FFCP PHASE1:Hg19::chr19:45368705..45368719,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:45368705..45368719,+ to FFCP PHASE1:Hg19::chr19:45368705..45368719,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:45368705..45368719,+ | |||
|description=CAGE_peak_at_chr19:45368705..45368719,+ | |||
|id=chr19:45368705..45368719,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;8.17e-12;1!CL:0002537;2.57e-09;5!CL:0002188;2.57e-09;5!CL:1000746;6.77e-07;7!CL:1000612;6.77e-07;7!CL:0002596;9.42e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.32e-11,1;CL:0002188,2.36e-09,5;CL:0002537,2.91e-09,5;CL:1000746,6.39e-07,7;CL:1000612,6.39e-07,7;CL:0002596,9.44e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.35e-10;10!UBERON:0000158;5.35e-10;10!UBERON:0000305;6.77e-07;7!UBERON:0000074;6.77e-07;7!UBERON:0001229;6.77e-07;7!UBERON:0005396;9.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.99e-07,14;UBERON:0000158,2.99e-07,14;UBERON:0010532,6.39e-07,7;UBERON:0000074,6.39e-07,7;UBERON:0001229,6.39e-07,7;UBERON:0001230,6.39e-07,7;UBERON:0003220,6.39e-07,7;UBERON:0005749,6.39e-07,7;UBERON:0004199,6.39e-07,7;UBERON:0004209,6.39e-07,7;UBERON:0004198,6.39e-07,7;UBERON:0000305,7.41e-07,7;UBERON:0005396,9.44e-07,2 | |||
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| ||
|short_description=p@chr19:45368705..45368719,+ | |||
}} | }} |
Latest revision as of 14:46, 27 July 2015
Short description: | p@chr19:45368705..45368719, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45368705..45368719, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.32e-11 | 1 |
glomerular endothelial cell | 2.36e-09 | 5 |
amnion mesenchymal stem cell | 2.91e-09 | 5 |
glomerular cell | 6.39e-07 | 7 |
kidney corpuscule cell | 6.39e-07 | 7 |
smooth muscle cell of the carotid artery | 9.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.99e-07 | 14 |
membranous layer | 2.99e-07 | 14 |
primitive nephron | 6.39e-07 | 7 |
renal glomerulus | 6.39e-07 | 7 |
renal corpuscle | 6.39e-07 | 7 |
glomerular capsule | 6.39e-07 | 7 |
metanephric mesenchyme | 6.39e-07 | 7 |
glomerular tuft | 6.39e-07 | 7 |
S-shaped body | 6.39e-07 | 7 |
renal vesicle | 6.39e-07 | 7 |
comma-shaped body | 6.39e-07 | 7 |
amnion | 7.41e-07 | 7 |
carotid artery segment | 9.44e-07 | 2 |