FFCP PHASE1:Hg19::chr19:2766953..2766958,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:2766953..2766958,+ | |||
|coexpression_cluster_id=C1650 | |||
|description=CAGE_peak_at_chr19:2766953..2766958,+ | |description=CAGE_peak_at_chr19:2766953..2766958,+ | ||
|id=chr19:2766953..2766958,+ | |id=chr19:2766953..2766958,+ | ||
|ontology_enrichment_celltype=CL:0000557!7.39e-23!71;CL:0002009!4.06e-21!65;CL:0000839!1.15e-20!70;CL:0002057!1.90e-20!42;CL:0002194!1.97e-19!63;CL:0000576!1.97e-19!63;CL:0000040!1.97e-19!63;CL:0000559!1.97e-19!63;CL:0000766!3.34e-19!76;CL:0000860!2.09e-18!45;CL:0000763!3.63e-14!112;CL:0000049!3.63e-14!112;CL:0002031!1.24e-08!124;CL:0000738!5.82e-08!140 | |ontology_enrichment_celltype=CL:0000557!7.39e-23!71;CL:0002009!4.06e-21!65;CL:0000839!1.15e-20!70;CL:0002057!1.90e-20!42;CL:0002194!1.97e-19!63;CL:0000576!1.97e-19!63;CL:0000040!1.97e-19!63;CL:0000559!1.97e-19!63;CL:0000766!3.34e-19!76;CL:0000860!2.09e-18!45;CL:0000763!3.63e-14!112;CL:0000049!3.63e-14!112;CL:0002031!1.24e-08!124;CL:0000738!5.82e-08!140 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.87e-16;39!CL:0000234;1.87e-16;39!CL:0000860;8.72e-15;33!CL:0002057;8.72e-15;33!CL:0000235;1.61e-09;6!CL:0000576;2.50e-09;48!CL:0000197;2.66e-09;6!CL:0000098;2.66e-09;6!CL:0002167;2.66e-09;6!CL:0000766;3.48e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.36e-20,48;CL:0000234,5.36e-20,48;CL:0002194,8.31e-16,59;CL:0000576,8.31e-16,59;CL:0000040,8.31e-16,59;CL:0000559,8.31e-16,59;CL:0002009,2.89e-15,61;CL:0000839,4.72e-14,66;CL:0000860,7.44e-14,42;CL:0002057,7.44e-14,42;CL:0000557,7.86e-14,67;CL:0000766,8.16e-13,72;CL:0000235,1.61e-09,6;CL:0000197,2.66e-09,6;CL:0000098,2.66e-09,6;CL:0002167,2.66e-09,6;CL:0000763,3.09e-08,108;CL:0000049,3.09e-08,108;CL:0002087,1.13e-07,115;CL:0002031,2.59e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.10e-13;1!CL:0002057;9.59e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.98e-20!80;UBERON:0001474!9.69e-19!86;UBERON:0004765!9.47e-16!101;UBERON:0001434!9.47e-16!101;UBERON:0002390!1.93e-13!102;UBERON:0003061!1.93e-13!102;UBERON:0002193!1.14e-12!112;UBERON:0002405!1.16e-12!115;UBERON:0002204!1.50e-09!167 | |ontology_enrichment_uberon=UBERON:0002371!4.98e-20!80;UBERON:0001474!9.69e-19!86;UBERON:0004765!9.47e-16!101;UBERON:0001434!9.47e-16!101;UBERON:0002390!1.93e-13!102;UBERON:0003061!1.93e-13!102;UBERON:0002193!1.14e-12!112;UBERON:0002405!1.16e-12!115;UBERON:0002204!1.50e-09!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.27e-12,76;UBERON:0001474,3.79e-11,82;UBERON:0004765,4.47e-10,90;UBERON:0002405,1.01e-09,93;UBERON:0002390,3.54e-09,98;UBERON:0003061,3.54e-09,98;UBERON:0001434,5.65e-09,100;UBERON:0002193,3.09e-08,108;UBERON:0000341,1.45e-07,2 | |||
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| ||
|short_description=p@chr19:2766953..2766958,+ | |short_description=p@chr19:2766953..2766958,+ | ||
}} | }} |
Latest revision as of 05:57, 26 July 2015
Short description: | p@chr19:2766953..2766958, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:2766953..2766958, + |
Coexpression cluster: | C1650_Monocytederived_CD14_Skeletal_Mast_melanoma_Melanocyte_nasal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.36e-20 | 48 |
phagocyte | 5.36e-20 | 48 |
monopoietic cell | 8.31e-16 | 59 |
monocyte | 8.31e-16 | 59 |
monoblast | 8.31e-16 | 59 |
promonocyte | 8.31e-16 | 59 |
macrophage dendritic cell progenitor | 2.89e-15 | 61 |
myeloid lineage restricted progenitor cell | 4.72e-14 | 66 |
classical monocyte | 7.44e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.44e-14 | 42 |
granulocyte monocyte progenitor cell | 7.86e-14 | 67 |
myeloid leukocyte | 8.16e-13 | 72 |
macrophage | 1.61e-09 | 6 |
receptor cell | 2.66e-09 | 6 |
sensory epithelial cell | 2.66e-09 | 6 |
olfactory epithelial cell | 2.66e-09 | 6 |
myeloid cell | 3.09e-08 | 108 |
common myeloid progenitor | 3.09e-08 | 108 |
nongranular leukocyte | 1.13e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.59e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.27e-12 | 76 |
bone element | 3.79e-11 | 82 |
skeletal element | 4.47e-10 | 90 |
immune system | 1.01e-09 | 93 |
hematopoietic system | 3.54e-09 | 98 |
blood island | 3.54e-09 | 98 |
skeletal system | 5.65e-09 | 100 |
hemolymphoid system | 3.09e-08 | 108 |
throat | 1.45e-07 | 2 |