FFCP PHASE1:Hg19::chr19:49377361..49377372,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:49377361..49377372,+ | |||
|coexpression_cluster_id=C692 | |coexpression_cluster_id=C692 | ||
|description=CAGE_peak_at_chr19:49377361..49377372,+ | |description=CAGE_peak_at_chr19:49377361..49377372,+ | ||
|id=chr19:49377361..49377372,+ | |id=chr19:49377361..49377372,+ | ||
|ontology_enrichment_celltype=CL:0000860;6.95e-71;33!CL:0002057;6.95e-71;33!CL:0000473;2.04e-50;39!CL:0000234;2.04e-50;39!CL:0000576;3.56e-41;48!CL:0000766;1.87e-34;69!CL:0000763;4.73e-16;100!CL:0000097;1.18e-14;5!CL:0002087;5.28e-12;104!CL:0000163;2.35e-08;9!CL:0000738;2.86e-08;136 | |ontology_enrichment_celltype=CL:0002057!6.02e-37!42;CL:0000860!1.01e-33!45;CL:0000766!1.33e-31!76;CL:0000839!4.90e-28!70;CL:0000557!1.83e-27!71;CL:0000738!1.15e-24!140;CL:0002194!2.77e-23!63;CL:0000576!2.77e-23!63;CL:0000040!2.77e-23!63;CL:0000559!2.77e-23!63;CL:0002009!3.10e-22!65;CL:0002031!2.61e-21!124;CL:0000763!4.05e-19!112;CL:0000049!4.05e-19!112;CL:0002087!4.65e-19!119;CL:0000037!9.43e-18!172;CL:0000566!9.43e-18!172;CL:0002032!2.15e-17!165;CL:0000837!2.15e-17!165;CL:0000988!7.39e-16!182;CL:0002274!2.97e-09!5;CL:0000457!2.97e-09!5;CL:0002191!2.97e-09!5;CL:0000097!2.97e-09!5;CL:0000831!2.97e-09!5;CL:0002028!2.97e-09!5;CL:0000134!1.92e-08!358;CL:0000063!3.76e-08!578;CL:0002320!6.34e-08!365;CL:0000219!3.35e-07!390 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;6.95e-71;33!CL:0002057;6.95e-71;33!CL:0000473;2.04e-50;39!CL:0000234;2.04e-50;39!CL:0000576;3.56e-41;48!CL:0000766;1.87e-34;69!CL:0000763;4.73e-16;100!CL:0000097;1.18e-14;5!CL:0002087;5.28e-12;104!CL:0000163;2.35e-08;9!CL:0000738;2.86e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.92e-73,42;CL:0002057,4.92e-73,42;CL:0000473,1.85e-63,48;CL:0000234,1.85e-63,48;CL:0000839,2.16e-59,66;CL:0000766,3.03e-59,72;CL:0000557,1.83e-58,67;CL:0002194,4.76e-50,59;CL:0000576,4.76e-50,59;CL:0000040,4.76e-50,59;CL:0000559,4.76e-50,59;CL:0002009,2.57e-48,61;CL:0000763,2.26e-38,108;CL:0000049,2.26e-38,108;CL:0002031,4.17e-34,120;CL:0000738,1.86e-32,136;CL:0002032,8.16e-27,161;CL:0000837,8.16e-27,161;CL:0002087,9.37e-27,115;CL:0000037,1.56e-25,168;CL:0000988,4.96e-24,177;CL:0000097,1.18e-14,5;CL:0002028,1.18e-14,5;CL:0000134,6.73e-10,354;CL:0002320,1.28e-09,361;CL:0000219,1.22e-08,386;CL:0000163,2.35e-08,9;CL:0000048,1.94e-07,427;CL:0000723,2.84e-07,433;CL:0000034,4.66e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.18e-55;42!CL:0000049;9.63e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.62e-24!80;UBERON:0001474!9.97e-22!86;UBERON:0002390!1.49e-19!102;UBERON:0003061!1.49e-19!102;UBERON:0004765!8.95e-18!101;UBERON:0001434!8.95e-18!101;UBERON:0002193!1.20e-16!112;UBERON:0002405!1.24e-15!115;UBERON:0002204!6.26e-08!167;UBERON:0002384!3.16e-07!375;UBERON:0003081!5.34e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.54e-51,76;UBERON:0001474,3.39e-47,82;UBERON:0004765,1.05e-42,90;UBERON:0002405,3.25e-41,93;UBERON:0002390,6.20e-39,98;UBERON:0003061,6.20e-39,98;UBERON:0001434,4.38e-38,100;UBERON:0002193,5.34e-35,108;UBERON:0002204,2.73e-21,167;UBERON:0003081,8.35e-17,203;UBERON:0000926,2.40e-09,315;UBERON:0004120,2.40e-09,315;UBERON:0006603,2.40e-09,315;UBERON:0002384,3.05e-09,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,1.40381113229099,1.51907609501096,0,0,0,0.290796477559129,0.755751887377619,0,0.464858073811369,1.23350366406548,1.54853185447552,1.1507695692886,1.0246428261164,0.47296445977717,2.06847408441971,1.29096936716765,2.70852973188684,1.31769637679823,1.09162460023138,0.449446968890169,1.83650335422542,2.24650318953266,1.91801137739712,0,0.398927315243264,0.426224750532694,1.45104619314292,1.13477044938228,0,1.00499466102697,1.0429658368404,1.3031330682307,3.02699751316684,1.84138817993782,0.632924774881769,0,0,0,0,0,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,1.96505381374582,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.088048434013226,6.84182781284548,4.75595846275973,6.56460653817176,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.646882724578552,0.898401253958239,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25485129121739,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0.171594997861965,0.288109595976299,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0.303859956177382,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0.26721740526556,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,1.40381113229099,1.51907609501096,0,0,0,0.290796477559129,0.755751887377619,0,0.464858073811369,1.23350366406548,1.54853185447552,1.1507695692886,1.0246428261164,0.47296445977717,2.06847408441971,1.29096936716765,2.70852973188684,1.31769637679823,1.09162460023138,0.449446968890169,1.83650335422542,2.24650318953266,1.91801137739712,0,0.398927315243264,0.426224750532694,1.45104619314292,1.13477044938228,0,1.00499466102697,1.0429658368404,1.3031330682307,3.02699751316684,1.84138817993782,0.632924774881769,0,0,0,0,0,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,1.96505381374582,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.088048434013226,6.84182781284548,4.75595846275973,6.56460653817176,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.646882724578552,0.898401253958239,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25485129121739,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0.171594997861965,0.288109595976299,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0.303859956177382,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0.26721740526556,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:49377361..49377372,+ | |short_description=p@chr19:49377361..49377372,+ | ||
}} | }} |
Latest revision as of 15:53, 27 July 2015
Short description: | p@chr19:49377361..49377372, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49377361..49377372, + |
Coexpression cluster: | C692_Mast_Eosinophils_Neutrophils_Basophils_immature_CD4_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.92e-73 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.92e-73 | 42 |
defensive cell | 1.85e-63 | 48 |
phagocyte | 1.85e-63 | 48 |
myeloid lineage restricted progenitor cell | 2.16e-59 | 66 |
myeloid leukocyte | 3.03e-59 | 72 |
granulocyte monocyte progenitor cell | 1.83e-58 | 67 |
monopoietic cell | 4.76e-50 | 59 |
monocyte | 4.76e-50 | 59 |
monoblast | 4.76e-50 | 59 |
promonocyte | 4.76e-50 | 59 |
macrophage dendritic cell progenitor | 2.57e-48 | 61 |
myeloid cell | 2.26e-38 | 108 |
common myeloid progenitor | 2.26e-38 | 108 |
hematopoietic lineage restricted progenitor cell | 4.17e-34 | 120 |
leukocyte | 1.86e-32 | 136 |
hematopoietic oligopotent progenitor cell | 8.16e-27 | 161 |
hematopoietic multipotent progenitor cell | 8.16e-27 | 161 |
nongranular leukocyte | 9.37e-27 | 115 |
hematopoietic stem cell | 1.56e-25 | 168 |
hematopoietic cell | 4.96e-24 | 177 |
mast cell | 1.18e-14 | 5 |
basophil mast progenitor cell | 1.18e-14 | 5 |
mesenchymal cell | 6.73e-10 | 354 |
connective tissue cell | 1.28e-09 | 361 |
motile cell | 1.22e-08 | 386 |
endocrine cell | 2.35e-08 | 9 |
multi fate stem cell | 1.94e-07 | 427 |
somatic stem cell | 2.84e-07 | 433 |
stem cell | 4.66e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.54e-51 | 76 |
bone element | 3.39e-47 | 82 |
skeletal element | 1.05e-42 | 90 |
immune system | 3.25e-41 | 93 |
hematopoietic system | 6.20e-39 | 98 |
blood island | 6.20e-39 | 98 |
skeletal system | 4.38e-38 | 100 |
hemolymphoid system | 5.34e-35 | 108 |
musculoskeletal system | 2.73e-21 | 167 |
lateral plate mesoderm | 8.35e-17 | 203 |
mesoderm | 2.40e-09 | 315 |
mesoderm-derived structure | 2.40e-09 | 315 |
presumptive mesoderm | 2.40e-09 | 315 |
connective tissue | 3.05e-09 | 371 |