FFCP PHASE1:Hg19::chr17:78844208..78844221,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:78844208..78844221,- | |||
|coexpression_cluster_id=C677 | |||
|description=CAGE_peak_at_chr17:78844208..78844221,- | |||
|id=chr17:78844208..78844221,- | |||
|ontology_enrichment_celltype=CL:0002057!1.84e-83!42;CL:0000860!1.92e-77!45;CL:0000766!1.37e-56!76;CL:0002194!1.76e-56!63;CL:0000576!1.76e-56!63;CL:0000040!1.76e-56!63;CL:0000559!1.76e-56!63;CL:0002009!1.48e-54!65;CL:0000839!3.21e-50!70;CL:0000557!2.00e-49!71;CL:0000763!2.95e-49!112;CL:0000049!2.95e-49!112;CL:0000037!3.98e-37!172;CL:0000566!3.98e-37!172;CL:0000738!1.09e-35!140;CL:0002032!7.81e-35!165;CL:0000837!7.81e-35!165;CL:0000988!1.23e-34!182;CL:0002087!3.00e-33!119;CL:0002031!1.82e-29!124;CL:0000134!1.86e-15!358;CL:0002320!5.41e-15!365;CL:0000767!1.17e-14!3;CL:0000219!2.35e-13!390;CL:0000048!2.15e-11!430;CL:0000723!4.09e-11!436;CL:0000034!9.38e-11!444;CL:0002393!5.15e-08!9;CL:0002397!5.15e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.04e-61;33!CL:0002057;8.04e-61;33!CL:0000473;9.32e-47;39!CL:0000234;9.32e-47;39!CL:0000576;1.96e-40;48!CL:0000766;8.07e-32;69!CL:0000767;5.36e-25;3!CL:0000763;2.56e-14;100!CL:0002393;2.46e-12;6!CL:0002397;2.46e-12;6!CL:0002087;1.96e-11;104!CL:0000094;9.95e-10;8!CL:0000081;3.35e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.08e-72,42;CL:0002057,1.08e-72,42;CL:0000473,6.10e-70,48;CL:0000234,6.10e-70,48;CL:0000766,1.66e-59,72;CL:0002194,2.72e-55,59;CL:0000576,2.72e-55,59;CL:0000040,2.72e-55,59;CL:0000559,2.72e-55,59;CL:0002009,2.12e-53,61;CL:0000839,3.64e-49,66;CL:0000557,2.15e-48,67;CL:0000763,3.59e-42,108;CL:0000049,3.59e-42,108;CL:0000738,4.80e-30,136;CL:0002032,3.44e-27,161;CL:0000837,3.44e-27,161;CL:0002087,6.00e-27,115;CL:0000037,6.55e-26,168;CL:0002031,1.09e-25,120;CL:0000767,7.44e-25,3;CL:0000988,2.06e-24,177;CL:0000134,2.56e-10,354;CL:0002320,4.84e-10,361;CL:0000094,1.12e-09,8;CL:0000219,4.58e-09,386;CL:0002393,2.84e-08,9;CL:0002397,2.84e-08,9;CL:0000048,7.22e-08,427;CL:0000723,1.06e-07,433;CL:0000034,1.73e-07,441;CL:0000081,3.65e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;9.27e-54;42!CL:0000049;5.17e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.75e-43!80;UBERON:0001474!1.08e-39!86;UBERON:0002390!6.76e-35!102;UBERON:0003061!6.76e-35!102;UBERON:0004765!8.03e-33!101;UBERON:0001434!8.03e-33!101;UBERON:0002193!3.59e-31!112;UBERON:0002405!5.16e-28!115;UBERON:0002204!3.49e-17!167;UBERON:0003081!4.53e-15!216;UBERON:0002384!2.33e-14!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.42e-42,76;UBERON:0001474,4.91e-39,82;UBERON:0004765,2.65e-35,90;UBERON:0002405,4.57e-34,93;UBERON:0002390,3.58e-32,98;UBERON:0003061,3.58e-32,98;UBERON:0001434,1.82e-31,100;UBERON:0002193,6.66e-29,108;UBERON:0002204,1.64e-17,167;UBERON:0003081,8.80e-14,203;UBERON:0002384,1.15e-09,371;UBERON:0000926,1.40e-07,315;UBERON:0004120,1.40e-07,315;UBERON:0006603,1.40e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,2.30297638858328,4.33485145285013,0,0,0,0,0,0,1.10799081706375,1.20326668482085,1.08505435357926,0,0,0,1.59938062657521,0.377875943688809,0,0,2.46700732813095,2.78735733805593,3.16461631554365,3.33008918487831,3.31075121844019,1.72372840368309,3.87290810150296,0,2.63539275359647,0.818718450173537,1.34834090667051,1.22433556948361,1.92557416245656,0.639337125799041,1.9791078011203,1.79517291859469,0,0.290209238628584,0,0,3.76872997885115,1.5644487552606,3.04064382587163,0.605399502633369,0,0.316462387440884,0.422510572623884,0,0,0.336985893439485,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,1.05836791361941,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0.23874448473769,0.890894042497916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:78844208..78844221,- | |||
}} |
Latest revision as of 22:34, 25 July 2015
Short description: | p@chr17:78844208..78844221, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:78844208..78844221, - |
Coexpression cluster: | C677_Basophils_CD14_Eosinophils_Neutrophils_CD34_Peripheral_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.42e-42 | 76 |
bone element | 4.91e-39 | 82 |
skeletal element | 2.65e-35 | 90 |
immune system | 4.57e-34 | 93 |
hematopoietic system | 3.58e-32 | 98 |
blood island | 3.58e-32 | 98 |
skeletal system | 1.82e-31 | 100 |
hemolymphoid system | 6.66e-29 | 108 |
musculoskeletal system | 1.64e-17 | 167 |
lateral plate mesoderm | 8.80e-14 | 203 |
connective tissue | 1.15e-09 | 371 |
mesoderm | 1.40e-07 | 315 |
mesoderm-derived structure | 1.40e-07 | 315 |
presumptive mesoderm | 1.40e-07 | 315 |