FFCP PHASE1:Hg19::chr19:12902681..12902688,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:12902681..12902688,- | |||
|coexpression_cluster_id=C1809 | |||
|description=CAGE_peak_at_chr19:12902681..12902688,- | |||
|id=chr19:12902681..12902688,- | |||
|ontology_enrichment_celltype=CL:0000738!5.55e-18!140;CL:0000860!6.02e-18!45;CL:0002057!8.49e-18!42;CL:0000766!2.55e-17!76;CL:0002087!2.45e-16!119;CL:0002009!2.40e-15!65;CL:0002194!2.67e-15!63;CL:0000576!2.67e-15!63;CL:0000040!2.67e-15!63;CL:0000559!2.67e-15!63;CL:0002031!3.06e-15!124;CL:0000839!6.85e-15!70;CL:0000557!8.95e-15!71;CL:0000037!1.37e-10!172;CL:0000566!1.37e-10!172;CL:0000988!1.03e-09!182;CL:0002032!2.86e-09!165;CL:0000837!2.86e-09!165;CL:0000763!1.52e-07!112;CL:0000049!1.52e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000624;7.08e-17;6!CL:0002393;4.26e-16;6!CL:0002397;4.26e-16;6!CL:0000084;1.12e-11;25!CL:0000791;1.54e-11;18!CL:0000789;1.54e-11;18!CL:0002419;1.54e-11;18!CL:0002087;2.49e-11;104!CL:0000226;5.97e-10;3!CL:0000842;5.97e-10;3!CL:0000623;1.48e-09;3!CL:0000898;6.50e-09;3!CL:0000576;7.94e-09;48!CL:0000542;1.76e-08;53!CL:0000738;7.97e-08;136!CL:0000766;2.43e-07;69!CL:0000860;6.87e-07;33!CL:0002057;6.87e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.79e-34,136;CL:0002087,3.56e-30,115;CL:0002031,2.08e-26,120;CL:0000037,5.42e-25,168;CL:0000988,4.17e-23,177;CL:0002032,6.83e-21,161;CL:0000837,6.83e-21,161;CL:0000624,2.69e-17,6;CL:0000860,2.48e-16,42;CL:0002057,2.48e-16,42;CL:0000473,1.81e-15,48;CL:0000234,1.81e-15,48;CL:0000766,3.16e-15,72;CL:0002393,2.16e-14,9;CL:0002397,2.16e-14,9;CL:0002009,7.25e-14,61;CL:0000557,1.80e-13,67;CL:0000838,2.05e-13,52;CL:0000542,4.51e-13,53;CL:0000051,4.51e-13,53;CL:0002194,6.73e-13,59;CL:0000576,6.73e-13,59;CL:0000040,6.73e-13,59;CL:0000559,6.73e-13,59;CL:0000839,2.86e-12,66;CL:0000084,9.43e-12,25;CL:0000827,9.43e-12,25;CL:0000791,9.95e-12,18;CL:0000789,9.95e-12,18;CL:0002420,9.95e-12,18;CL:0002419,9.95e-12,18;CL:0000790,9.95e-12,18;CL:0000226,5.30e-10,3;CL:0000842,5.30e-10,3;CL:0000623,1.50e-09,3;CL:0000825,1.50e-09,3;CL:0000763,3.50e-09,108;CL:0000049,3.50e-09,108;CL:0000898,4.12e-09,3;CL:0002320,8.10e-09,361;CL:0000134,1.39e-08,354;CL:0000219,8.44e-07,386;CL:0000815,9.08e-07,2;CL:0000792,9.08e-07,2;CL:0002677,9.08e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.01e-12;42!CL:0000790;1.54e-11;18!CL:0000051;1.76e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.25e-12!80;UBERON:0002390!5.76e-12!102;UBERON:0003061!5.76e-12!102;UBERON:0001474!8.66e-12!86;UBERON:0004765!2.61e-11!101;UBERON:0001434!2.61e-11!101;UBERON:0002193!2.04e-10!112;UBERON:0002405!1.08e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.25e-14,98;UBERON:0003061,3.25e-14,98;UBERON:0002193,2.30e-13,108;UBERON:0002371,2.99e-11,76;UBERON:0001474,3.03e-11,82;UBERON:0004765,6.56e-11,90;UBERON:0002405,3.04e-10,93;UBERON:0001434,2.98e-09,100;UBERON:0002384,2.99e-08,371 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0.246301768349837,0.157421562627358,0.786728553697808,0,0.928896739896456,0,0.6024118375565,0.369754010166788,0.0774672005803016,0,0,2.21598163412751,1.40381113229099,4.12320654360118,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0,1.39457422143411,0.822335776043652,0.619412741790207,2.01384674625505,0.256160706529101,0.47296445977717,0.689491361473237,1.93645405075148,1.35426486594342,1.31769637679823,0.272906150057846,0.449446968890169,1.83650335422542,0.962787081228281,1.27867425159808,0.659702600373432,0.598390972864896,0.426224750532694,1.7412554317715,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0.65156653411535,1.21079900526674,0.368277635987565,0.316462387440884,1.69004229049553,1.4882300997553,1.46761051855863,1.34794357375794,1.65194582125657,0.64290234678832,0,1.9891667719909,0.730656615058536,0,0,0,0,0,0,0,0,4.55370375287559,1.76171156811282,3.05818582500183,0,0,0.263384084775077,1.7703879310245,9.03924754323079,8.22405995998037,0,1.62961133316795,0,0,0.111410456885174,3.53527088969805,1.55073726208535,0,0.25618263945135,1.1705341280389,0,0.276350017785848,0,2.66915813691709,1.87278579662799,2.09071047609954,0.226618685395132,1.53288197440768,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,3.02410114837099,3.4767225451856,3.33096128930438,0,0.670700859703636,0.12786256184353,0,0,0.724232594804119,0,0.973269740605272,0,0.443458794925128,0.263504357079378,0.589405839739707,0.364295288292542,1.11235332835329,0.324547393654683,0.174129737299267,0.797747763113191,1.90792499444274,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,2.63560834872127,0,0,0.993943903390637,0,0.132409180813219,0,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0,0,0,0,2.3218396401599,0,0.236613600079688,0.168584690078102,0,0.661763836394364,0.435758888184812,1.66089433377768,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,0,0,0.109750285408626,0,0.402115889646523,0.462942225792648,0,0,0,0,0.234817388471643,0.288732895522148,1.38895653772983,0,0.790204397959275,0,0,0,0.594524649154913,0,0,0,0.268675568108545,0,0,0,0,0.414656231081544,0.288239906833923,1.00993946741104,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,1.06617584622764,0.791951872933429,0,0,0.099972991182057,0,1.50677127429638,0,0,0,0,0,0.410952645100767,0,0,1.37921532141349,5.17506179662842,4.74869234235069,0,0,0,0,0.637938751653163,4.49404214368309,5.9832291840805,0.414415513436035,0.24538298343828,2.50085260529839,0,0.207970861530807,0.535286966391485,0.315404830067869,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,2.48121631347465,4.96142661882819,8.11129439306177,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0,0,0.116210378459959,0.120859449591622,0,0.368323955743585,0.114814448164607,0,0.262248829918848,0,0.308061348417659,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0.412164046590889,0.183138929636687,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.255679882248303,0,0,0.384380134730212,0.382838137483752,0.4046311234222,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0.565621727814851,0,0,0.66343897524122,0,0,1.31178950409327,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.844430541190656,0.987884678879706,0,0,0.0962221127255121,0,0,0.941438007767792,0,0,0.886860307073351,0.459446800413919,0,0,0,0,1.23408681925858,0,0,2.37937552888281,0.106824071127473,0,0.735120647943095,0,0,0,0.159426272728822,0,0,0.423347165447766,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0.293016358543788,0,0.557216921387392,0.284136146806413,0.23874448473769,0,0.307160702099232,0,0,0.556543525114529,1.15362711958732,0,0.796991953004279,1.65770349318689,0.251932747854276,0.102268682502155,0,0.933118762985422,0.0898683511473268,0,0,0.690503839458535,0,0,0,0.0927680981618513,0,1.04171104434093,0.262379999988587,0,0.1137934482855,0.508507300585533,0.709163045303809,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0.975966209950223,0.692552326534174,0.455768223388005,0,0,0,4.14701507651495,0.183195186803725,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,1.26598838716816,0.816164040795739,0,0,0,0.353830258013357,0.611030144933625,0,0.370691816839509,0.522109747527277,0.202203398942031,0,0.234264445725339,0,0.19566461893209,0.728341138602278,0,0,0,0.252746318513952,0.300646838828985,0,0,0,0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| |||
|short_description=p@chr19:12902681..12902688,- | |||
}} |
Latest revision as of 03:48, 26 July 2015
Short description: | p@chr19:12902681..12902688, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:12902681..12902688, - |
Coexpression cluster: | C1809_CD4_Peripheral_normal_Neutrophils_CD8_Natural_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.25e-14 | 98 |
blood island | 3.25e-14 | 98 |
hemolymphoid system | 2.30e-13 | 108 |
bone marrow | 2.99e-11 | 76 |
bone element | 3.03e-11 | 82 |
skeletal element | 6.56e-11 | 90 |
immune system | 3.04e-10 | 93 |
skeletal system | 2.98e-09 | 100 |
connective tissue | 2.99e-08 | 371 |