FFCP PHASE1:Hg19::chr18:57571417..57571428,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:57571417..57571428,+
|short_description=p@chr18:57571417..57571428,+
|description=CAGE_peak_at_chr18:57571417..57571428,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:57571417..57571428,+ | |||
|description=CAGE_peak_at_chr18:57571417..57571428,+ | |||
|id=chr18:57571417..57571428,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.07e-18!45;CL:0002087!3.25e-18!119;CL:0000738!7.22e-17!140;CL:0002057!6.67e-16!42;CL:0000988!7.79e-16!182;CL:0002031!6.84e-15!124;CL:0000037!1.96e-14!172;CL:0000566!1.96e-14!172;CL:0002032!3.96e-14!165;CL:0000837!3.96e-14!165;CL:0002009!5.95e-12!65;CL:0002194!1.52e-11!63;CL:0000576!1.52e-11!63;CL:0000040!1.52e-11!63;CL:0000559!1.52e-11!63;CL:0000557!2.91e-10!71;CL:0000766!4.40e-10!76;CL:0000839!1.27e-09!70;CL:0000763!2.19e-08!112;CL:0000049!2.19e-08!112;CL:0002393!1.71e-07!9;CL:0002397!1.71e-07!9;CL:0000047!2.73e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.67e-20;33!CL:0002057;4.67e-20;33!CL:0000576;2.24e-14;48!CL:0000228;9.72e-14;1!CL:0002372;9.72e-14;1!CL:0000473;1.91e-13;39!CL:0000234;1.91e-13;39!CL:0000047;1.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.62e-23,42;CL:0002057,6.62e-23,42;CL:0000473,6.29e-20,48;CL:0000234,6.29e-20,48;CL:0002194,9.45e-16,59;CL:0000576,9.45e-16,59;CL:0000040,9.45e-16,59;CL:0000559,9.45e-16,59;CL:0002009,3.27e-15,61;CL:0000839,5.29e-14,66;CL:0000228,7.55e-14,1;CL:0002372,7.55e-14,1;CL:0000557,8.80e-14,67;CL:0000766,9.06e-13,72;CL:0002087,1.41e-11,115;CL:0002031,4.84e-11,120;CL:0000738,1.38e-09,136;CL:0000763,3.30e-08,108;CL:0000049,3.30e-08,108;CL:0002032,6.94e-08,161;CL:0000837,6.94e-08,161;CL:0000037,1.69e-07,168;CL:0000047,3.67e-07,8;CL:0000988,4.81e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;9.57e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.20e-08!102;UBERON:0003061!1.20e-08!102;UBERON:0002371!3.03e-08!80;UBERON:0001474!3.68e-07!86;UBERON:0002193!4.24e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.71e-12,76;UBERON:0001474,4.15e-11,82;UBERON:0004765,4.85e-10,90;UBERON:0002405,1.10e-09,93;UBERON:0002390,3.82e-09,98;UBERON:0003061,3.82e-09,98;UBERON:0001434,6.08e-09,100;UBERON:0002193,3.30e-08,108 | |||
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| ||
|short_description=p@chr18:57571417..57571428,+ | |||
}} | }} |
Latest revision as of 01:42, 26 July 2015
Short description: | p@chr18:57571417..57571428, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:57571417..57571428, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.62e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.62e-23 | 42 |
defensive cell | 6.29e-20 | 48 |
phagocyte | 6.29e-20 | 48 |
monopoietic cell | 9.45e-16 | 59 |
monocyte | 9.45e-16 | 59 |
monoblast | 9.45e-16 | 59 |
promonocyte | 9.45e-16 | 59 |
macrophage dendritic cell progenitor | 3.27e-15 | 61 |
myeloid lineage restricted progenitor cell | 5.29e-14 | 66 |
multinucleate cell | 7.55e-14 | 1 |
myotube | 7.55e-14 | 1 |
granulocyte monocyte progenitor cell | 8.80e-14 | 67 |
myeloid leukocyte | 9.06e-13 | 72 |
nongranular leukocyte | 1.41e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 4.84e-11 | 120 |
leukocyte | 1.38e-09 | 136 |
myeloid cell | 3.30e-08 | 108 |
common myeloid progenitor | 3.30e-08 | 108 |
hematopoietic oligopotent progenitor cell | 6.94e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.94e-08 | 161 |
hematopoietic stem cell | 1.69e-07 | 168 |
neuronal stem cell | 3.67e-07 | 8 |
hematopoietic cell | 4.81e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.71e-12 | 76 |
bone element | 4.15e-11 | 82 |
skeletal element | 4.85e-10 | 90 |
immune system | 1.10e-09 | 93 |
hematopoietic system | 3.82e-09 | 98 |
blood island | 3.82e-09 | 98 |
skeletal system | 6.08e-09 | 100 |
hemolymphoid system | 3.30e-08 | 108 |