FFCP PHASE1:Hg19::chr19:1566750..1566770,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:1566750..1566770,+ | |||
|description=CAGE_peak_at_chr19:1566750..1566770,+ | |description=CAGE_peak_at_chr19:1566750..1566770,+ | ||
|id=chr19:1566750..1566770,+ | |id=chr19:1566750..1566770,+ | ||
|ontology_enrichment_celltype=CL:0000115!1.39e-16!35;CL:0002321!1.81e-15!248;CL:0000220!1.10e-14!246;CL:0002078!3.47e-14!44;CL:0002139!4.72e-14!24;CL:0000066!5.15e-14!254;CL:0000213!4.31e-12!57;CL:0000215!4.31e-12!57;CL:0000222!6.95e-12!119;CL:0000071!2.72e-11!18;CL:0002546!2.72e-11!18;CL:1000497!3.64e-09!18;CL:0002518!3.64e-09!18;CL:1000449!1.07e-08!16;CL:0000055!6.21e-08!180;CL:0002319!1.25e-07!25;CL:0000133!8.08e-07!59;CL:0002681!9.86e-07!13;CL:0002584!9.86e-07!13 | |ontology_enrichment_celltype=CL:0000115!1.39e-16!35;CL:0002321!1.81e-15!248;CL:0000220!1.10e-14!246;CL:0002078!3.47e-14!44;CL:0002139!4.72e-14!24;CL:0000066!5.15e-14!254;CL:0000213!4.31e-12!57;CL:0000215!4.31e-12!57;CL:0000222!6.95e-12!119;CL:0000071!2.72e-11!18;CL:0002546!2.72e-11!18;CL:1000497!3.64e-09!18;CL:0002518!3.64e-09!18;CL:1000449!1.07e-08!16;CL:0000055!6.21e-08!180;CL:0002319!1.25e-07!25;CL:0000133!8.08e-07!59;CL:0002681!9.86e-07!13;CL:0002584!9.86e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000071;2.42e-20;18!CL:0000115;1.36e-18;36!CL:0002139;3.93e-17;24!CL:1000413;1.49e-14;9!CL:1000449;2.11e-14;15!CL:1000497;1.72e-12;17!CL:0002518;1.72e-12;17!CL:0000540;5.74e-12;6!CL:0000404;5.74e-12;6!CL:0002078;1.35e-11;45!CL:0002681;5.56e-11;12!CL:0002584;5.56e-11;12!CL:1000746;1.57e-10;7!CL:1000612;1.57e-10;7!CL:0002188;4.99e-10;5!CL:0000213;9.33e-09;58!CL:0000215;9.33e-09;58!CL:0002544;5.98e-08;6!CL:0002543;7.81e-08;6!CL:1000507;5.00e-07;10!CL:1000494;5.00e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,9.71e-22,36;CL:0000071,1.09e-20,18;CL:0002546,1.09e-20,18;CL:0002078,1.63e-18,45;CL:0002139,1.95e-17,24;CL:1000413,8.71e-15,9;CL:1000449,1.77e-14,15;CL:1000497,1.48e-12,17;CL:0002518,1.48e-12,17;CL:0000540,3.60e-12,6;CL:0000031,3.60e-12,6;CL:0000404,3.60e-12,6;CL:0000213,1.01e-11,58;CL:0000215,1.01e-11,58;CL:0002681,5.28e-11,12;CL:0002584,5.28e-11,12;CL:1000746,2.03e-10,7;CL:1000612,2.03e-10,7;CL:0002188,8.75e-10,5;CL:0000047,4.97e-09,8;CL:0000066,3.05e-08,253;CL:0002544,4.32e-08,6;CL:0002543,5.30e-08,6;CL:1000507,3.13e-07,10;CL:1000494,3.13e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;2.42e-20;18!CL:0000031;5.74e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr19:1566750..1566770,+ | |short_description=p@chr19:1566750..1566770,+ | ||
}} | }} |
Latest revision as of 04:34, 26 July 2015
Short description: | p@chr19:1566750..1566770, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1566750..1566770, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 9.71e-22 | 36 |
blood vessel endothelial cell | 1.09e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.09e-20 | 18 |
meso-epithelial cell | 1.63e-18 | 45 |
endothelial cell of vascular tree | 1.95e-17 | 24 |
endothelial cell of artery | 8.71e-15 | 9 |
epithelial cell of nephron | 1.77e-14 | 15 |
kidney cell | 1.48e-12 | 17 |
kidney epithelial cell | 1.48e-12 | 17 |
neuron | 3.60e-12 | 6 |
neuroblast | 3.60e-12 | 6 |
electrically signaling cell | 3.60e-12 | 6 |
lining cell | 1.01e-11 | 58 |
barrier cell | 1.01e-11 | 58 |
kidney cortical cell | 5.28e-11 | 12 |
renal cortical epithelial cell | 5.28e-11 | 12 |
glomerular cell | 2.03e-10 | 7 |
kidney corpuscule cell | 2.03e-10 | 7 |
glomerular endothelial cell | 8.75e-10 | 5 |
neuronal stem cell | 4.97e-09 | 8 |
epithelial cell | 3.05e-08 | 253 |
aortic endothelial cell | 4.32e-08 | 6 |
vein endothelial cell | 5.30e-08 | 6 |
kidney tubule cell | 3.13e-07 | 10 |
nephron tubule epithelial cell | 3.13e-07 | 10 |