FFCP PHASE1:Hg19::chr17:81151248..81151274,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:81151248..81151274,+ | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_at_chr17:81151248..81151274,+ | |description=CAGE_peak_at_chr17:81151248..81151274,+ | ||
|id=chr17:81151248..81151274,+ | |id=chr17:81151248..81151274,+ | ||
|ontology_enrichment_celltype=CL:0002393;3.08e-38;6!CL:0002397;3.08e-38;6!CL:0000226;6.82e-20;3!CL:0000842;6.82e-20;3!CL:0000228;2.21e-15;1!CL:0002372;2.21e-15;1!CL:0000576;1.61e-14;48!CL:0000860;1.20e-10;33!CL:0002057;1.20e-10;33!CL:0000766;2.77e-10;69!CL:0000473;3.84e-09;39!CL:0000234;3.84e-09;39!CL:0002087;6.48e-07;104 | |ontology_enrichment_celltype=CL:0002057!1.87e-39!42;CL:0000860!3.01e-36!45;CL:0000839!4.62e-27!70;CL:0002194!6.76e-27!63;CL:0000576!6.76e-27!63;CL:0000040!6.76e-27!63;CL:0000559!6.76e-27!63;CL:0000557!1.49e-26!71;CL:0002009!8.24e-26!65;CL:0000766!3.23e-24!76;CL:0000738!2.40e-19!140;CL:0002087!2.58e-19!119;CL:0002393!1.54e-17!9;CL:0002397!1.54e-17!9;CL:0002031!1.22e-16!124;CL:0000134!4.97e-14!358;CL:0000037!1.14e-13!172;CL:0000566!1.14e-13!172;CL:0000763!1.27e-13!112;CL:0000049!1.27e-13!112;CL:0002320!1.91e-13!365;CL:0000219!1.10e-12!390;CL:0000988!2.52e-12!182;CL:0000048!5.19e-12!430;CL:0000723!1.31e-11!436;CL:0000224!3.32e-11!4;CL:0000034!4.36e-11!444;CL:0002032!3.97e-10!165;CL:0000837!3.97e-10!165;CL:0000842!8.33e-09!3;CL:0000784!8.25e-08!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002393;3.08e-38;6!CL:0002397;3.08e-38;6!CL:0000226;6.82e-20;3!CL:0000842;6.82e-20;3!CL:0000228;2.21e-15;1!CL:0002372;2.21e-15;1!CL:0000576;1.61e-14;48!CL:0000860;1.20e-10;33!CL:0002057;1.20e-10;33!CL:0000766;2.77e-10;69!CL:0000473;3.84e-09;39!CL:0000234;3.84e-09;39!CL:0002087;6.48e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.51e-26,42;CL:0002057,1.51e-26,42;CL:0002393,1.35e-25,9;CL:0002397,1.35e-25,9;CL:0000473,3.91e-23,48;CL:0000234,3.91e-23,48;CL:0000226,7.88e-20,3;CL:0000842,7.88e-20,3;CL:0002194,2.38e-18,59;CL:0000576,2.38e-18,59;CL:0000040,2.38e-18,59;CL:0000559,2.38e-18,59;CL:0002009,9.88e-18,61;CL:0000839,2.40e-16,66;CL:0000557,4.29e-16,67;CL:0000228,2.06e-15,1;CL:0002372,2.06e-15,1;CL:0000766,6.21e-15,72;CL:0002087,1.07e-13,115;CL:0000738,2.05e-11,136;CL:0000763,1.05e-09,108;CL:0000049,1.05e-09,108;CL:0000037,5.09e-09,168;CL:0002031,1.20e-08,120;CL:0000988,1.69e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.13e-24!80;UBERON:0001474!9.51e-24!86;UBERON:0002390!1.42e-21!102;UBERON:0003061!1.42e-21!102;UBERON:0004765!2.93e-20!101;UBERON:0001434!2.93e-20!101;UBERON:0002193!9.32e-19!112;UBERON:0002405!3.23e-14!115;UBERON:0002384!2.58e-13!375;UBERON:0002204!1.57e-12!167;UBERON:0003081!2.92e-12!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.84e-19,98;UBERON:0003061,1.84e-19,98;UBERON:0002193,1.44e-17,108;UBERON:0002371,1.77e-17,76;UBERON:0001474,3.82e-16,82;UBERON:0004765,1.23e-14,90;UBERON:0002405,3.89e-14,93;UBERON:0001434,4.38e-13,100;UBERON:0002204,4.38e-09,167;UBERON:0003081,8.79e-09,203;UBERON:0000926,1.94e-07,315;UBERON:0004120,1.94e-07,315;UBERON:0006603,1.94e-07,315 | |||
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| ||
|short_description=p@chr17:81151248..81151274,+ | |short_description=p@chr17:81151248..81151274,+ | ||
}} | }} |
Latest revision as of 23:19, 25 July 2015
Short description: | p@chr17:81151248..81151274, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:81151248..81151274, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.51e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.51e-26 | 42 |
intermediate monocyte | 1.35e-25 | 9 |
CD14-positive, CD16-positive monocyte | 1.35e-25 | 9 |
defensive cell | 3.91e-23 | 48 |
phagocyte | 3.91e-23 | 48 |
single nucleate cell | 7.88e-20 | 3 |
mononuclear cell | 7.88e-20 | 3 |
monopoietic cell | 2.38e-18 | 59 |
monocyte | 2.38e-18 | 59 |
monoblast | 2.38e-18 | 59 |
promonocyte | 2.38e-18 | 59 |
macrophage dendritic cell progenitor | 9.88e-18 | 61 |
myeloid lineage restricted progenitor cell | 2.40e-16 | 66 |
granulocyte monocyte progenitor cell | 4.29e-16 | 67 |
multinucleate cell | 2.06e-15 | 1 |
myotube | 2.06e-15 | 1 |
myeloid leukocyte | 6.21e-15 | 72 |
nongranular leukocyte | 1.07e-13 | 115 |
leukocyte | 2.05e-11 | 136 |
myeloid cell | 1.05e-09 | 108 |
common myeloid progenitor | 1.05e-09 | 108 |
hematopoietic stem cell | 5.09e-09 | 168 |
hematopoietic lineage restricted progenitor cell | 1.20e-08 | 120 |
hematopoietic cell | 1.69e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.84e-19 | 98 |
blood island | 1.84e-19 | 98 |
hemolymphoid system | 1.44e-17 | 108 |
bone marrow | 1.77e-17 | 76 |
bone element | 3.82e-16 | 82 |
skeletal element | 1.23e-14 | 90 |
immune system | 3.89e-14 | 93 |
skeletal system | 4.38e-13 | 100 |
musculoskeletal system | 4.38e-09 | 167 |
lateral plate mesoderm | 8.79e-09 | 203 |
mesoderm | 1.94e-07 | 315 |
mesoderm-derived structure | 1.94e-07 | 315 |
presumptive mesoderm | 1.94e-07 | 315 |