON:0006238!8.28e-14!69;UBERON:0002780!6.73e-13!41;UBERON:0001890!6.73e-13!41;UBERON:0006240!6.73e-13!41;UBERON:0003080!2.17e-12!42;UBERON:0003075!4.76e-12!86;UBERON:0007284!4.76e-12!86;UBERON:0000924!4.80e-12!173;UBERON:0006601!4.80e-12!173;UBERON:0001893!1.90e-11!34;UBERON:0002791!5.74e-11!33;UBERON:0004121!1.17e-10!169;UBERON:0002020!1.99e-10!34;UBERON:0003528!1.99e-10!34;UBERON:0000153!4.70e-10!129;UBERON:0007811!4.70e-10!129;UBERON:0001869!6.18e-10!32;UBERON:0000033!1.89e-09!123;UBERON:0009663!2.57e-08!7;UBERON:0003056!5.14e-08!61;UBERON:0002308!5.87e-08!9;UBERON:0000125!5.87e-08!9;UBERON:0002420!6.52e-08!9;UBERON:0007245!6.52e-08!9;UBERON:0010009!6.52e-08!9;UBERON:0010011!6.52e-08!9;UBERON:0000454!6.52e-08!9;UBERON:0000477!8.31e-08!286;UBERON:0003076!2.89e-07!15;UBERON:0003057!2.89e-07!15;UBERON:0004111!6.47e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;6.39e-15;4!UBERON:0000923;6.39e-15;4!UBERON:0010316;6.39e-15;4!UBERON:0005291;6.39e-15;4!UBERON:0002050;4.87e-12;5!UBERON:0005423;4.87e-12;5!UBERON:0002066;2.10e-11;5!UBERON:0002240;5.72e-09;3!UBERON:0005174;5.72e-09;3!UBERON:0001137;5.72e-09;3!UBERON:0000074;1.15e-08;7!UBERON:0001229;1.15e-08;7!UBERON:0002084;2.42e-07;1!UBERON:0001000;2.42e-07;1!UBERON:0002082;2.42e-07;1!UBERON:0005352;2.42e-07;1!UBERON:0000353;6.75e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002066,4.08e-11,5;UBERON:0002240,3.24e-09,3;UBERON:0005174,3.24e-09,3;UBERON:0001137,3.24e-09,3;UBERON:0010532,1.01e-08,7;UBERON:0000074,1.01e-08,7;UBERON:0001229,1.01e-08,7;UBERON:0001230,1.01e-08,7;UBERON:0003220,1.01e-08,7;UBERON:0005749,1.01e-08,7;UBERON:0004199,1.01e-08,7;UBERON:0004209,1.01e-08,7;UBERON:0004198,1.01e-08,7;UBERON:0000058,4.06e-08,19;UBERON:0005103,1.10e-07,8;UBERON:0000083,1.10e-07,8;UBERON:0009201,1.10e-07,8;UBERON:0006553,1.10e-07,8;UBERON:0003074,1.10e-07,8;UBERON:0003060,1.10e-07,8;UBERON:0001000,1.61e-07,1;UBERON:0005352,1.61e-07,1;UBERON:0002084,2.21e-07,1;UBERON:0002082,2.21e-07,1;UBERON:0010226,2.21e-07,1;UBERON:0000353,6.31e-07,15;UBERON:0000080,7.10e-07,9;UBERON:0002120,7.10e-07,9;UBERON:0004875,7.10e-07,9;UBERON:0005721,7.10e-07,9;UBERON:0005754,7.10e-07,9;UBERON:0007297,7.10e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0,0.434021741431704,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,1.77901850772711,0,0.400395987036012,0,1.32208974556972,0.954053754535364,2.27685187643779,0.587237189370939,0,0,0,0,0.196709770113833,0.786021525498329,0,0,0.32592226663359,0.473447805734733,0,0,0,0.221533894583621,0.541607727530031,0.128091319725675,0.390178042679635,0.164437904603676,0.276350017785848,0,0.593146252648242,0.267540828089713,0,0.113309342697566,0,0,0,0.637130828648193,0.651083453856419,0,0.301150238155546,0.639933055772092,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.868946423296794,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,1.06729878806013,0,0,0.760272105718513,0.976248230192678,0,0,1.07159673940896,1.12264686313085,1.12611480483322,0,0.949265659568129,0,0,0,0.436094052142534,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0.468642863667593,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0.272746120590835,0,0.853815942907168,0.662648841607426,1.04574548582567,1.14027160516907,1.7662459561294,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0,0.185176890317059,0,0,0,0,0,0.433099343283221,1.38895653772983,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,2.15381273209015,1.02943027143257,0.206768026122887,0.215714200818617,0,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0,4.54933536283586,1.53084334748864,0.215915916102139,3.08454505380579,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0.229723400206959,0,0,1.13929437434833,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0.562677665642051,0,0,0,0.19924798825107,0,0.503865495708552,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.60298219312704,0,0.221158519862449,0.886642856860642,0.219385397153973,0,0,0.0769502585037971,0,0,0,0.217294743844016,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741412462787447,0,0.937057782901357,0,0,0,1.57833761139756,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0,0,0,2.23073497220554,0,0,0,0,0,0,0,1.20084057741958,0.547621515567972,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0.160753148465019,0.962776056180637,0.83088067605837,0,0,0.364497339948148,0,0.0788057072991982,0.314727528809989,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,1.32506888912221,0.646414781807753,0,0,0,0,0.314408610199332,0.414239055347196,0.496166021811951,0,0,0,0,0.5013797880454,0,0,0,0,0.854183854313742,0.3755727921195,1.14681839138014,0.776503360757966,0.931446044120752,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,27.8473145333205,21.1930156882894,0,0,0,0,0,0,0.449604575675217,0,0.319267718114302,0.205116364240755,0,0.622415272177961,0.807378228159255,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.19024743058172,0,0.548257766857182,0,1.05522746615772,0,0,0,0,0.455324382702595,0,0,0,0.203909198930495,0.526182188502793,0,0,0.078493092850514,0.785577949580009,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0.860454717640555,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0.231522474323834,0.218559560503957,0,0,0,1.76677620403451,1.48523200163543,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.716697915757256,0.946629373159108,0.611923411718232,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,1.65833887891756,0.517164979309476,0,0.952257725854961,0.258355639344024,0.186224142887574,0,0.12729431655633,0.808468755832877,0.217716747896961,0.684466602170562,0.202056159043763,0.143444410785353,0,0,0,0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| |||
|short_description=p@chr17:6946298..6946321,- | |||
}} |
Latest revision as of 20:29, 25 July 2015
Short description: | p@chr17:6946298..6946321, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:6946298..6946321, - |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 3.79e-18 | 3 |
central nervous system pericyte | 4.89e-13 | 2 |
endothelial cell | 3.25e-12 | 36 |
glomerular endothelial cell | 4.99e-12 | 5 |
embryonic stem cell | 2.48e-11 | 5 |
meso-epithelial cell | 1.75e-09 | 45 |
vein endothelial cell | 2.39e-09 | 6 |
glomerular cell | 1.01e-08 | 7 |
kidney corpuscule cell | 1.01e-08 | 7 |
lining cell | 4.89e-07 | 58 |
barrier cell | 4.89e-07 | 58 |
pericyte cell | 6.07e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
umbilical vein | 4.08e-11 | 5 |
spinal cord | 3.24e-09 | 3 |
dorsal region element | 3.24e-09 | 3 |
dorsum | 3.24e-09 | 3 |
primitive nephron | 1.01e-08 | 7 |
renal glomerulus | 1.01e-08 | 7 |
renal corpuscle | 1.01e-08 | 7 |
glomerular capsule | 1.01e-08 | 7 |
metanephric mesenchyme | 1.01e-08 | 7 |
glomerular tuft | 1.01e-08 | 7 |
S-shaped body | 1.01e-08 | 7 |
renal vesicle | 1.01e-08 | 7 |
comma-shaped body | 1.01e-08 | 7 |
duct | 4.06e-08 | 19 |
mesonephric epithelium | 1.10e-07 | 8 |
mesonephric tubule | 1.10e-07 | 8 |
nephric duct | 1.10e-07 | 8 |
renal duct | 1.10e-07 | 8 |
mesonephric duct | 1.10e-07 | 8 |
pronephric duct | 1.10e-07 | 8 |
vas deferens | 1.61e-07 | 1 |
spermatic cord | 1.61e-07 | 1 |
heart left ventricle | 2.21e-07 | 1 |
cardiac ventricle | 2.21e-07 | 1 |
future cardiac ventricle | 2.21e-07 | 1 |
parenchyma | 6.31e-07 | 15 |
mesonephros | 7.10e-07 | 9 |
pronephros | 7.10e-07 | 9 |
nephrogenic cord | 7.10e-07 | 9 |
pronephric mesoderm | 7.10e-07 | 9 |
rostral part of nephrogenic cord | 7.10e-07 | 9 |
presumptive pronephric mesoderm | 7.10e-07 | 9 |