FFCP PHASE1:Hg19::chr1:159859973..159859983,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:159859973..159859983,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr1:159859973..159859983,+ | |||
|id=chr1:159859973..159859983,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.88e-36!42;CL:0000860!6.81e-35!45;CL:0000839!1.46e-25!70;CL:0000766!3.02e-24!76;CL:0000557!1.58e-23!71;CL:0002194!6.39e-23!63;CL:0000576!6.39e-23!63;CL:0000040!6.39e-23!63;CL:0000559!6.39e-23!63;CL:0002009!6.86e-22!65;CL:0000763!2.78e-17!112;CL:0000049!2.78e-17!112;CL:0002031!2.39e-14!124;CL:0000738!3.48e-12!140;CL:0002087!7.26e-12!119;CL:0002032!1.09e-11!165;CL:0000837!1.09e-11!165;CL:0000037!1.11e-10!172;CL:0000566!1.11e-10!172;CL:0000988!1.25e-10!182;CL:0002320!7.77e-07!365;CL:0000219!9.46e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.26e-96;33!CL:0002057;8.26e-96;33!CL:0000473;1.40e-67;39!CL:0000234;1.40e-67;39!CL:0000576;2.68e-45;48!CL:0000766;9.61e-30;69!CL:0000763;9.83e-15;100!CL:0002087;3.91e-14;104!CL:0000738;3.07e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.60e-90,42;CL:0002057,7.60e-90,42;CL:0000473,4.93e-78,48;CL:0000234,4.93e-78,48;CL:0002194,1.18e-66,59;CL:0000576,1.18e-66,59;CL:0000040,1.18e-66,59;CL:0000559,1.18e-66,59;CL:0002009,2.38e-64,61;CL:0000839,5.18e-64,66;CL:0000557,5.34e-63,67;CL:0000766,6.62e-63,72;CL:0000763,1.79e-40,108;CL:0000049,1.79e-40,108;CL:0002031,5.72e-36,120;CL:0002087,7.28e-35,115;CL:0000738,1.12e-33,136;CL:0002032,1.12e-27,161;CL:0000837,1.12e-27,161;CL:0000037,2.58e-26,168;CL:0000988,1.02e-24,177;CL:0000134,1.04e-09,354;CL:0002320,2.04e-09,361;CL:0000219,2.23e-08,386;CL:0000048,4.17e-07,427;CL:0000723,6.26e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.20e-62;42!CL:0000049;2.64e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;2.39e-07;1!DOID:3165;2.39e-07;1!DOID:0060121;2.39e-07;1!DOID:2438;2.39e-07;1!DOID:4418;2.39e-07;1!DOID:2355;2.39e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.04e-07,1;DOID:3165,2.04e-07,1;DOID:0060121,2.04e-07,1;DOID:2438,2.04e-07,1;DOID:4418,2.04e-07,1;DOID:2355,2.17e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.73e-22!102;UBERON:0003061!6.73e-22!102;UBERON:0002371!1.36e-19!80;UBERON:0002193!9.95e-19!112;UBERON:0001474!1.91e-17!86;UBERON:0004765!3.28e-16!101;UBERON:0001434!3.28e-16!101;UBERON:0002405!6.29e-12!115;UBERON:0002204!2.93e-11!167;UBERON:0002203!2.35e-09!6;UBERON:0001768!2.35e-09!6;UBERON:0003081!2.59e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.62e-55,76;UBERON:0002390,4.08e-52,98;UBERON:0003061,4.08e-52,98;UBERON:0001474,1.00e-50,82;UBERON:0002193,7.26e-47,108;UBERON:0004765,7.88e-46,90;UBERON:0002405,3.29e-44,93;UBERON:0001434,8.44e-41,100;UBERON:0003081,1.32e-22,203;UBERON:0002204,1.64e-22,167;UBERON:0000926,1.13e-12,315;UBERON:0004120,1.13e-12,315;UBERON:0006603,1.13e-12,315;UBERON:0002384,5.15e-09,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.61560529038394,0.204000691244253,0,0,0.136874425072884,0,0.0764134057479513,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0,0,0,0,1.00272223735071,0,0,0,0,0.436194716338694,0,0.485168122375632,0.929716147622738,2.05583944010913,4.02618282163635,11.7953880852082,9.99026755463492,10.8781825748749,4.82643953031266,5.80936215225443,8.12558919566051,0.752969358170419,0.545812300115692,1.34834090667051,4.89734227793444,5.45579346029359,8.95071976118658,1.9791078011203,3.19141852194611,2.55734850319616,4.06292934080018,6.24123747160254,6.85104473895132,15.0749199154046,12.5155900420848,15.2032191293582,3.02699751316684,7.73383035573886,9.49387162322653,0,0,0,0,0,0.32145117339416,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.378139268656271,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.838998872419812,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0,1.65862492432618,0.144119953416961,0.6312121671319,0,0,0,0,0,0,0,0.112131084345361,0,0.5867062865676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,0.238231775457789,1.23408681925858,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0.411125773940253,1.58971689362392,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.627617077873999,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35477331305255,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0.342976018874837,0,0,0,0.444925607568277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.61560529038394,0.204000691244253,0,0,0.136874425072884,0,0.0764134057479513,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0,0,0,0,1.00272223735071,0,0,0,0,0.436194716338694,0,0.485168122375632,0.929716147622738,2.05583944010913,4.02618282163635,11.7953880852082,9.99026755463492,10.8781825748749,4.82643953031266,5.80936215225443,8.12558919566051,0.752969358170419,0.545812300115692,1.34834090667051,4.89734227793444,5.45579346029359,8.95071976118658,1.9791078011203,3.19141852194611,2.55734850319616,4.06292934080018,6.24123747160254,6.85104473895132,15.0749199154046,12.5155900420848,15.2032191293582,3.02699751316684,7.73383035573886,9.49387162322653,0,0,0,0,0,0.32145117339416,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.378139268656271,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.838998872419812,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0,1.65862492432618,0.144119953416961,0.6312121671319,0,0,0,0,0,0,0,0.112131084345361,0,0.5867062865676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,0.238231775457789,1.23408681925858,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0.411125773940253,1.58971689362392,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.627617077873999,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35477331305255,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0.342976018874837,0,0,0,0.444925607568277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:159859973..159859983,+ | |||
}} | }} |
Latest revision as of 23:09, 27 July 2015
Short description: | p@chr1:159859973..159859983, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:159859973..159859983, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.60e-90 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.60e-90 | 42 |
defensive cell | 4.93e-78 | 48 |
phagocyte | 4.93e-78 | 48 |
monopoietic cell | 1.18e-66 | 59 |
monocyte | 1.18e-66 | 59 |
monoblast | 1.18e-66 | 59 |
promonocyte | 1.18e-66 | 59 |
macrophage dendritic cell progenitor | 2.38e-64 | 61 |
myeloid lineage restricted progenitor cell | 5.18e-64 | 66 |
granulocyte monocyte progenitor cell | 5.34e-63 | 67 |
myeloid leukocyte | 6.62e-63 | 72 |
myeloid cell | 1.79e-40 | 108 |
common myeloid progenitor | 1.79e-40 | 108 |
hematopoietic lineage restricted progenitor cell | 5.72e-36 | 120 |
nongranular leukocyte | 7.28e-35 | 115 |
leukocyte | 1.12e-33 | 136 |
hematopoietic oligopotent progenitor cell | 1.12e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-27 | 161 |
hematopoietic stem cell | 2.58e-26 | 168 |
hematopoietic cell | 1.02e-24 | 177 |
mesenchymal cell | 1.04e-09 | 354 |
connective tissue cell | 2.04e-09 | 361 |
motile cell | 2.23e-08 | 386 |
multi fate stem cell | 4.17e-07 | 427 |
somatic stem cell | 6.26e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.62e-55 | 76 |
hematopoietic system | 4.08e-52 | 98 |
blood island | 4.08e-52 | 98 |
bone element | 1.00e-50 | 82 |
hemolymphoid system | 7.26e-47 | 108 |
skeletal element | 7.88e-46 | 90 |
immune system | 3.29e-44 | 93 |
skeletal system | 8.44e-41 | 100 |
lateral plate mesoderm | 1.32e-22 | 203 |
musculoskeletal system | 1.64e-22 | 167 |
mesoderm | 1.13e-12 | 315 |
mesoderm-derived structure | 1.13e-12 | 315 |
presumptive mesoderm | 1.13e-12 | 315 |
connective tissue | 5.15e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.04e-07 | 1 |
skin benign neoplasm | 2.04e-07 | 1 |
integumentary system benign neoplasm | 2.04e-07 | 1 |
dermis tumor | 2.04e-07 | 1 |
cutaneous fibrous histiocytoma | 2.04e-07 | 1 |
anemia | 2.17e-07 | 1 |