FFCP PHASE1:Hg19::chr1:192578548..192578577,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:192578548..192578577,+ to FFCP PHASE1:Hg19::chr1:192578548..192578577,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:192578548..192578577,+ | |||
|coexpression_cluster_id=C537 | |||
|description=CAGE_peak_at_chr1:192578548..192578577,+ | |||
|id=chr1:192578548..192578577,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.24e-74!140;CL:0000037!3.07e-74!172;CL:0000566!3.07e-74!172;CL:0000988!1.29e-68!182;CL:0002032!8.17e-67!165;CL:0000837!8.17e-67!165;CL:0002057!8.25e-65!42;CL:0002031!7.40e-63!124;CL:0000860!3.78e-62!45;CL:0000763!7.79e-58!112;CL:0000049!7.79e-58!112;CL:0000557!5.75e-57!71;CL:0000766!9.13e-57!76;CL:0002087!4.62e-56!119;CL:0000839!7.52e-55!70;CL:0002009!5.07e-51!65;CL:0002194!8.11e-48!63;CL:0000576!8.11e-48!63;CL:0000040!8.11e-48!63;CL:0000559!8.11e-48!63;CL:0000134!8.92e-23!358;CL:0002320!8.18e-22!365;CL:0000219!1.94e-18!390;CL:0000034!1.62e-14!444;CL:0000048!1.90e-14!430;CL:0000723!6.90e-14!436;CL:0002393!2.86e-13!9;CL:0002397!2.86e-13!9;CL:0000838!1.15e-09!52;CL:0000542!2.28e-09!53;CL:0000051!2.28e-09!53;CL:0000451!3.79e-09!10;CL:0002274!1.47e-08!5;CL:0000457!1.47e-08!5;CL:0002191!1.47e-08!5;CL:0000097!1.47e-08!5;CL:0000831!1.47e-08!5;CL:0002028!1.47e-08!5;CL:0000453!1.85e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.66e-77;33!CL:0002057;5.66e-77;33!CL:0000473;4.88e-55;39!CL:0000234;4.88e-55;39!CL:0000576;7.19e-45;48!CL:0000766;9.01e-37;69!CL:0000763;3.19e-17;100!CL:0000738;5.59e-15;136!CL:0002087;9.42e-15;104!CL:0000784;2.27e-11;3!CL:0000767;4.53e-11;3!CL:0000097;9.96e-11;5!CL:0000988;1.06e-08;177!CL:0002393;1.15e-08;6!CL:0002397;1.15e-08;6!CL:0001014;1.62e-08;2!CL:0001016;1.62e-08;2!CL:0000451;4.74e-08;10!CL:0000094;4.92e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.97e-82,42;CL:0002057,9.97e-82,42;CL:0000766,3.15e-77,72;CL:0000557,9.50e-76,67;CL:0000473,8.74e-75,48;CL:0000234,8.74e-75,48;CL:0000839,1.03e-68,66;CL:0002009,1.14e-67,61;CL:0000738,3.08e-67,136;CL:0002194,6.44e-62,59;CL:0000576,6.44e-62,59;CL:0000040,6.44e-62,59;CL:0000559,6.44e-62,59;CL:0002031,4.83e-57,120;CL:0000763,1.33e-56,108;CL:0000049,1.33e-56,108;CL:0000037,1.50e-54,168;CL:0000988,3.41e-51,177;CL:0002032,2.28e-50,161;CL:0000837,2.28e-50,161;CL:0002087,1.01e-46,115;CL:0000134,1.09e-19,354;CL:0002320,4.50e-19,361;CL:0000219,6.63e-17,386;CL:0000034,3.16e-15,441;CL:0000048,2.98e-14,427;CL:0000723,6.93e-14,433;CL:0000784,2.19e-11,3;CL:0000767,4.70e-11,3;CL:0000097,9.10e-11,5;CL:0002028,9.10e-11,5;CL:0001014,1.65e-08,2;CL:0001016,1.65e-08,2;CL:0000451,4.71e-08,10;CL:0000094,4.43e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-59;42!CL:0000049;1.49e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.59e-51!102;UBERON:0003061!6.59e-51!102;UBERON:0002371!1.18e-50!80;UBERON:0002193!3.79e-46!112;UBERON:0001474!6.92e-46!86;UBERON:0002405!5.91e-38!115;UBERON:0004765!1.85e-36!101;UBERON:0001434!1.85e-36!101;UBERON:0002384!3.43e-21!375;UBERON:0002204!3.28e-16!167;UBERON:0003081!9.77e-15!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.05e-65,76;UBERON:0001474,3.22e-60,82;UBERON:0004765,4.99e-54,90;UBERON:0002405,5.59e-52,93;UBERON:0002390,1.44e-51,98;UBERON:0003061,1.44e-51,98;UBERON:0001434,1.13e-47,100;UBERON:0002193,6.88e-46,108;UBERON:0002204,1.26e-24,167;UBERON:0003081,9.56e-20,203;UBERON:0002384,3.11e-18,371;UBERON:0000926,3.05e-09,315;UBERON:0004120,3.05e-09,315;UBERON:0006603,3.05e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27915072188527,2.29881650459848,2.91229890860613,3.14691421479123,5.37361157336098,2.78669021968937,0,0,0,0,0.142169232487422,0.587200878669695,1.66198622559563,2.20598892217156,1.73608696572681,0,0,0,1.01778767145695,4.53451132426571,1.69808842831471,2.55671940596253,21.3807301771349,19.5115013663915,1.7261543539329,11.5272317938095,10.6417003449863,2.06847408441971,20.6555098746824,13.5426486594342,4.32957380947991,15.8285567033551,12.8092386133698,6.73384563215986,29.2045414639245,14.7047538933779,0.659702600373432,2.59302754908121,2.13112375266347,2.03146467040009,3.97169657283798,1.24564449799115,4.52247597462138,7.30076085788282,10.6422533905507,1.21079900526674,5.52416453981347,3.48108626184973,1.26753171787165,0.425208599930087,0.838634582033504,0.561643155732475,0.150176892841506,0.48217676009124,0.855038231223746,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,3.96513985737078,7.28661131875997,0,0.196709770113833,1.17903228824749,0,0,0.651844533267181,0.473447805734733,1.94826728407911,0,1.17842362989935,0,0.812411591295047,0,0.260118695119756,0,0,0,0.296573126324121,0,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.403213486449465,1.60464117470104,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,4.76981248610684,5.71994910780128,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,2.95597942737566,0.264145302039678,1.65862492432618,2.59415916150531,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.788123040807709,2.80315847317372,1.66845947163673,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,2.80428461064202,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0.59873811429845,0.191505370132367,2.96343015813436,0,0.280797178113459,0.456469358066384,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0.470940769185074,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,26.5469192030771,6.1904156364636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.797189041880179,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0.799529247399431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0.217716747896961,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27915072188527,2.29881650459848,2.91229890860613,3.14691421479123,5.37361157336098,2.78669021968937,0,0,0,0,0.142169232487422,0.587200878669695,1.66198622559563,2.20598892217156,1.73608696572681,0,0,0,1.01778767145695,4.53451132426571,1.69808842831471,2.55671940596253,21.3807301771349,19.5115013663915,1.7261543539329,11.5272317938095,10.6417003449863,2.06847408441971,20.6555098746824,13.5426486594342,4.32957380947991,15.8285567033551,12.8092386133698,6.73384563215986,29.2045414639245,14.7047538933779,0.659702600373432,2.59302754908121,2.13112375266347,2.03146467040009,3.97169657283798,1.24564449799115,4.52247597462138,7.30076085788282,10.6422533905507,1.21079900526674,5.52416453981347,3.48108626184973,1.26753171787165,0.425208599930087,0.838634582033504,0.561643155732475,0.150176892841506,0.48217676009124,0.855038231223746,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,3.96513985737078,7.28661131875997,0,0.196709770113833,1.17903228824749,0,0,0.651844533267181,0.473447805734733,1.94826728407911,0,1.17842362989935,0,0.812411591295047,0,0.260118695119756,0,0,0,0.296573126324121,0,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.403213486449465,1.60464117470104,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,4.76981248610684,5.71994910780128,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,2.95597942737566,0.264145302039678,1.65862492432618,2.59415916150531,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.788123040807709,2.80315847317372,1.66845947163673,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,2.80428461064202,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0.59873811429845,0.191505370132367,2.96343015813436,0,0.280797178113459,0.456469358066384,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0.470940769185074,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,26.5469192030771,6.1904156364636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.797189041880179,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0.799529247399431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0.217716747896961,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | ||
|short_description=p@chr1:192578548..192578577,+ | |||
}} | }} |
Latest revision as of 01:40, 28 July 2015
Short description: | p@chr1:192578548..192578577, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:192578548..192578577, + |
Coexpression cluster: | C537_immature_CD14_migratory_Mast_CD4_Dendritic_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.05e-65 | 76 |
bone element | 3.22e-60 | 82 |
skeletal element | 4.99e-54 | 90 |
immune system | 5.59e-52 | 93 |
hematopoietic system | 1.44e-51 | 98 |
blood island | 1.44e-51 | 98 |
skeletal system | 1.13e-47 | 100 |
hemolymphoid system | 6.88e-46 | 108 |
musculoskeletal system | 1.26e-24 | 167 |
lateral plate mesoderm | 9.56e-20 | 203 |
connective tissue | 3.11e-18 | 371 |
mesoderm | 3.05e-09 | 315 |
mesoderm-derived structure | 3.05e-09 | 315 |
presumptive mesoderm | 3.05e-09 | 315 |