FFCP PHASE1:Hg19::chr17:73737085..73737088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:73737085..73737088,+ | |||
|description=CAGE_peak_at_chr17:73737085..73737088,+ | |description=CAGE_peak_at_chr17:73737085..73737088,+ | ||
|id=chr17:73737085..73737088,+ | |id=chr17:73737085..73737088,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.04e-25!254;CL:0002159!2.21e-17!13;CL:0002076!2.55e-15!43;CL:0000223!6.29e-11!59;CL:0002368!8.35e-11!13;CL:0000076!4.10e-10!62;CL:0002251!1.57e-09!21;CL:0002202!1.92e-09!9;CL:0002632!1.92e-09!9;CL:0002077!2.85e-09!33;CL:0002328!2.24e-08!3;CL:0000349!3.54e-08!3;CL:0002577!3.54e-08!3;CL:0002166!6.11e-08!3;CL:0002621!7.20e-08!3;CL:0000362!1.39e-07!8;CL:0002605!1.41e-07!3;CL:0002150!7.29e-07!3;CL:0000861!7.29e-07!3;CL:0000240!8.24e-07!6;CL:0000311!8.24e-07!6;CL:0000079!8.24e-07!6;CL:0000237!8.24e-07!6;CL:0000036!8.24e-07!6;CL:0000357!8.24e-07!6;CL:0000114!8.24e-07!6 | |ontology_enrichment_celltype=CL:0000066!3.04e-25!254;CL:0002159!2.21e-17!13;CL:0002076!2.55e-15!43;CL:0000223!6.29e-11!59;CL:0002368!8.35e-11!13;CL:0000076!4.10e-10!62;CL:0002251!1.57e-09!21;CL:0002202!1.92e-09!9;CL:0002632!1.92e-09!9;CL:0002077!2.85e-09!33;CL:0002328!2.24e-08!3;CL:0000349!3.54e-08!3;CL:0002577!3.54e-08!3;CL:0002166!6.11e-08!3;CL:0002621!7.20e-08!3;CL:0000362!1.39e-07!8;CL:0002605!1.41e-07!3;CL:0002150!7.29e-07!3;CL:0000861!7.29e-07!3;CL:0000240!8.24e-07!6;CL:0000311!8.24e-07!6;CL:0000079!8.24e-07!6;CL:0000237!8.24e-07!6;CL:0000036!8.24e-07!6;CL:0000357!8.24e-07!6;CL:0000114!8.24e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:1001319;3.67e-23;1!CL:1000600;3.67e-23;1!CL:0002252;3.67e-23;1!CL:0000575;1.56e-12;2!CL:1000415;2.74e-12;2!CL:0000307;9.66e-09;3!CL:0002577;1.26e-08;3!CL:0002159;2.36e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002252,3.28e-23,1;CL:1001319,4.10e-23,1;CL:1000600,4.10e-23,1;CL:0000575,1.65e-12,2;CL:1000415,2.07e-12,2;CL:0000068,9.66e-09,3;CL:0000069,9.66e-09,3;CL:0000307,9.66e-09,3;CL:0000377,9.66e-09,3;CL:0002577,1.40e-08,3;CL:0002159,2.36e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.67e-23;1!CL:0000377;9.66e-09;3 | |||
|ontology_enrichment_disease=DOID:1749!3.97e-12!14;DOID:305!1.93e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001987!1.53e-10!4;UBERON:0004340!1.53e-10!4;UBERON:0004119!1.80e-10!169;UBERON:0000925!1.80e-10!169;UBERON:0006595!1.80e-10!169;UBERON:0004815!2.24e-08!3;UBERON:0002031!2.24e-08!3;UBERON:0003729!5.47e-08!5;UBERON:0001949!7.20e-08!3;UBERON:0007196!1.77e-07!14;UBERON:0001558!1.77e-07!14;UBERON:0000064!1.95e-07!219;UBERON:0005910!7.64e-07!6 | |ontology_enrichment_uberon=UBERON:0001987!1.53e-10!4;UBERON:0004340!1.53e-10!4;UBERON:0004119!1.80e-10!169;UBERON:0000925!1.80e-10!169;UBERON:0006595!1.80e-10!169;UBERON:0004815!2.24e-08!3;UBERON:0002031!2.24e-08!3;UBERON:0003729!5.47e-08!5;UBERON:0001949!7.20e-08!3;UBERON:0007196!1.77e-07!14;UBERON:0001558!1.77e-07!14;UBERON:0000064!1.95e-07!219;UBERON:0005910!7.64e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;3.67e-23;1!UBERON:0001256;3.67e-23;1!UBERON:0001259;3.67e-23;1!UBERON:0001987;8.02e-23;4!UBERON:0001255;2.74e-12;2!UBERON:0001556;2.74e-12;2!UBERON:0001043;1.26e-08;3!UBERON:0002110;1.26e-08;3!UBERON:0000077;5.84e-08;27!UBERON:0000964;6.68e-07;4!UBERON:0010409;6.68e-07;4!UBERON:0003343;8.85e-07;4!UBERON:0004785;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,4.10e-23,1;UBERON:0001256,4.10e-23,1;UBERON:0001259,4.10e-23,1;UBERON:0001987,1.25e-22,4;UBERON:0004340,1.25e-22,4;UBERON:0003124,2.17e-13,7;UBERON:0001255,2.90e-12,2;UBERON:0001556,2.90e-12,2;UBERON:0002110,1.04e-08,3;UBERON:0006242,1.04e-08,3;UBERON:0001043,1.21e-08,3;UBERON:0009143,1.21e-08,3;UBERON:0000077,2.08e-07,29;UBERON:0005631,3.66e-07,14;UBERON:0000158,3.66e-07,14;UBERON:0000964,6.87e-07,4;UBERON:0010409,6.87e-07,4;UBERON:0004348,6.87e-07,4;UBERON:0005427,6.87e-07,4;UBERON:0003343,8.14e-07,4;UBERON:0004785,8.14e-07,4 | |||
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| ||
|short_description=p@chr17:73737085..73737088,+ | |short_description=p@chr17:73737085..73737088,+ | ||
}} | }} |
Latest revision as of 21:12, 25 July 2015
Short description: | p@chr17:73737085..73737088, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73737085..73737088, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 3.28e-23 | 1 |
bladder cell | 4.10e-23 | 1 |
lower urinary tract cell | 4.10e-23 | 1 |
corneal epithelial cell | 1.65e-12 | 2 |
epithelial cell of gall bladder | 2.07e-12 | 2 |
duct epithelial cell | 9.66e-09 | 3 |
branched duct epithelial cell | 9.66e-09 | 3 |
tracheal epithelial cell | 9.66e-09 | 3 |
tracheoblast | 9.66e-09 | 3 |
placental epithelial cell | 1.40e-08 | 3 |
general ecto-epithelial cell | 2.36e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 4.10e-23 | 1 |
wall of urinary bladder | 4.10e-23 | 1 |
mucosa of urinary bladder | 4.10e-23 | 1 |
placenta | 1.25e-22 | 4 |
allantois | 1.25e-22 | 4 |
chorion | 2.17e-13 | 7 |
urinary bladder | 2.90e-12 | 2 |
lower urinary tract | 2.90e-12 | 2 |
gallbladder | 1.04e-08 | 3 |
gall bladder primordium | 1.04e-08 | 3 |
esophagus | 1.21e-08 | 3 |
esophageal region | 1.21e-08 | 3 |
mixed endoderm/mesoderm-derived structure | 2.08e-07 | 29 |
extraembryonic membrane | 3.66e-07 | 14 |
membranous layer | 3.66e-07 | 14 |
cornea | 6.87e-07 | 4 |
eye surface | 6.87e-07 | 4 |
optic eminence | 6.87e-07 | 4 |
corneal primordium | 6.87e-07 | 4 |
mucosa of oral region | 8.14e-07 | 4 |
respiratory system mucosa | 8.14e-07 | 4 |